Oncorhynchus tshawytscha (Chinook salmon): 112263691
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Entry
112263691 CDS
T05605
Symbol
nfat5b
Name
(RefSeq) nuclear factor of activated T-cells 5 isoform X1
KO
K17335
nuclear factor of activated T-cells 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112263691 (nfat5b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
112263691 (nfat5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
112263691
NCBI-ProteinID:
XP_042176961
UniProt:
A0AAZ3RRA5
LinkDB
All DBs
Position
LG04:63066012..63118733
Genome browser
AA seq
1374 aa
AA seq
DB search
MPSDFISLLSADLDLNSPKSLYSKESVYDLLPKELQLPSSTQQNPTAAMSQKSGGEAVPP
PSAALDSDATTVSSSMTMGGPRSAFPTSSSSTMHSSTSATDHTSAHTGIAAPDEGVSSRA
VAEMLGAEGGTGNSGSTGGGRAGGEKGGGAGSLGGGGRGGASQEAQQHHQMTPSKRRTVL
NISPPPEDLFDDSRMSCQEDQLQDSELSNSIWMDDSASNFSIVSSSSYNDNTEVPRKSRK
RTPRQRPGPKPASAEEASMDVFDADSAKGPHFVLSQLGSDSKACTKGSSADGSQTTHQKC
GTLASQFPQKSECKELKILVQPETQHRARYLTEGSRGSVKDRTQQGFPTLKLEGVNEAVV
LQVFVGNDAGRVKPHGFYQACRVTGRNTTACKEVDIEGTTVIEVSLDPSNNMTLAVDCVG
ILKLRNADVEARIGVAGSKKKSTRARLVFRVNISRPDGSVLTLQTPSSPILCTQPAGVPE
ILKKSLHSCSVRGGEEVFIIGKNFLKDTKVIFQENVSDEKCWKAEAEIDMELFHQNHLIV
KVPPYQNPAIASAVCVGIYVVTNAGRSHDVQPFTYTPEPVDISVKKEVPSPGKPCPFDQR
MKVIDGALMPPMLPLVKREEVTPMEVSSNLPSAGVFKQTPDVMCSAQQTLDMSSNLPPNN
SPFSNSLPRPAKDPAESQTAVFNSAEALSTIQKQDIALTNSFPVPADSLLQTGPQQFLLE
PREGLGQDRAGNNAGAVGRLSQQVEAPQPAPQQHQLPIFPPDEVAQLEQAVRQLQAKGYC
SQQQQRQQQQIQQQQIQQQQQQQIQQQQQLQQQQLQQQQQIQQQQVQQQQVQQQQVQQQQ
VQQQQIQQQQIQQQQIQHQQIQHQQIQHQQQQQHVLENLRQELFKSQMPMQCDIFQGGSL
GENTEQQGSQQGMVQNHGSLFQQAQQQQRQQQKQQQQAALFQQANELLSIQTNFLHQTPS
HPSPPLFHNPSPLAEAQDPQGALFHTQKASPTQEQVQATLFQNTLTVLSRTSLSPEQPPS
AANLFLPQSALPGQLSASGSQQQQLAFLSALQTSAPEPQSVFQAQTQLSPIQQGTPMEQQ
QPPQPQPPQQNSMFQNISPHPPANTLSQTQQQQAGLLFCSKHLSTPEQPPSLLFSGQGQM
PPMSSSSLNSQEPQNPSMLFSQANMVTVSQQESSEPMAFQDQSQVVGNPSEPRHHSLFQE
QQPMQLITNSNNGPEQPVSLFMPQSNMSALQACMAARELPQTGIFSTQNGVAGLQTTTSS
PVQQPGSLFQTAVSGSLNQPSEAQQPGLFLFGIQNECGQLITSPGTTLSDQIIAISQSGQ
NQRESEAQIQSLLNQSMSESGSMQNSMTASQNMEKIDDLLVSLQEQGNNLTRSY
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgattttatatccctactcagcgcggatctcgacttgaattcccccaaatcc
ctatattccaaagaatcagtgtatgaccttctacccaaagagctgcagctgccatcctcc
actcagcaaaacccaacagcagccatgagccagaagagcggtggagaggcagttcctcct
ccctcagctgcccttgactcagatgccaccaccgtctcctcttctatgaccatgggaggc
cctcgcagtgcttttcccacctcttccagctccaccatgcactccagtacttcagccacc
gaccacacctctgctcataccggcatcgccgctccagacgaaggtgtaagtagcagagcg
gtggcggagatgcttggcgccgagggcgggactggcaacagtgggagtactggtggcgga
agggctggcggcgagaaaggaggaggggctggatccctaggtggaggaggaagagggggg
gcatcccaggaggcccagcagcaccaccagatgaccccttccaagcggcgcacggtgctg
aacatctcgcctccgcccgaggacctgtttgacgacagccgcatgtcctgccaggaggat
cagctccaggactccgagctgagcaacagcatctggatggatgactccgcctccaacttc
agcatcgtcagctccagctcctacaacgacaacacagaggtgccccggaagtcgcgcaag
cgcaccccccgccagcgacccgggcccaagcctgcctcggccgaggaggccagcatggat
gtgtttgatgcagacagtgccaaaggtcctcactttgtgctctcacagctgggctcagac
agcaaggcctgtaccaaaggaagttcggcagatggctcccaaacaacccatcagaaatgt
gggaccctagcgagccagttccctcagaagagtgagtgcaaggagctgaagatcctggtc
cagcctgagacccagcacagagcccgctacctgactgagggcagcagggggtcagtgaag
gaccgcactcagcagggcttccctaccctaaagctggagggtgtgaatgaggcagtggtg
ctgcaggtgtttgtgggtaatgacgctgggcgtgtgaagccacatgggttctaccaggcc
tgcagggtgacggggcgcaacactacagcctgcaaggaggtggacatagagggcaccact
gtcattgaagtgtccctggaccccagcaataatatgaccctggcggtggactgtgtgggg
atcctgaaactgcgtaacgctgatgtggaagctcgtatcggggtggccggctccaaaaag
aagagcacgcgtgccaggctggtgtttcgggtcaacatctccaggccggacggctcggtg
ctcacgttacagacaccgtcgtcccccatcctgtgcacccagcctgcaggggtgcctgag
attctgaagaagtccctccacagttgctcggtgagggggggtgaggaggtcttcatcatt
gggaagaacttcctcaaggacaccaaagtcatattccaggaaaatgtatcagatgagaag
tgttggaaggcagaggctgaaattgacatggagctgtttcaccagaatcacttgattgtg
aaggttcctccttaccagaacccagccatcgcgtctgcagtgtgtgtgggaatctacgtg
gtgaccaatgctggccgatcccacgacgtgcagccttttacatacactccagaaccagtg
gacatatctgtgaagaaagaagttccatctccaggcaagccctgcccttttgatcaacgg
atgaaagtaattgatggtgccttgatgcccccaatgttgcctcttgtgaagagagaagag
gtcactccaatggaggtctccagcaacctcccttctgctggcgtgttcaagcagaccccc
gatgtcatgtgttccgcccagcagacgctggacatgagttctaaccttccccccaacaac
agcccgttctccaactccttgccgcggcctgccaaggaccctgccgaatcccaaacagca
gtcttcaacagtgcagaggccctgagcaccatacagaagcaggacattgcactcaccaac
tccttccccgtgcctgcagactctctactccaaactgggcctcagcagttcctcctggag
cccagagaggggcttggtcaggacagggctggcaacaatgctggggcggtagggaggctc
agtcaacaagtggaggcccctcaacctgccccccagcagcaccagctgcccatattcccc
ccagacgaggtggcccaactggaacaagcagtgagacaactgcaggcaaaagggtactgc
agccagcagcaacagcgacaacagcaacaaattcaacaacaacaaattcagcaacaacag
cagcaacaaattcagcaacaacagcaactacagcaacagcaactacagcaacaacaacag
attcagcagcaacaggttcagcagcaacaggttcagcagcaacaggttcagcagcaacag
gttcagcagcaacagattcagcagcaacagattcagcagcaacagattcaacaccaacaa
attcaacaccaacaaattcaacaccaacaacagcaacagcatgtgttggagaacctgcgg
caggagctgtttaaatcacagatgccaatgcagtgtgacatatttcagggcggttctcta
ggtgagaacactgaacagcagggttcccagcagggcatggtgcagaaccatggttccctc
tttcagcaggcccaacagcagcagaggcaacaacagaaacagcagcagcaagcagcactc
tttcagcaagccaatgagctcctgtccattcagaccaacttcctccatcagaccccttct
catccctctccacccctcttccataatcccagccccctggctgaggcacaggacccacag
ggggcgctgttccacactcagaaggcctctcccacccaggagcaggtccaggcaaccctc
ttccagaacaccctgacagtgttgagtaggaccagcctctccccagagcagcccccctct
gccgccaacctgttcctcccccagagtgccctgcctggtcagctctccgctagtggcagc
cagcagcagcagctggccttcctcagtgccctgcagacctctgcccctgagccccagtca
gtgttccaggctcagacccagctttctcctatccagcaggggacccccatggagcagcag
cagcccccccagcctcagccacctcagcagaattctatgtttcagaacatctcccctcat
ccacctgcaaacactctctctcagacccagcagcagcaggctggcctactgttctgcagc
aaacacctctccactccagagcagccccccagtctgctgtttagtggccagggccagatg
ccccccatgagcagcagcagcctgaactctcaggagccccaaaacccctccatgctgttc
tctcaggccaacatggtgactgttagccagcaggaatcctctgagcccatggccttccag
gaccagagccaggtggtggggaacccctcagagcctcgccatcacagcctgttccaagag
cagcagcccatgcagctgatcaccaactccaacaacggcccagagcagcccgtctctctc
ttcatgccccaatccaacatgtctgccctgcaggcttgcatggctgcccgggaactcccg
cagacaggcatcttcagcactcagaatggggtggcaggcctgcagaccaccacctcctcc
cccgtacagcagccagggtctctgttccagacagcagtcagtgggagcctcaaccagccc
agcgaggcccagcagccaggcctcttcctctttgggattcagaatgagtgtggccagctg
ataacctctcctggaaccactctgtctgatcagatcattgccatcagtcagtctggtcag
aaccagagagagagcgaggcccagatccagtcgctgctcaaccagtccatgtctgagtca
gggagcatgcagaacagcatgaccgcctcccagaacatggagaagatagatgacctgctt
gtcagcctgcaggagcagggcaacaacctcactcgctcctactag
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