Oncorhynchus tshawytscha (Chinook salmon): 112264011
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Entry
112264011 CDS
T05605
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112264011
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112264011
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GFIT
Motif
Pfam:
DUF5587
RUBC_PIKBD
Motif
Other DBs
NCBI-GeneID:
112264011
NCBI-ProteinID:
XP_042187070
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Position
LG12:complement(37830546..37837060)
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AA seq
583 aa
AA seq
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MGADFPWDCFSLVVEYSNTEHSPWAAICTERNITHITFQTRIPNSSVSDPESWSLEQSVP
FVLFVTEGLLSCPLLLQILESTCNMTVLERSHSQSLQMLGGTHHYAVITVDESTAVIIQE
QEELCQERACESLVIRLTALSLQYSCCWLILHCQQDSGLTSEGFNNLVLVYSSLVLFGLK
TEDLDVKVLIVSEVVDIAKWICQIAFHTLLSSDRDPLSYLDREWLSVISSKEERCLLGFP
CVNPLVAQLMLSRGPSLHWLLGASLSQLQELLPEVPHKVVKLFSDTTSLYKLTAAASSTE
SHIDFTHQKDHNSPTEPWATSRDNQYTHTDTHTSRDPHADCNRHTHRDPEPFNSICFLAG
SPSAESVAGSFYEESSVMTKEDGADFQVDLSPSFGSQQAPFQHTWSHNPWEVEESNELKF
VGWNRGGEEWTGSAPLHQESCGSPRNYAPENPFPTGLSSSFSYSTNTQRPAYSNNQMYSF
STVGYSDRLHYPDVSHYPSLASPRRALAWGGSSSGSPYSTALGRGDMSVSPDYGTSYRTG
MERKRRAEGPEMAGTVLTPLKRGKLSYEKVPGRSDGQTRLRFF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagacttcccctgggactgtttctccctggtggtggagtacagcaacacagaa
cactcgccctgggctgccatctgcacagagaggaacatcacccacatcaccttccagacc
aggatacctaattcctctgtgagtgaccctgagtcttggtccctggagcagagtgtcccc
ttcgtgttgtttgtgaccgagggtctgctcagctgtcctctgttgcttcagatactggaa
tcaacgtgtaatatgactgtattggagaggagccactctcagtccttacagatgcttgga
gggactcaccactatgctgtgattacagtagacgaaagcactgcagtcatcattcaagag
caggaggagctgtgtcaagagcgggcctgtgagagtctagtgattcgactgactgctctg
tctctgcagtacagctgctgctggctcatccttcactgccagcaggactctgggttgacc
agtgagggcttcaacaacctggtgttggtctactcctctctggtgctgtttggcctcaag
actgaggacctggatgtcaaggtgctgattgtatcagaagtggtggacattgccaaatgg
atctgccagatagccttccatacactgctgtccagtgacagagatcctctcagctacctg
gacagagagtggctttctgtgatttcctcaaaggaggagaggtgcctcttaggtttcccc
tgtgtgaaccctttggtggcccagctgatgttgagtaggggcccttctctccactggctc
ctgggggcctccctctcccagctgcaggagctgctccctgaggtccctcacaaagttgtc
aagctcttcagtgacaccacgtctctgtacaagctgactgcggctgcctcctccacagag
tctcacattgacttcactcatcagaaagaccacaatagccccactgagccttgggccaca
agcagagacaatcaatacacacacaccgacactcatacaagccgcgatccacacgccgac
tgtaaccgtcacacacaccgcgacccagaaccattcaactccatctgcttcctcgctggc
tcccccagtgctgagagtgtagcggggagcttctatgaagaaagctctgtcatgaccaag
gaagacggtgcagacttccaggtggacttgagtccctccttcggctcccagcaggcccct
tttcagcacacctggagccacaacccatgggaggtagaggagagcaatgagctgaaattt
gtaggctggaatagaggaggagaggagtggacgggcagcgcacccctgcaccaggagtcc
tgtggctcccccagaaactacgcgccagaaaatccatttccgacgggcctctcatcctca
ttcagctacagcaccaacacacagagaccagcgtactccaacaaccagatgtactcgttc
tctacagtagggtacagtgaccggctgcactaccctgatgtcagccactaccccagcctg
gcctcgcctagaagagctctggcatgggggggcagtagcagtggcagcccctacagcact
gccctggggaggggagacatgagtgtgtcacctgactatgggaccagttacagaacgggg
atggagaggaagaggagagcagaaggcccagagatggctggcacagttttaacaccattg
aagaggggaaagctcagttatgagaaggtgccaggccgaagtgatggacagacaagacta
aggtttttctaa
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