Oncorhynchus tshawytscha (Chinook salmon): 112263750
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Entry
112263750 CDS
T05605
Name
(RefSeq) meiosis regulator and mRNA stability factor 1 isoform X1
KO
K17573
meiosis arrest female protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112263750
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112263750
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MARF1_LOTUS
OST-HTH
RRM_MARF1
NYN
RRM_1
RRM_5
DUF7923
Motif
Other DBs
NCBI-GeneID:
112263750
NCBI-ProteinID:
XP_024296081
LinkDB
All DBs
Position
LG02:71770020..71793021
Genome browser
AA seq
1822 aa
AA seq
DB search
MMEGLGKERSICSSRPFPWLSHPEKEASSRLWKLTDCFSTSEQQNTPSYDTDKQNDYMDN
RKPVLELKDLPPPPHHTAASQPFPLAPLPLPPPCLPPLPQDSLQQLQHQGGSPKVSVCTH
CEHCSKDPLGRGGYGVVSGGGSASSGGGVSSGVPLYLPPSSQEASFSRLGASQITPTTLN
SHPHFPSLGGGDARATLLPSGSYKLHIPSVDTTSQPLPFQSHSHLPCSCRTGGLLRPLHS
YPSIPLPYNESKFNTTSAPHHRTCNLGTPAGYYPCGGDYNPATLGVQRSLAAHSDPHIPT
SGHICSSNAMHFNLERTVCSTGAHYCRDCLTKPADKLWPNIPLPLAQSVSVPIPVCNGCG
TSSDGLLLLGSSLGKSATKYGSPEGPENIPPVGVFWDIENCCVPSGRSAAAVVQRLRSHF
FQGHREAEFICVCDISKENKAVIQELNNCQVTVAHINATAKNAADDKLRQSLRRFAETHT
APATVVLVSSDVNFASELSDLRHRHGFQVNLVHKSGQTSDALLQHAHRHVAFEEMVADLP
PRQAVKSQLGFNLLYVYNLPPGCDGKSVGNRLRRLSDNCGGKVLGVSMATGTAVLRFGSQ
EAAERARKRMENEDVFGRRITLSFSAPSTEGNDPTPPPPSSETPPPPPVQPLPSSSFSFL
PLEKLRSPRRKRRARRECQRERESSLPLSVPVPERPYSPRRGSGGTPFPVPPQTRTLPQE
LGGLETKPKIGGFPLEKGQRNSSPHSNGEGPSQQHPIKAGLIGESMFSCRRRDLSSPCSA
SDSERHVDRSSGEFQVSTPSAFSKLTLHKTFSASVLPQPQGLSQGSWSSRSGSPCMSSRS
SPLIGPPPWGSSSPCLPVGPQASEPFSDGADLQVANLDYRMSRKELQQSLHDAFSRHGQV
KGVELSPHTDYQLKATVQMVSLQQAISAVSSLHRYKIGSKRIHVSLITGAGNKFLAMLRS
EIFQILQDAPASCLPLFKFTEIYEKRFGRKLVVSDLYRLQEVVAVREQGGGRLVCLLPSS
QTRQSPLGSSQSQEGSSANGSPVVFEQLEYHEPVCSYHYTQQNFSEADFDPDSYKIPFVV
VSLKTLASQVHCLLQSHEGTLPLLSFSECYASELGPLAVSEEGEEEGSVPLEHLITCIPG
INIVTAQNGFKVIKWIHNKPPASNTDQWMQRCKSPVGNPQLIQFSRELIDLMKGQPCNLM
PISKFIPAYHHHYAKQCRVSDYGYSKLLELLEAVPHVLQILGMGTKRLLTLTHRAQVKRF
TQDLLKLLKFQASKQVTVTDFMQAYHWCFSRDWQVLDYGMCDLMDLLAEIPDTTITITHQ
DLDTVISVPKRDRTSDEMERTKQFGKEVVDLLRHQPHCRMAFSKFIPTYHHHFGRQCKLA
YYGFTKLMELFEAIPDVLVVLECGEEKVLTLTEVERVKALAAQLVKMLRSQRDSSLPAAQ
LLSEYSKTFGYGLRLQDYDVSSLPALLVKLCHVVKVVDGTNGREVQLINRKSLRSLTCQL
LSLLMGLGQHEGDGSVSVEGLSLLYHSVHGVQLNPCEYGFLSLSELLKSLPYLVELFYGE
GEEEGERGEERVRLTRLYQFARRVRALLHTYHYHQIFLTEFPGAYAKFTGHGLQPRSYGY
GSVDDLLNAIPQVVWIKGHGHKRIIVLKNDMKAARATGASPAASEEPEDGTSQRDSPCSN
TESGTHSPGVGGVEMELLCLTSPVDLLCGPVPSCLPSPQLHPDPVLQQADLIHFEQTPSP
AELDKPEEEAVAEQEVAAPAVCDTSEPIELLTDQNVVVLVSTTTKPPQNVTRKIASIENS
PIKRTPRNKVKLAANFSFTAAP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggactgggaaaggagagatccatatgcagttctaggcccttcccatggctc
agtcatcccgagaaagaggcctcgtcccggctctggaaactcacagactgcttctccacc
tccgagcagcaaaacaccccaagttacgacacagacaaacaaaacgattacatggacaac
agaaagccagtattggagttgaaagatctgcctcctcctccgcatcataccgctgcctcc
cagcccttccccctcgcccccctccctctgccccccccctgtctgcctcctcttccgcaa
gactccctccaacaactacaacaccaggggggtagtcccaaagtaagcgtgtgcactcac
tgtgagcactgcagcaaagacccattaggtcgtggtggttatggggttgttagtggtgga
ggtagcgctagtagtggtggaggtgtcagcagtggtgtcccactctacctccctccaagt
tctcaggaagcctctttcagcaggctaggagccagtcaaataacgccaaccaccctcaac
tcacacccgcacttccccagccttggtggaggggatgccagagccacgctactcccctct
gggagctacaagctccacatcccctctgtagacaccacgtcccagcccctaccctttcag
tctcactcccacctaccatgctcctgccgtacaggaggccttctcagacctctccactct
tacccctccatccctttaccctacaacgagtctaaattcaataccacctccgccccccac
cataggacttgtaacctgggtactcccgctgggtattacccctgtggtggtgattacaac
cctgccactctgggggtccagagatcattggcagcacacagtgacccccacatacccacc
tcgggacatatctgttcttctaatgctatgcacttcaatcttgaacgcacagtttgtagc
acgggggcgcactactgccgggattgtttgacgaagcctgcagacaagttgtggcctaac
attcctctgcccctggcccagtcggtctctgtgcccatccctgtgtgtaacggctgtggg
acctcctccgatggcctgctactgctgggttccagcctgggcaaatctgcaacgaagtat
ggttctccagaaggtcctgagaacatccctccggtgggtgttttctgggacatcgagaac
tgctgcgttcccagcggtcgctctgctgcagctgtggtccagcgcctccgcagccacttc
ttccagggccacagagaggcagagttcatctgcgtctgtgacatcagcaaggagaacaag
gccgtcatccaggagctgaacaactgccaggtgacggtagcgcacattaacgctaccgcc
aagaacgctgcggacgacaagcttcgtcagagcctgcggcgctttgcagaaacacacact
gcccctgctactgtggtgctagtctcctccgacgtgaactttgccagcgagctgagtgac
ctccggcatcgccatggtttccaggtgaaccttgtccataagagcggtcagacgtcggac
gccctgctgcagcacgcccaccgccacgtagcctttgaagagatggtagccgacctgccg
cccagacaggctgtcaaatcacagctcggtttcaacctgctctatgtgtacaacctgccg
ccgggctgtgacggcaagagcgtgggcaaccgcctgcgccgcctctcggacaactgcggg
ggcaaggtgcttggcgtctccatggccactggcaccgccgtcctccgcttcggctcgcag
gaagcggcggagcgtgcccgcaagcgcatggagaacgaggacgtgttcggccggcgcatc
accctctccttctcagctccgtccactgaggggaacgacccgaccccaccaccaccctca
tctgagactccacctccgcctccagttcaacctcttccctcctcctctttttccttcctt
cccctggagaagctgcgctcccctaggaggaaaaggcgtgcgaggcgtgagtgtcagaga
gagagggaatcctcgctccccctctccgttccggtgcctgagaggccctacagccccagg
agggggagcggggggacacctttccccgttcccccccaaaccagaacccttcctcaggag
ctaggtggactggagaccaagcccaagattgggggtttccccctggagaaaggccagcgc
aactcctccccccacagtaacggagaggggccgtcccagcaacaccccatcaaggccggc
ctcataggagagtctatgttcagctgcaggaggagggacctctccagcccctgcagtgca
tcggactctgagcgtcatgtggaccggagctctggagagttccaggtcagcaccccctct
gccttcagcaagctgaccctgcacaagacctttagcgcctcggtcctcccccagccacag
ggcctctcccaaggctcctggtcctcacggagtggatccccctgcatgtcgagccgctcc
tcccctctaataggccctcctccctggggcagcagcagcccctgtctgcctgtgggccca
caggcctcggagcccttctcggacggggcagacttacaggtggccaacctggactacagg
atgtcccgtaaggagctgcagcagagcctgcacgacgccttctccagacacggacaggtt
aaaggcgtagagctgagtccccacacagactaccagctgaaagccaccgtccagatggtc
tccctacagcaggccatcagtgctgtgagcagcctgcaccgctacaagataggaagcaaa
cgcatccacgtctccctcatcaccggggccggcaacaagtttctagccatgctccgctct
gaaatcttccagattctccaggacgcgccagccagctgtcttccccttttcaagttcact
gaaatctacgagaaaagatttggtcgtaagctggtggtgagcgacctatacagactacaa
gaggttgtggcggtgagggagcagggtggaggcaggctggtgtgtctcctccccagtagc
cagaccaggcagagccctctggggtcgtctcagtcccaggaggggtcctcggctaatggt
agtcctgtggtgtttgaacagttggagtaccacgagcctgtctgcagttaccactacacc
cagcagaacttcagtgaggcagactttgacccagactcgtataagattccttttgtggtg
gtgtctctgaagaccctggcctcccaggtccactgtctgctacagtcccatgagggaacc
ctgcccctgctcagtttctcagagtgctatgcgtcagagttgggccccctggcggtgtct
gaagagggggaggaggaggggagtgtccccttggagcaccttatcacctgtataccaggc
attaacatcgtcactgctcagaacggcttcaaggtcatcaagtggatccacaacaagcca
cccgcatccaacacagaccagtggatgcagcggtgcaagtccccggtggggaacccccag
ttgatccagttcagtagagagctcattgacctgatgaagggtcagccctgcaacctgatg
cccatcagcaagttcatacctgcctaccaccaccactatgccaagcagtgtagggtctct
gactacggatactctaagctgctggagctactggaggctgtgcctcacgtactgcagatc
cttggcatggggaccaagcgtctgctgaccctgacccaccgtgcccaggtgaagagattc
acccaggacctcctcaaactgctcaagttccaggccagcaaacaggtgaccgtcacggac
ttcatgcaggcctaccattggtgcttctccagagactggcaggtgctggactatgggatg
tgtgatctgatggacctgctagctgagatccctgacaccaccatcaccatcacacaccag
gacttggacactgtcatctctgtacccaagagagatcgtacatcagatgagatggagcgg
accaagcagtttggtaaggaggtggtggacctactgcgtcaccagccccactgtcgcatg
gccttctccaagttcatccctacctaccaccaccacttcggacgccagtgcaaactcgcc
tactacggcttcaccaagctcatggagctcttcgaggccatccccgacgtactcgtggtg
ttggagtgtggagaggagaaggtgctgaccctaacagaggtagagcgtgtgaaggccctg
gctgcccagctggtcaagatgctccgttcccagagagactccagcctgcctgctgcccag
ctactgtctgagtatagcaagacctttggctacggcctgaggctccaggactacgatgtc
tcctccctgcctgccctgctcgtcaagctctgccacgtcgtcaaggtggtggatggcact
aacggccgtgaggtccagctgatcaacaggaagtctctgcgctcgttaacgtgccagctg
ctgtccctgctgatgggcctggggcagcacgagggagacggctccgtcagcgtggagggc
ttgagtctgctgtatcattctgtacatggggtacagctcaacccctgtgaatacggcttc
ctctcgctcagcgagctgctgaagagcctgccttacctggtggagctgttctacggtgag
ggtgaggaggaaggcgagcgtggcgaggagagagttagactcacccgtctgtaccagttt
gcccgtagggtgcgtgccctgctccacacctaccactaccaccagatcttcctaacggag
ttccccggggcctacgccaagttcaccggacacggcctccaacctcgctcctacggctac
ggcagcgtagacgacctgcttaacgccataccacaggtagtgtggatcaaagggcatggc
cacaagaggattatcgttttgaagaacgatatgaaagcagctcgagccactggagccagc
cctgcagcttcagaggagcctgaggacgggaccagccagagagacagcccctgtagcaac
acagagtctggaactcacagcccaggtgttggtggggtggagatggagctgctgtgtctg
acttctccagtagacctgctgtgtggcccagtaccctcctgcctgccctctccccagctg
caccctgaccccgttctccaacaggctgacctcatccacttcgagcagacgccatcacca
gcagagctcgataaacctgaggaggaagctgtagcagaacaagaagtagcagctccggct
gtctgtgacacatctgagcctatagaactactaactgaccagaatgttgttgttttggtt
tctacgactaccaagcctccacagaatgtgacccgcaaaatagcgtccattgaaaacagc
cccatcaagaggactcctcgcaataaagtgaagctggcagctaacttctcttttacagcc
gccccctaa
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