Oncorhynchus tshawytscha (Chinook salmon): 112263878
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Entry
112263878 CDS
T05605
Name
(RefSeq) Bardet-Biedl syndrome 4 protein-like isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112263878
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112263878
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
112263878
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
BBSome
112263878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
TPR_14
TPR_17
TPR_12
ANAPC3
TPR_16
TPR_9
TPR_7
TPR_15
NatA_aux_su
TPR_10
PknG_TPR
TPR_20
Wzy_C_2
HrpB1_HrpK
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
112263878
NCBI-ProteinID:
XP_042172383
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MATASCAVKMADEENTLTLPVASETKKRQAPKAPELPILERRNWLIHLHYIRKDYEICKA
MIKEQLQETQGMCEYAIYVQALILRLEGQIQPSLELFQSCAILNPTSPDNLKQVARSLFL
LGKHKAAIEVYQEAGKLNEKDWEINHNLGVCYSFIKDFQNSEEQLNAALQLKKHDRTFMT
LGKVHLLAGDTDKAIEVYKSAVEFSPENAELLTTLGLLYLQLGKYQKAFEHLGNALTHDP
NNYKAILAAGSMMQTHGDFDVAMNKYRVAACMVPESPPLWNNIGMCFFGKKKYVAAISCL
KRAHYLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAATNLQPHLGELYMLLAVALTNLED
VDNARRSYEQAVALDQSNPLVNLNFAILLYNHGDKKGALQQYQEMERKVNILKDSNTEFD
PELMDMAQKMAAALQVGESLEWTKPVKDPKSKQRSAGAPSKTPGSSQQPLGTNQALEQAM
SSAAGYNKSISLPTGVSPHSQPTPPPWP
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcctcctgtgctgtcaagatggcggacgaagaaaacacactaactctccca
gtggcctctgagacgaagaaacgccaggctccaaaggctccggaacttcccattctggag
aggaggaactggctcatccacctgcactacatccgcaaagactatgagatctgcaaggca
atgatcaaagagcagctacaggagacccagggaatgtgtgaatatgccatatacgtacaa
gctttaatcttgcgtctggaggggcagatccagccatccctggagctgttccagagttgt
gccatcctcaatcccaccagccccgacaacctcaaacaagtggcccgatcgctttttctg
ttggggaaacacaaggcagccattgaggtttatcaggaagctgggaagctcaatgagaaa
gactgggagatcaaccataatctgggtgtatgctattccttcataaaagacttccaaaat
tctgaagagcagttgaatgcagccctgcagttgaaaaaacacgacaggacattcatgaca
ctgggaaaggtccacttgttggcgggagacacggacaaagccatcgaagtgtacaagagt
gcagtggagttctctccagagaatgccgagttgctgaccactctggggctcctgtatctg
cagttgggaaaataccaaaaagcatttgaacatctcgggaatgcacttactcatgatcct
aataactataaggccatcctggcagcaggcagtatgatgcagacccatggggactttgat
gtggccatgaacaagtaccgcgtggcagcgtgcatggtccccgagagccccccgctctgg
aacaacatcggcatgtgcttctttggcaagaagaaatatgtagcagccatcagctgcctg
aagcgggcccactacctgtctccgtttgactggaaggtactgtacaacctgggcctggtg
cacctcaccatgcagcagtatgcctctgccttccacttcctcagcgctgccaccaacctg
cagccccacctgggagaactctacatgctactagcagttgcactgaccaatctggaggat
gtggacaatgccaggagatcctatgaacaagctgtggctttagaccagtccaaccctctg
gtcaacctgaactttgccattctgctgtacaaccacggggacaagaagggagccctgcaa
cagtaccaagagatggaaaggaaagtcaacatactgaaggacagcaacactgagtttgac
cctgagctaatggacatggctcagaagatggccgctgccttgcaggtgggagagagcctg
gagtggaccaagccggtcaaagaccccaagtctaagcagcgctcggctggggcccccagt
aaaacccctggcagctcccagcagcccctaggcaccaaccaggccctggagcaggccatg
tcctccgccgcaggctacaacaagagcatctcactccccacaggagtgtccccccacagc
cagcccacgccccctccctggccttag
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