Oncorhynchus tshawytscha (Chinook salmon): 112263905
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Entry
112263905 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase znrf3-like
KO
K16273
E3 ubiquitin-protein ligase ZNRF3 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112263905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112263905
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112263905
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112263905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112263905
NCBI-ProteinID:
XP_042187270
LinkDB
All DBs
Position
LG12:10846114..11062096
Genome browser
AA seq
923 aa
AA seq
DB search
MMILPSRRLECVADSVVLMIIVVTTSIGTVFAKDTAFVEVVLFESSPNGDYTTYTTGLQG
RFSKAGATISAEGEIVQMHPLGLCNNNDEDDQYEYGWVGVVKLEKPELDPSCLTVLGKAK
RAVQRGATAVIFDVSENSDAIDQLNRLAEDPLKRPVVYVKGADAVKLMNIVNKQKVARTR
IQHRPPRQPTEYFDMGIFLAFFVVVSLVCLVLLIKIKLKQRRSQSSMNRMAIQALEKMET
RKFKAKVKGQRESTYGASDSLSSSSTSDCAICLEKYIEGEELRVIPCAHRFHKKCVDPWL
LQHHTCPHCRHNIIEQRKGNPGAVCMDPVYSRQQRVVLPVHYPGRVHRSGQVTAYPTHTS
MDPHGNPITVLTVDQHSDPQGLYPPQSAHSGAFLRDYHPHPTLHLDHSLNPHHCELQHQP
PAYPQYQQPGPRHGAFKRPKFHGRSFSRAACYSQYETMYQHYYLQGLTFPQQGEGTQGAA
GVGGVTGSAGPHKGHHSMAFQGGLLYPTVVHMAASSRMAEAGSGASGPGCYHGHRSVCSG
YLADCPGSDSSSSSGHCHCSSSDSMLDCTEISNQGVYGSCSTFRSSLSSDYDPYVYRSKS
PCRGSQGEPGATSAGASTACPSTAEDSLTPAPSGGHNGDSLQPQPLPGTSGFSVGDQLSS
CSLEHSYSSRSSLEQPRDTSTTSTTSARPPEGATVDMGKGGQTGEETRGEHGLGRAGACS
CCFQVLPPNMECNGQQGYQRQDSDWVGPMASSGRGCQRGAEQNFYHPGEHLLAPSEQVSY
EGLPYCFYKEMKVHRATGGRYNEDYAVNVQYAHHAADSDACCGVLSQRIPIIHQGTDYEL
GLGTETLYQSSLLLASLTLGQGGEGRTGGRVEPGEGGYFTSGQFSGQANPTQEEETRVLF
HPLNYTTHDASGNSKATDKGLGV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgatgattttaccaagcaggaggttagagtgtgtagccgattctgtagtcttgatgatc
atcgtggttaccacttctattggaacggttttcgccaaggatacggcttttgtggaagta
gtgctgtttgagtccagtccaaatggagattatactacatacacgacggggttgcaagga
cgattctcaaaggcaggagccactatcagcgcggagggcgagattgtacaaatgcatcca
ctgggactgtgtaacaacaatgatgaggacgaccaatacgagtatggctgggtgggagtg
gtaaagctggagaagcctgaactggaccccagctgtctcactgtcctgggaaaggcgaag
cgagcagttcagagaggggcgacggctgtcatttttgatgtgtctgaaaactctgatgcc
attgatcagctaaacaggttagcagaggaccctctgaagaggccggtggtttatgtgaag
ggggccgatgctgttaagctgatgaacatagtcaacaagcagaaagtggcccgcaccagg
atccagcacagaccaccgaggcagcctacagagtactttgacatggggatcttcctggcc
ttcttcgtagtggtgtctctggtctgcctcgtgctgctcatcaagatcaaactaaaacag
agaagaagccagagttctatgaataggatggccatccaggccctggagaagatggagacc
aggaagttcaaggccaaggtcaagggtcagcgtgagagcacctacggagcgtctgattca
ctgagcagtagctccacctctgactgtgccatctgtctggagaagtacatagaaggagag
gagctacgggtcatcccctgtgcccacaggttccataagaagtgtgtggatccttggctc
ctccaacaccacacctgtcctcactgtagacacaacatcatcgagcaaaggaaggggaac
cccggcgctgtctgcatggacccagtctacagccggcagcagagggtagtcctgcctgtc
cactaccctggaagggtgcaccgttctgggcaggtgactgcctaccccacccacacctcc
atggacccccatggtaaccccatcacagtgctgacagtggaccagcactcagacccccag
ggcctgtaccctccccagtctgcccactccggggccttcctccgggactaccacccccac
ccaaccctgcacctggaccactctctcaacccccatcactgtgagctgcagcatcaaccc
cctgcctacccccagtaccagcagccaggtccccgccacggcgccttcaagaggcctaag
ttccacggacgcagcttctcgcgggccgcctgctactcgcagtacgagaccatgtaccaa
cactactacctccagggcctgaccttcccccagcagggtgaggggacccagggggcagca
ggtgtaggaggggtgactgggagcgccgggccccacaagggccaccacagcatggctttc
caaggggggctgctctaccccacggtggtccacatggccgccagctccaggatggctgag
gcagggagcggcgcctcggggccgggctgttaccatggccaccgctcggtgtgcagtggt
tacctggccgactgcccgggcagcgacagcagcagcagctctggacactgccactgttcc
tccagtgactccatgctggactgtacagagatcagtaaccagggggtatacggctcctgt
tccactttccgcagctccctgagctctgactacgacccctacgtctaccgcagtaagagc
ccctgtagggggtcgcaaggggagccaggggccacgtctgcaggggcctccaccgcctgc
ccctccacagccgaggactccctaaccccagctccctcggggggacacaatggcgacagc
ctgcagccacagcctcttcctggaacctcagggttcagtgtgggggaccagctctccagc
tgcagtctggagcacagctacagcagccgctcgtcactggaacaacccagggacaccagc
accactagcactacctcagccaggcctccagagggagccacagtggacatggggaaggga
gggcagacaggggaggagacgaggggggagcatggcctgggaagagcaggggcgtgtagc
tgctgtttccaggtgctccctcccaacatggagtgcaatggtcagcagggatatcagagg
caggactcagactgggtggggcctatggcctcctcgggacgtggctgtcagaggggggca
gagcagaacttttaccaccctggggagcacctgttggctccgtcggagcaggtgagctat
gagggcctgccctattgcttctacaaggagatgaaggttcaccgggccacaggggggcgc
tataatgaggactatgccgtgaatgtgcagtatgcgcaccacgctgcagactcggatgcc
tgctgtggtgtgctcagccagagaatacccataatccaccagggcacagactatgagctg
ggcttggggacggagactctgtatcagagcagcctactgctagccagcctcaccttgggg
caggggggcgaggggcggactggtgggcgggtggagcctggtgagggagggtacttcacc
tcaggacagttcagtggtcaagcgaaccccacccaggaagaagagaccagggtcctgttc
caccccctgaactacactacccacgatgcatctggaaacagtaaagctacagacaagggt
ctgggggtatga
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