Oncorhynchus tshawytscha (Chinook salmon): 112263890
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Entry
112263890 CDS
T05605
Symbol
wdfy3
Name
(RefSeq) WD repeat and FYVE domain-containing protein 3
KO
K22262
WD repeat and FYVE domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112263890 (wdfy3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112263890 (wdfy3)
Membrane trafficking [BR:
otw04131
]
Autophagy
Aggrephagy
Scaffold proteins
112263890 (wdfy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
FYVE
WD40
PH_BEACH
NBCH_WD40
DUF4704
Laminin_G_3
DUF4800
Motif
Other DBs
NCBI-GeneID:
112263890
NCBI-ProteinID:
XP_042187083
LinkDB
All DBs
Position
LG12:5764233..5900303
Genome browser
AA seq
2674 aa
AA seq
DB search
MTDVRKWGLLVWGVPVWGVPVWGRTGVGRTGVGAYRCGAYRCGAYRCDAYRCGAYRCDAY
RCGAYRCGVYRCGAYRCGAYRCGAYRCGVYRCGVYRCGAYRCGAYRCGAYRCGVYRCGAY
RCGAYRCGVYRCGAYRCGVYRCGAYRCGVYRCGVYRCGAYRCGAYRCGAYRCGGLPVWGL
PVWGLLVWGLLVWGLLVWSLPVWGVPASLSLSPSLRVGERLFPPPSGLSYSTWFCVERFS
SAPHTHPVRLLTVVRRATSSEQHYICLAVVLSAKDRSLTVSTKEELLQSYVDDFSEESSF
FEVLPCCARFRCGELIGEGQWHHLLLVMSKGMLKNSMATLYIDGQLFQTTKLHYIHSSPG
GSGSTNPPVVSTVYSYIGTPPAQRQLSNLVWRLGPTHFLEEGLPAASVAAVYELGPNYTG
SFQAVYLLCKDSKTGEPSCPVALVPEEKVSFSLYALSVSALTVAKIRKVYNKLDSKAIAK
QLAVSSHENATPVKLIHNAAGHLNGPARTIGAAVIGYLGVRAFVPKPVATNLQYVGGAAA
ILGLVAMAQDVEGLYAAVKAMVCVVKSNPLASKEMERIKGYQLLAMLLKKKRHLLNSHIL
HLTFSLVGTVDSGHETSIIPNTTAFQDLLCDFEVWLHAPYELHLSLFEHFIELLTESSEA
AKNAKLLREFQLIPKLLLTLRDTSLSQPTISAISNVLSLLLQGFPNPYDLLRFGQFISST
LPTFAVCEKFVVMEVNNEEKIDGGNDEDLGGLLSANLILLRNRLLDILLKLLFTTKEKCA
VNAQACEELVRTLGFDWLLMFTEEHLHSSSVTAALWILVVLLSNQPILTRFKEGLTGGEW
LDHTDSVLTNKIGTVMGFNVGRSAGGRSTLREINRDACHFPGFPVLQTLLPKHTNVPELY
FLLMALFLQQPVTELPDSLQVHFDLDSIWTFIFGVPASSATIVGSIHSVCTEAGFLLLGM
LRSMLNLPWQSEEEGSWLREYPVTLMQFFRYLYHNVPDLAPMWHSPEFLCVLAASVFPFN
IRPYSEMVSDLDDEAGSPTEEFKAFTADTGMNRSQSEYCNVGSKTYLTNHPAKKYVFDFM
KVLIMDNLCLTPANKQTSTIDLLLEASPERSTRTQQKEFQSHILDSVMEHLLAADVLLGE
DASLPITIGGSYQVLVNNVLYFTQRVVDKLWQGMFNKESKMVVEFIVQLIGQSKRRSQSL
SLDSLYHCLNRTVLYQLSRPHKTVPQQVALLDSLRVLTVNRNLVLGPGNHDQEFVACLAH
CFINLHVGSSVEGFGLEAEARMTTWHVMMPAENGPDNRHSQEVSEGRQLLLKAVNRVWTE
LMHSKRPMLEDIFKVSLPTNDRGHVDISTARPALEEPALKSWQNHLVHEKKCISRGESVA
PASQSKLSRVSSGFGLSKLTGARRNKKENSLNKNNLSAQETFQWMFTHIAVVRDLVAMQY
KEYQERQQNVLKYVTEEWSSIEYELLRERGLWGPPIGSHLDKFLLEMTEGPCRMRKKMVR
NDMFYIHYPYVPEPEPSTNGQVQKPVRYRRAISYDSKEYYMRLLSGNPGMYQHSIEQDTE
GETTQHEPGEVHGEDTIARVKGLVKAPLKRSRSTTDRADEEQDLLQEQILESGGLDEEQR
TDNTSLLRLLEEGEKIQHMYRCARVQGLDTSEGLLLFGKEHFYVIDGFTMTVSREIRDIE
TLPANLHETIIPRGARQGQSQLKRTCSIFAYEDIKEVHKRRYLLQPMAVEVFSGDGRNYL
LAFQKGVRNKVYQRFLAVVPSLADSSESVSGQRPNTSVEQGSGLLSTLVGEKSVTQRWER
GEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILADYDSEELDLNNPRTFRNLAKPMGAQT
DDRLTQYKKRFKDWEDPTSETPAYHYGTHYSSAMIVASYLIRMEPFTQIFLRLQGGHFDL
ADRMFHSVREAWLSASKHNMADVKELIPEFFYLPEFMLNSNNFDLGAKQNGIRLGDVLLP
PWAKGDPREFIRVHRQALECDYVSSHLHEWIDLIFGFKQQGPPAVEAVNVFHHLFYEGQV
DIYNINDPLKETATIGFINNFGQIPKQLFKKPHPPKRVRSKSNGEMAGGVPVSLSSTTDK
IFFHHLDNLRPSLAPVKERREPVGQIVCTEKGILAVEQNKVLQPPVWNKTFAWGYADLSC
RLANYESDKAVVVYECLSEWGQILCAICPNPKLVITGGTSTAICVWETGTSKERAKTLTL
KQALLGHTDTVTCLTASSAYHILVSGSRDRTCIIWDLNKLSFVTQLRGHRAPVSALCINE
LTGDIVSSAGTYIHVWSINGSPIASANTFTGRSQQILCCCVSEMNEWDTQNVIVTGHSDG
VVRFWRMEFLQVPETPAPEPIEPPDVTDCCTEDKLAEGPESQNADDDSSESDGDEPCLST
ESKPSPLPNAAAGGGAGSVGGGSGSQPGSTVHRPKVPRGPGAPGGRPGASWSVDSGSDDS
RRWSDTLSLDEKDGFVFVNYSEGQTGQTPLKPGVHPHPQLHPPHPIAGHGGVPQPVHPTT
MEARPYNQLRAGYRWERQLVFRSKLTMHTAFNRKDNAHPAEITSLAISKDHSKILVGDGR
GRVFSWSVSDQPGRSAADHWVKDEVVDSCSGCTVRFSLTERRHHCRNCGQLFCQKCSRFQ
SEIKRLKISSPVRVCQNCYYNLQHERSAEDGCRN
NT seq
8025 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgtgagaaagtggggtctactggtgtggggcgtaccggtgtggggcgtaccg
gtgtgggggcgtaccggtgtggggcgtaccggtgtgggggcgtaccggtgtggggcctac
cggtgtggggcctaccggtgtgatgcctaccgctgtggggcctaccggtgtgatgcctac
cggtgtggggcctaccggtgtggggtctaccggtgtggggcctaccggtgtggggcctac
cggtgtggggcctaccggtgtggggtctaccggtgtggggtctaccggtgtggggcctac
cggtgtggggcctaccggtgtggggcctaccggtgtggggtctaccggtgtggggcctac
cggtgtggggcctaccggtgtggggtctaccggtgtggggcctaccggtgtggggtctac
cggtgtggggcctaccggtgtggggtctaccggtgtggggtctaccggtgtggggcctac
cggtgtggggcctaccggtgtggggcctaccgatgtgggggcctaccggtgtggggccta
ccggtgtggggcctactggtgtggggcctactggtgtggggcctactggtgtggagtcta
ccggtgtggggcgtgccagcttctctctccctctctccctccctccgtgtaggagagcgt
ctgttcccccctccgtctggtctaagctactctacgtggttctgtgtggagaggttcagc
tctgccccccacacccaccctgtccgtctgctgacggtggtccgacgggccacatcctca
gaacaacactatatctgtctggccgtggttctgtctgctaaggaccggtccctgacggtg
tccaccaaggaggagctgctgcagagctacgtggatgatttcagcgaggagtcttcgttc
ttcgaggttctgccgtgctgcgccaggttccgctgcggagagctgatcggagagggtcag
tggcaccacctgctgttagtcatgagtaaaggcatgttgaaaaacagcatggccacgctg
tacatcgacggacaactgttccaaaccaccaagctccactacatccacagttctcctggt
ggttctgggagcaccaaccctcctgtggtcagcaccgtgtacagctacataggcacgccc
cctgcccagagacagctgtccaatctggtgtggcgcctggggcccacacacttcctggag
gaggggcttcctgctgccagcgtcgcggcggtgtacgagctcggacccaactacacaggc
agctttcaggccgtctacctgctctgtaaagactctaagactggagagccttcatgtcca
gtcgccctggtcccagaggagaaggtatccttcagcctgtacgccctctctgtctctgcc
ctcaccgtggccaagatacgcaaggtctacaacaagctggacagcaaggccatcgctaaa
cagttggctgtgtcgtctcatgagaatgccactccggtcaagctgatccacaacgcggcc
ggtcacctcaacggtccagcacgcaccataggagcagctgtcattggatacctgggtgtg
cgtgcgttcgtccccaagcctgtggcgaccaacctgcagtacgtgggcggggcggcggcc
attttgggcctggttgccatggcgcaggacgttgagggtctctacgcggccgtcaaggcg
atggtgtgcgtcgtcaagagcaacccgctggccagcaaggagatggagcgcatcaaaggc
taccagctgctggccatgttgttgaagaaaaagcgtcacctgctgaacagccacatcctg
cacctgaccttttccctggtgggaacagtagacagcggccacgagacctccatcataccc
aacaccaccgccttccaggacctgctctgtgacttcgaggtgtggctccatgcaccctac
gaactgcacctgtccctgttcgaacactttatagagctcctcactgagtccagtgaggca
gcgaagaacgctaagttgttacgagagttccagctgattcccaagctgctgttaaccctg
agagacacgtctctgtctcagcccaccatctctgctatcagcaacgttttgagtctgcta
ctgcaagggttccccaacccatatgacctgctacggtttggccagttcatctcatccacc
ctgccaacctttgctgtgtgtgagaagtttgtagtgatggaggtcaacaacgaggagaag
atagatggaggtaatgatgaagaccttgggggtcttctgtcggccaacctgatcctgttg
aggaacagactgctagacatccttctcaaactgctcttcaccaccaaggagaaatgcgcc
gtcaacgcacaggcatgtgaggagttggtgcgtaccctgggcttcgactggttgttgatg
ttcacggaggagcacctccactccagcagtgtaacagcagctctgtggatcctggtggtt
ctcctcagtaaccagcccatactgaccaggttcaaagagggactgaccggaggcgaatgg
ctggaccacactgactctgtcctcaccaacaagattggcaccgtgatgggcttcaacgtg
ggccgcagcgccggcggtcgctccacgctacgggagatcaaccgagacgcctgccatttc
ccagggtttcctgttctgcagacgctgctgccgaaacacaccaacgtccccgagctctac
ttcctgctgatggccctgttcctgcaacaacccgtcacagagctgccggacagcctccag
gtacattttgacctggactctatctggacctttatctttggggtccctgcttccagcgcc
accatagtgggatccatccacagtgtctgcaccgaggctggcttcctgttactggggatg
ctgaggagcatgctcaacctgccgtggcagtctgaggaagagggttcgtggctgagggag
tacccggtgactctgatgcagttcttcaggtacctgtatcacaacgtcccagacctggcc
ccaatgtggcacagcccagagttcctgtgtgtcctggctgcctcagtcttccccttcaac
atcaggccctactctgagatggtgagtgacctggatgacgaagcagggtcaccaacggaa
gaattcaaggccttcaccgccgacacgggcatgaaccgtagccaatcggaatactgcaac
gtgggttcgaagacctacctgaccaatcatccggccaagaagtatgtgtttgacttcatg
aaggtgctgatcatggacaacctgtgtctgactccggccaacaagcagacgtccaccata
gacctactgttagaggcgtccccagagcgctccaccaggactcagcagaaagagttccag
tcccacatcctggactctgtcatggaacacctgctggctgctgatgtcctcctaggtgag
gatgcatccttgcccatcaccattggagggagctaccaggtgctggtgaacaacgtgctc
tacttcacacagcgcgtggtggacaagctgtggcagggcatgttcaacaaggagtccaag
atggtggtggagtttatagtgcagcttataggacagtccaagaggaggtcgcagagtctg
tctctggactctctctaccactgtctgaaccgtacggtcctgtaccagctgtctcgacct
cacaagaccgtacctcagcaggtagctctgctggactctctacgggtgttgactgtcaac
cgtaacctggtactgggaccgggcaaccacgaccaggagtttgtagcctgtctggctcac
tgcttcatcaacctgcacgttgggagtagtgtggagggttttggtttggaggcagaggct
cgtatgaccacctggcacgtcatgatgcccgctgagaatggacctgataacagacacagc
caggaagttagcgaaggtcgccagctgctgctgaaggcagtaaaccgtgtgtggacagag
ctgatgcacagcaaaagacccatgttggaggacatctttaaggtgtccctccccaccaac
gacagaggacatgtagatatcagcaccgctcggcctgccctggaggaacctgccctgaag
agctggcagaaccacctggtccatgagaagaagtgtattagcagaggggagtcggtggct
ccggccagccagtccaagctgtctcgggtcagtagtggttttggtctgtccaagttgacc
ggcgctcgacgcaacaagaaggaaaactccctgaacaagaacaacctttctgcacaggag
acgttccagtggatgttcacccacatagcggtggtcagggacctggtggccatgcagtat
aaagagtaccaggagaggcagcagaatgtcctaaaatacgtgacagaggagtggtcgtct
atagagtatgagctgctgagagagcggggcctctgggggccccccatcggatcccacctg
gacaagttcctactcgagatgaccgaggggccctgtcgcatgaggaagaagatggtccgc
aatgatatgttctacatacattacccatacgtccccgagcctgaacccagcactaatggc
caagtacagaagccggtgcgttaccgccgagcgataagctacgacagtaaggagtactac
atgagactgctgtcagggaaccctgggatgtatcagcactctatagagcaggacactgag
ggagagaccactcagcatgaacctggagaggtgcacggagaggacaccatcgccagagtc
aaaggtctggtgaaggcccctctgaagaggtcacgctccaccacggacagagccgatgag
gaacaagacctgctccaggaacagatcttagagtcaggaggtctggacgaggaacagagg
acagacaacacatcactgctacgactactggaggagggagagaagatccaacacatgtac
cggtgtgcgcgggtgcagggtctggacactagcgaggggctgctcctgttcgggaaggag
cacttctatgtcatcgacggtttcaccatgaccgtcagcagagagatcagagacatcgag
acgctgcccgccaatcttcatgagaccatcatccccagaggtgcgaggcagggtcagagc
cagctgaagaggacctgtagcatcttcgcttacgaggacattaaggaggtccacaagaga
cgatacctgctgcagcccatggctgtggaggtgttctcaggagatgggaggaactatctg
ctggccttccagaaaggagtccgtaacaaggtgtaccagaggttcctcgctgtggttccc
tctctggctgacagctcagagtccgtctcaggacaaaggcccaataccagcgtagagcag
gggtctgggctactcagcactctggtaggagagaaatctgtcacccaaagatgggagcgt
ggggagatcagtaacttccagtatctgatgcatctcaacaccctggctggtcgctcctac
aacgacctgatgcagtaccctgtcttcccctggatcctggctgactacgactctgaggag
ttggacctaaacaacccacggacgttccgtaacctggctaaaccaatgggagcccagaca
gacgacaggctgacccagtacaagaagaggttcaaggactgggaggaccctaccagtgag
accccagcgtatcactacggtacacactactcctcagccatgatcgtggcgtcctacctg
atccgcatggaacctttcactcagatctttctcaggcttcagggaggtcactttgacctg
gctgacaggatgttccacagcgtgcgtgaggcctggctctctgcctccaaacacaacatg
gctgacgtcaaggagctcatcccggagttcttctacctgccagagttcatgctcaactct
aacaactttgacctgggtgccaaacagaatgggattcgactaggagacgtccttctgcct
ccatgggccaagggagacccccgagagttcatcagagtccatcgacaggctctggagtgt
gactacgtatcgtcccacctccatgagtggatcgacctgatctttggcttcaagcagcag
ggtcctcctgcggtggaggcagtcaatgtgttccaccacctgttctacgagggccaggtg
gacatctacaacatcaacgaccccctcaaggagaccgccaccatcgggttcatcaacaac
ttcggacaaatccccaagcagttgtttaagaagccccaccctccgaagcgtgtacgtagt
aagtctaacggggagatggcagggggcgtgcctgtctctctctcctcaaccactgacaag
atcttcttccatcatctggacaacctcagaccctcgctagcccccgtcaaagaaaggaga
gagccagtgggccagatcgtgtgtactgagaagggcattctggctgtggagcagaataaa
gtcctccaacctcctgtctggaacaagacctttgcctggggttacgctgatctctcctgc
agactggccaactatgagtccgacaaggcggtggtggtgtatgagtgtctgtcagagtgg
ggtcagatcctgtgtgccatctgccccaaccccaagctggtcatcaccgggggaaccagc
actgccatctgtgtctgggagacgggcacatccaaggagagggccaagaccctcacactc
aaacaggcgttgctgggccatacagacacagtaacctgtctgacagcctcgtcagcgtat
cacatcctggtgtctggttctagagacaggacctgcatcatctgggacctcaacaaactc
tccttcgtcacacagctcagaggacacagggcccccgtctccgccctttgcatcaacgaa
ctcacgggagacatagtgtcttcagcgggcacctacatccatgtgtggagcatcaacggc
agtcccatagccagcgccaacaccttcacaggccgctcacagcagatcctctgttgctgc
gtgtcagagatgaacgaatgggacacgcagaacgtcatcgtcaccggacactccgacggc
gtcgtcaggttctggaggatggagttcctacaagtcccagaaacccctgctccagagccc
atcgagccccctgatgtaactgactgctgtacagaggacaagctggcagagggacccgag
agccagaacgctgacgacgacagcagcgaatcagacggagacgagccctgcctcagcaca
gagtccaaaccctcccctctgcccaacgctgcagctgggggaggagctggatcggttggg
ggaggatcaggcagccaaccaggcagcaccgtccacagacccaaagttcctaggggtccc
ggtgcccccgggggtcggccaggggcctcctggtcagtggacagcgggtcagatgactcc
cgacgttggtcagacaccctcagcctggacgagaaggacggctttgtgttcgtcaactac
tccgagggacagacgggacagacacccctcaaaccaggggtccaccctcacccccagctt
caccctccgcaccccatagctggccatgggggggtcccccagcccgtacaccccaccacc
atggaggcacggccctataaccagctcagagcaggctacagatgggagcgacagctggtg
ttccgtagtaaactgaccatgcacactgcattcaaccggaaggacaacgctcacccagcc
gagatcacatccctcgccatctccaaggaccacagtaagatcctggtgggtgatggtcgt
ggcagagtgttcagctggtcggtgagtgaccagcctggtcgttctgctgcagaccactgg
gtgaaggacgaggttgtggacagctgttctggctgtaccgtacgtttctccctcacagag
agacgtcaccactgcaggaactgtggacagctcttctgtcagaagtgtagtcgtttccag
tctgagatcaagcgtctgaagatctcatccccggtgagggtctgtcagaactgttactat
aacctgcagcacgagcgcagcgctgaggacggatgcagaaactaa
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integrated database retrieval system
