Oncorhynchus tshawytscha (Chinook salmon): 112263789
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Entry
112263789 CDS
T05605
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
otw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112263789
03015 mRNA surveillance pathway
112263789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112263789
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112263789
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
RRM_ACIN1
Nup35_RRM_2
RRM_5
RRM_MUD2_C
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
112263789
NCBI-ProteinID:
XP_024296153
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MAPSPTKRKEEEKSKDRGKEKTATKEGGDKERGREKGHKRRSASTGSSSSSSSSSGSSSG
SSSGSSSSGTSRSGSSRSSSSSSSSSSGSPDPGRRRHDNRRRSRSASKTQKKGDDKERRR
RSPSPKPTKVHLGRLTRNVTKDHIQEIFATYGKIKMIDMPVERLHPNLSRGYAYVEFETP
EEAQKALKHMDGGQIDGQEITTSAVLAPRIRPPPRRQSPPRRMPPPPPMWRRTPPRMRRR
SRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacaaagcgtaaggaggaggaaaagtcaaaggacaggggaaaagag
aagactgccactaaggaagggggggacaaggagagaggcagggagaagggccacaaacga
cgcagtgcatccactgggagcagcagcagctccagcagcagctctggctccagctctggt
tcctccagcggctctagttcctctggcaccagccgctctgggtcttcccggtccagctcc
tccagctcatctagttcctctgggtcacctgacccaggccgccgccgccacgacaaccgt
cgccgctcccgctccgcgtccaaaacacagaagaagggagatgacaaggagcgaaggaga
aggagcccgagccccaagcccaccaaagttcacttaggaagactgaccagaaatgtgacc
aaggaccacatccaggagatctttgccacctacggcaagatcaagatgattgacatgcca
gtggagaggctccacccaaacctgtcccggggctacgcctatgtggagttcgagactcca
gaggaggcccagaaggccctgaaacacatggatggtggtcagattgatggtcaggagatc
accacctctgccgtgttggctccaaggatacgccctccccctcgtagacagtcaccccca
cgcagaatgcccccacctccccccatgtggcgccgcaccccacctcgcatgaggagaagg
tctcggtcaccaaggagacggtccccggtgcgccgacgctccaggtccccggggcgcaga
cgtcatcgttcccgctccagttccaactcctcacggtag
DBGET
integrated database retrieval system
