Oncorhynchus tshawytscha (Chinook salmon): 112263656
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Entry
112263656 CDS
T05605
Symbol
sec23b
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112263656 (sec23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112263656 (sec23b)
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112263656 (sec23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
112263656
NCBI-ProteinID:
XP_042159844
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Position
LG02:71215080..71229841
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AA seq
766 aa
AA seq
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MATYQEFIQQNEDRDGVRFSWNLWPSSRLEATRLVVPVSCLFTPLKERPDLPPVQYEPVL
CSRANCKAVLNPLCQVDYRAKIWACNFCFQRNPFPPSYAGISDVNQPAELMPQFSTIEYI
VQRGPPNPLIFLYVVDTCLEEEDLQALKESLQMSLSLLPPNALVGLITFGRMVQVHELSC
EGIAKSYVFRGTKELSSKQIQEMLGLTNPSATGPQGRPAAPQDPAVTCRFLQPVHKVDMN
LTDLLGELQRDPWPVPQGKRPLRSTGIALSIAVGLLEGTFPNTGARVMMFMGGPPTQGPG
MVVGDELKTPIRSWHDITKDNARHLKKATKYYDALANRAASNGHSIDIYACALDQTGLLE
MKCLSNLTGGHIAMGDSFNTSLFKQTFQRVFSKDHNGEFRMAFGGTLEVSTSRELKVSGA
IGPCVSLNAKGPCISENEVGVGGTTQWKICSLSPSTTLALYFEVVNQHNAPIPQGGRGAV
QFVTQYQHSNTQRRIRVTTVARNWADAQSQIQHIESSFDQEASAVIMARLGVFRAESEEG
PDVLRWLDRQLIRLCQKFGQFNKDDPTSFKLSESLSLYPQFMFHLRRSPFLQVFNNSPDE
CSYYRHHFVCQNLTQSLIMIQPILYSYSFHGPPEPVLLDSGSILPDRILLMDTFFQLVIY
HGETIAQWRKAGYQEQPEYENFKHLLVAPVDDAQEILQTRFPMPRYIDTEHGGSQARFLL
SKVNPSQTHNNLYSWGQETGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcgacataccaggagtttatccaacagaatgaggatcgggacggcgtgcgctttagc
tggaacctgtggccctcgagcaggctggaagctacccggctggtagtgcctgtctcctgc
ctcttcaccccactcaaggagaggccagacctgccaccggtgcagtacgaaccggtcctc
tgtagcagggccaactgcaaggccgtactaaacccgctatgccaagttgactacagagcc
aaaatatgggcgtgcaacttctgcttccaaagaaacccattccccccgtcatacgctggc
atctcggacgtaaaccagccggctgagctcatgccacagttctcaaccattgagtacata
gtgcagcgcggccccccgaaccccctcatcttcctgtacgtggtggacacgtgtctggag
gaggaggacctgcaggccctgaaggagtccctgcagatgtccctgtccctgctgcccccc
aacgccctggtcggcctcatcaccttcggacgcatggtgcaggtccacgagctgagctgc
gagggcattgcaaagagctacgtgttcagaggaaccaaggagctttcctccaaacagatc
caggagatgctaggcctgacgaacccatcggcaactgggcctcagggtcgtcccgcggcc
cctcaggatccagccgtcacctgtcggttcctgcagccggtccataaggtagacatgaac
ctgacagacctgttgggagagttgcagagagacccctggcctgtaccacaggggaagaga
ccactgcggtctactggaatagcactgtccatcgccgtgggcctgctggagggtacgttt
cccaacacgggggcccgtgtgatgatgttcatgggcggaccccccacccagggccccgga
atggtggtgggagatgaactcaagacccccatccgctcctggcatgacatcaccaaggac
aacgcacggcatctgaagaaagccaccaagtactacgacgccttggcgaaccgtgcggca
tcaaacggccacagtattgacatctacgcctgtgccttggatcagaccggacttctagag
atgaaatgtttatccaacctcactggaggtcacatagcgatgggcgactccttcaacacc
tctctgttcaagcagaccttccagagggtgttcagtaaggaccacaacggagagttccgc
atggccttcggaggcacgctggaagtcagtacgtccagggagctgaaggtatcgggggcc
atcgggccctgtgtctccctcaacgctaagggaccgtgtatatcagagaacgaggtcggt
gttggaggaacaacccagtggaaaatctgcagtctcagtccctccacgacgttggccttg
tacttcgaggtcgtcaatcagcacaacgccccaatccctcagggtggtagaggagcggtc
cagtttgtcacccagtaccaacactccaacacccagaggaggatcagggttaccaccgtc
gccaggaattgggccgacgcccagtcccagatccagcacattgagtcatccttcgaccaa
gaggcgtcggcggtcatcatggccaggctgggcgtgttcagggccgagtcggaagagggg
ccggacgtcctgcgctggctggacagacagctcattcgcctgtgtcagaaattcggtcag
ttcaacaaagatgaccccacctccttcaagctctcggagtccctctcactctacccacag
tttatgttccacctgcggcggtcgccgttcctgcaggtgttcaacaacagcccagatgag
tgttcctactacagacaccactttgtctgccagaacctgacccagtctctcatcatgatc
cagcccatcctgtactcttactcgttccacggaccaccagagcctgttctcctggacagt
ggcagtattctcccagaccggatcctcctcatggacaccttcttccagctggtcatctac
catggagagaccatcgcccagtggcgtaaggcgggttaccaggagcagccggagtacgag
aacttcaagcatctactggtagcacctgtggatgacgcccaggagatcctgcagacccgg
ttccccatgccccggtacatcgacacagagcacggaggctcccaggcccgcttcctcctg
tccaaggtcaacccctcccagacacacaacaacctctactcctggggacaggagaccgga
gcccccatcctcacagacgacgtcagtctacaggtgttcatggaccacttgaagaagctg
gccgtgtcaagcgccgcttaa
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