Oncorhynchus tshawytscha (Chinook salmon): 112263850
Help
Entry
112263850 CDS
T05605
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X2
KO
K16606
leucine-rich repeat-containing protein 49
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112263850
04812 Cytoskeleton proteins [BR:
otw04812
]
112263850
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
112263850
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
112263850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
112263850
NCBI-ProteinID:
XP_024296256
UniProt:
A0A8C8F6U2
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MRPQRQQINNNTAIIGRCLSPTLDVRWSKDFTNGINMDTMKMNPPRQDSRPNAHSGCGRP
CSPVPAFVSEFMGPEHPLLPPAAALPSGLTGDPGPQPHRVRPRRATHSAGAIYSHSTSPL
TLPTGPGDAITLSENSPSGFPIAFRSCDDCALSPERIDLDRRCLEECHLLEGMGRLRLLN
FQHNLITHIHNLSHLRHLAFLDLYDNHISQMSGISALASLRVLMLGKNRIQRTCSLDNLT
KLDILDLHGNQISQIGNLSHLSELRVLNLAGNCISRVDNLQGLDSLTELNLRRNCISTVT
EVDQLPCLQRLFLSCNSITSFDELACLGESCSLYELTLDGNPVALETWYKQAALRCVLQL
RQLDMKRVTEEERRMACVMARKEDEKKRESHKQAMHKSPAHVVPQQFYTQLGLKSQDSSV
TSKEKRRLAIRNAALQWEGVRACLEHPAQNGAKEEVSPEASPAHSPAQTNGLALEPSPDE
QLRRVSPVSAPDRPTGGSETRIRSTSRPNSPRDPKLLEAGGASLQSLSLSDSHLAELDGE
TLRLFGLGALEALERGWGVQTAGAVTVIAFRYIHFDAIVPTLPRIRVKFPNLSHLIFLET
NVSRLPQLAALAQVRRLDQLTIHPEGNPVVSLSLWRSFLIYRLHHFNLHKINNLEVTMND
VISAERLFGTLGHIAATETPRCRLLVLLEESRKRQLQFLLEGRGRRAGLSPEELRDNGKL
LGEGLSRALFNYPSRDCCSVGAESPEEGAMESSSERRAVMEQYIQAQVQRASDTNLKGES
LHKLWPSMFMEMVRDYVLEMRDRPTFRQACLNRLSTQGK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcggccacaaagacaacagatcaacaacaatacagccattataggaaggtgtctttct
cccacgctggacgtccgatggtctaaagactttacaaacgggataaacatggacaccatg
aaaatgaatccaccaagacaagacagcaggcctaatgcacacagtggctgtggcaggccc
tgttcccctgtgccagcatttgtcagtgagtttatgggccctgagcatcccctcctaccc
ccagctgctgctctacccagtgggctgactggggacccggggccacagccacacagagtg
aggcctaggagagcaacccacagtgcaggggccatctactcccacagtacctcacccctc
accctgccaactggaccaggtgatgccataacattgagtgagaattctccctctggtttt
ccaattgcctttcgttcctgtgatgattgtgctttgagtcctgagcgaatagatttggac
aggcgttgtctggaggagtgtcacctgctggagggcatgggtaggctgcggctgcttaac
tttcagcacaacctcatcacgcacatccacaatctgtctcatctgcggcacctggccttc
ctagacctgtatgacaaccacatctcccagatgtctggcatctcagccctggcctctctc
agagtgcttatgctgggcaagaacagaatccagaggacatgcagtctggataacctgact
aaactagatattctggacttgcatggcaatcagatctcccagatagggaacctctcccac
ctgtctgagctgcgtgtgttgaacttggcagggaactgcatctccagggtggacaacctg
cagggcctggactcactgaccgagctcaacctgagacgcaactgcatctccactgtgaca
gaggtagaccagctgccctgcctccagcgcctctttctcagctgcaacagcatcaccagt
tttgatgagctagcctgcctgggagagtcgtgctccctttatgagctcaccctggatggg
aacccagtagccctggagacatggtacaagcaggccgccctgcgctgtgtgcttcaactc
agacagctggacatgaaacgtgtcacggaggaggagagacgtatggcctgcgtcatggcc
cggaaggaggatgagaagaagagggagagtcacaagcaggccatgcacaagagtcctgct
catgttgtgcctcagcagttctacactcaacttggactcaagtctcaggactcctcagtg
acaagcaaggagaagcggcgtctggccatccgtaatgcagcactgcagtgggagggggtc
agggcctgcctggagcacccggctcagaacggagccaaggaggaagtcagccctgaagca
agccctgcccacagtcccgcccagaccaatggccttgcactggaaccttctccggatgag
cagctcagacgggtgagtccggtgtcggctccggacaggccaacagggggcagtgagacc
cggatacgctccaccagtcgccccaacagtcctcgagaccccaagctccttgaggcaggg
ggtgccagcctgcagagcctctccctgtcagacagccacctggcagagctggatggggaa
accctgcgcctgttcggcctcggggccctggaggccctggagagaggctggggggtccag
actgcaggggccgtcactgtcatagccttccgctacatccactttgatgcaatcgtgcca
acactgccacgcataagggtcaagttccccaacctatctcacctgattttcctggagacc
aacgtcagccgtcttccccagctggctgctctggcccaggtgagacgtctggaccagctg
accatccacccagaggggaaccctgtagtcagtctttccctgtggagatccttcctcatc
taccgcctgcaccacttcaacctgcacaagatcaacaacctggaggtgaccatgaatgac
gtgatctctgcagagcgtctgtttgggacgctgggtcatatcgctgccaccgagacacca
cgctgccgcctgctagtactactggaggagtccaggaagcgtcagctgcagtttctgttg
gaggggcgtgggcgccgcgcaggcttgagcccagaggagctgcgtgacaacggcaagctg
ctaggagagggcctgagcagagccctgttcaactaccccagtagagactgctgcagtgtg
ggagcggagagcccagaggagggtgctatggagtcgtcatcggagcgccgcgctgtgatg
gaacagtatatacaggctcaggtccagagggcatctgacaccaacctgaagggggagtcc
ctccacaaactgtggccctccatgttcatggagatggtgagagactatgtgctggagatg
agggaccgaccaaccttccgtcaggcctgcctcaacaggctctccacacagggaaagtga
DBGET
integrated database retrieval system
