Oncorhynchus tshawytscha (Chinook salmon): 112263895
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Entry
112263895 CDS
T05605
Name
(RefSeq) iporin
KO
K23291
iporin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112263895
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112263895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
SH3_9
SH3_2
SH3_1
SH3_10
Motif
Other DBs
NCBI-GeneID:
112263895
NCBI-ProteinID:
XP_042164266
LinkDB
All DBs
Position
LG28:complement(135605..198797)
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AA seq
1876 aa
AA seq
DB search
MDNPPKLSGETLIVHHIPLVHCQVTGGRQGCGGGGGSLKRSNPFSYPETLGLSRTTSLPE
QDVLQREALVYSSLIQTSTGGGGEGEGGGGGGGRGGSTGSDDSSVTSSNCEDQVMVMVAH
TMPRVKPREQVNNPLRLRHNPFLLNTEEDDDDEEEEEEEDDGDNLNGYLEDSSFHLHGDT
NSALDEEGDGIAPFHLHDLRSTTHKPFLLHSTLGKHSWGCSGRLDSLRGVSSDLSTHLEG
LDLLGLDSPRRHGSSGSTLSMDCGEQEWGEDEEEEEDHPMRGGGRGNSQADSSSGSGAAH
QRCSCCGLSQTYLEHFPEPFSESSERQLGYASDSSCNSSDGVLVNFSAIYNNMNNSIPAT
STKPPPLATTTTNLNSSTDQSCTSSVCICSVLDEEAGSRRGSGGGGAFYLDLHTSPTEPP
HLHSQQPPCPSSNTLPLLIEPHSHPHPTTSSCTCSAEHQGALDLDSNCNSYHPPHSDSGS
DLMSCLRSQARLVVTTQNYYKLVTCDLSSPSPPSPAGSSASVASCSDEHSKDSPAPDTPT
TTQPTEYYLFRRPPGGEEEEEEEEEGGESSQRDEDEEENDEDEQDGKERKKQQQQMGGAC
SDPIIEGQVYVNISPPVVGRGPIGGGPSRPRSRSYDRNLDISPPPRLGSLERMLSCPVRL
SEGTAPLGPSPLPRVTSFAEIAKRKRKNGGSTGSPSLRMGGCSDPFSSTHSAHSHSSADF
SPILEGLGQGPSHSFPFQRCYSQGSVDRHSPGGGVRETRSKAEGGLSSSSSSSAVVRYTK
DQRPTTLPIQPFTFHHQFSKPPQPLLPLLTGYVSGMQARGGGPSGGPEGGEGANDPGEDS
MRWCQGSGGDGMVSAVASLGPGSVRPSPLGSYSPVRLQGLTSSSGTCSTCTPSPQPTRSL
SCPLSTGLLPLHHTPSPAAAVPLPPTPPPPTLGVKRGAVPPMLPPVQGQVQGHHHHRGTL
PTLPAVPQDSETSLGYEETTLDSQEGSRGPGPRTQHASSAFSHVHSPYLSLSLNFNAPLP
LPSPMYTSSTSHFSFNLAFPNPPHENLPSSLISLFLPLPLYFLLLLSHPTLFSSLRASLQ
TPRIFSPCPPSPYPLLHPSSLTGHHLSPQTLKWREYRRKNPLGVERCSLGGSAGSGDPPL
SGSLDGNGRRGGAVGQRITRRNVFDFPPASSGHTSLGRLNGQSVKQLQQYYSDFLPDYFS
LTERPPEEFCLSPDASSSSSSSSSSQSHIAVDLQQKRGLVKAINTAVDLIVAHFGTSRDP
DVKAKLGNSWVSPNVGHLILKYLCPALREVLGDGLKAYVLDLIIGQRRNQPWSLVEASTQ
LGPSTRVLHSLFSKVSQYSEFTSHSMRLNAFIFGLLNLRSLEFWFNHLYTHEDIVATHYH
PWGFLPLSQRPCQPLFEEFLLLLQPLSLLPFDLDLLFEPRLVQKGQEHRRRKEQLCSAST
GEDLDQSARSTFQLMRGWSTESRRAESMRDKREGSGAGKRERLGLRREGTWPRIEGVGER
GSRELMMQRTGSRREGAGMDCSGAGLLEAQPMTTEVGTGFANLWRESGRGRGIESEGGKE
ERRKERERDWAEEGHQRQERDRQACWWYQLMQSSQVYIDQSAQGGSKFVKTEKRKKSAER
RSQLPPPREGVVEGAESSQDEEGLRERGRSRKSSSSSSGEWTGSRGRGRLSWMGSPPESL
LTQDKENETELGAPVTGAPEASVAQPAAQAEFPSQGQGMRWGRLFGSSIGGGGTPSRPEQ
RSAKSQSRLPSGWLTGLDMSVLDLVAQTVGVGTGKRVEPSAPMAPPTLNQPSPPLQTAQE
SHTKQPCEVRALCHHIATEPNQLSFQKGDVLRVLSRADSDWLLCSLGAQRGLVPFIYVTL
RGMEDSQVPQWPQGPH
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggacaacccccccaagctgtctggcgagaccctgatcgttcaccacatccccctggta
cactgtcaggtgactggtgggcggcagggctgtggtggaggagggggttccctgaagaga
tcaaaccctttcagctacccagaaaccctgggcttgagccgcaccacctcccttcctgag
caggatgtactccagagggaagctctggtgtacagcagcctcatccagacctccacagga
ggaggaggagagggagagggaggaggaggaggaggagggagaggaggcagcacggggagc
gatgattcgtcggtgacatccagtaactgcgaggaccaggtgatggtgatggtggcccac
actatgcccagggtgaagccaagagaacaggtcaacaacccactccggctccgtcacaac
ccttttctgctcaacacggaggaggatgatgatgatgaggaggaggaagaggaggaagat
gatggtgataacctgaacggttacttggaagactcctcctttcatctccatggcgataca
aactccgccctggacgaggagggagacgggattgcaccctttcacctccacgacctgcgg
tccaccacacacaagcccttcctgttgcacagcaccctgggtaagcactcttggggctgc
tcagggaggctggactcccttaggggcgtgtcctctgatctctccacccacctggagggc
ctggacctgctgggattggacagtccacgtcgccacggcagcagtggctccaccctctcc
atggactgcggagagcaggagtggggtgaggatgaggaggaggaagaggatcacccaatg
aggggtgggggacggggcaatagccaagctgactcctcctctggctctggcgccgcccac
cagcgctgctcctgctgcggcctctcccagacgtatcttgaacatttccctgaaccgttt
tcagagtcgtcggaacgccagctgggctacgccagcgactcttcctgtaacagctcagat
ggcgtcctggttaacttcagcgccatctataataacatgaacaacagcatcccggcaacc
tctaccaagccgccacctctggccaccacgaccaccaacctcaacagctccaccgaccaa
tcttgcacttcctctgtctgcatctgctcagtgctggatgaggaggcagggagtcgaaga
ggctccggaggtgggggggctttctacctagacctccacacctcccccaccgaacccccc
cacctccactctcaacaacccccctgcccctccagcaacaccctgccgttactcatcgaa
ccccactctcaccctcaccccaccacctcctcctgcacctgttcagctgaacaccagggg
gctctagacctggactccaactgtaactcctatcaccccccccactccgactcaggaagt
gacctcatgtcctgtctgcggagccaggcgcgtctggtggtaaccacccagaactactat
aagctggtgacctgtgacctttcttctccgtcgcccccgagccctgcgggaagctccgca
tcggttgccagctgctctgacgagcacagcaaggatagccctgcccctgacacgcccacc
accacccagccaaccgaatattacctgttcaggcggccaccgggaggagaggaggaggag
gaggaagaggaggagggaggagagtcatcacagcgtgatgaagatgaggaagaaaatgat
gaagacgagcaggacgggaaggagaggaagaagcagcagcagcaaatgggtggagcctgt
tcagacccaatcattgagggccaggtgtacgtcaacatctcccctcctgtggttggccga
ggacccatcggaggagggcccagccgcccccgttcccgtagctacgaccggaacctggac
atatccccgccccctcggctcggctcattggagcgcatgctgagctgccctgtccgtctc
agtgagggcaccgcccccctgggcccgtcccctctgccgcgggtcacttcctttgcagag
attgccaagagaaagaggaaaaatggaggaagcactggctctccttctctcaggatgggg
ggatgttcagatcccttctcctccacccattcggcccactcccactcctcggccgacttc
tcccccatcctggagggcctgggtcagggcccgagccacagtttccccttccagcgctgc
tacagccagggcagtgtggaccgccactcacctggtggtggcgtcagagagacacgctcc
aaggccgaaggtggtctctccagctcttcatccagctcagcagtggtgcgttacactaaa
gaccagcgtcccaccaccctccccattcaacccttcaccttccaccaccagttctccaag
ccgccccagcccctgcttcccttgctgacaggctacgtctctgggatgcaggcccggggt
ggagggccttctggaggtccggaggggggtgaaggcgccaacgacccaggggaagactcg
atgcgttggtgccagggtagtggtggtgatgggatggtgtcagcagtggctagcctcggt
cctggctcggtccggccctcgccactgggtagctattccccggtccgcctccagggattg
acatccagctcagggacctgttctacctgtacccccagcccccagccaacccgtagcctc
tcctgccccctctccaccgggctcctgccccttcaccataccccttcaccagcggcagct
gtccctctgccacccacacctccgcccccaacattgggggtgaagcggggtgcggtgccc
cccatgttgcctcctgtgcagggccaggtgcagggtcaccaccaccaccgtgggaccctg
cccactttaccggccgttccccaggacagtgagacttcgctgggatacgaggagacgaca
ttagactcccaggaggggagcagaggaccagggcctaggacacaacatgcttcctctgcc
ttctcccatgtacactcaccctatctctctctctctctcaatttcaacgctcctcttcct
ctgccttctcccatgtacacttcatctacctctcacttctcgtttaatcttgctttcccc
aatcctccacatgaaaacctaccttcctctctcatctccctctttctaccattacctcta
tattttctccttctcttatcccacccaactctcttctcgtctctccgtgcatccctccaa
acccctcgtattttttctccgtgtcctccatccccgtatcccctcctccatccatcctcc
cttacagggcaccacctctctccacagactctgaaatggagggagtatcgtcgaaagaac
ccattaggggtggagaggtgttccttggggggctctgcagggtcaggcgatccgcctcta
tcaggcagtctggacgggaacggtcgtaggggcggggccgttggtcagcgaatcacacga
cggaacgtgttcgacttccctccggcctctagtggtcacacctccctgggacgactcaat
ggccagtctgtgaagcagctgcagcagtactacagtgacttcctgccagactacttttcc
ctgaccgagcgtcctccagaagagttctgtctctctccggatgcctcctcttcctcgtca
tcctcctcttcctcacagtcccacatcgctgtggacctgcagcagaagagaggtttagtc
aaagccattaatacagcagtagatttaatcgtagctcattttggcaccagtcgggaccct
gatgttaaggcgaagctgggtaacagttgggtgagtcccaacgtgggtcacctgatcctg
aagtacctgtgtccagctctaagggaggtgctgggggatgggctgaaggcctacgtcctg
gacctgatcataggacaaagacgcaaccagccctggagcctggtagaggcctccacacaa
ctaggaccatccacccgtgttctccacagcctgttctccaaagtgtcccagtactcagag
ttcaccagccacagtatgagactcaacgcattcatcttcggactgctcaacttgcgatct
ttggagttttggttcaatcacctctacactcatgaagacatcgtagcgacccactaccac
ccatggggtttcctgccgttatcccagaggccctgccagcctctattcgaggagttcctt
ctcctcctgcagcctctatccctgttgccctttgaccttgacctgctctttgagccccga
ttggtccagaagggccaggaacaccgtagacgcaaggagcagctctgctccgcctccacc
ggtgaggacctggaccaatcagcacgctccaccttccagctcatgagggggtggagcaca
gagtcacggagggcggagtctatgagagataaaagggaagggagtggggcggggaagaga
gagaggctgggtctgagacgagagggaacatggcctaggatagaaggggttggagagaga
ggaagtagagagttgatgatgcagaggacagggtctaggagagaaggggcggggatggat
tgttcaggagcaggacttttagaagcacagccaatgacgacggaagtagggacagggttt
gccaatctgtggagggagagtgggagggggaggggcatagaaagtgagggagggaaggag
gagaggaggaaggagagagagagggattgggcggaggagggtcatcagcgtcaggagcgt
gatcgccaggcgtgctggtggtaccagctcatgcagagttcccaggtctacatcgaccaa
tcagctcaggggggctcaaagtttgtcaagactgagaagaggaagaagtctgcggagagg
cggagccagctcccgccccccagggagggcgtggtggaaggggcggagtctagccaggat
gaggagggtctcagagagagagggagaagcaggaagagcagctccagctccagtggtgag
tggacggggtccaggggaagagggagactctcctggatggggagtcccccagagtcgctg
ctcacccaggacaaggagaacgagacggaactgggggccccagtgacaggagcaccagag
gcctcagtggcccagccagcggcccaagctgagtttccctcccagggccagggcatgcgt
tggggtaggctgtttgggtccagcataggaggtggtggcaccccctccaggccagagcag
agatcagccaaaagtcagagcaggctgccgtccggctggctgacaggtctggacatgtcc
gtgctggaccttgtagctcagacggtgggggtggggacaggtaagagggtggagccttca
gctcctatggcccctcccactctgaaccaaccctctccacctcttcagacagcacaggag
agccacaccaaacaaccctgtgaagtacgagccctgtgccaccacatagccacggagcct
aaccagctgagtttccagaaaggggacgtactgagggtcttgagccgagccgactccgac
tggctcctctgctccctgggggcccagcggggcctggtgcctttcatctatgttaccctg
aggggcatggaggacagccaggtgccccaatggcctcagggaccacactga
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