Oncorhynchus tshawytscha (Chinook salmon): 112264030
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Entry
112264030 CDS
T05605
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112264030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112264030
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112264030
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Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
112264030
NCBI-ProteinID:
XP_024296405
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Position
LG12:complement(53397109..53441662)
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AA seq
774 aa
AA seq
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MTKQPANAPTGFKPLHQPEGAVGVSANKPYNALNQTSAAYPAPQPAPSNESKTFCPTENK
PGEVSKVYGTFKNAAPAVPGSVAANSALRKDSTSSVGGSAARVVPVQCGDPLRATGDQNN
ASGNWTTMSQTTIILGADGNTSVQPGAVTGVSSQEDESGDENKARGNWTNKLDFILSMVG
YAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLCLAGIPIFLLEVSLGQFASQGPVSVWKAI
PALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNEWNTLDCKDKDML
LLDTCILHDKNITSVKNSSFCLSAQAIGNLTKLVNMTYPDNKTYVSPSEEYFKYNVLHIS
KGIEYPGDIRWPLAGCLLLAWLIVYLSLAKGIKSSGKVVYFTATFPYVVLVILLFRGVTL
PGAGDGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTI
IVCIVNSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEALTRLPLSPFW
AIIFFLMLLTLGLDTMFATIETIVTSVSDEFPQYLRKNKPLFTLICCACFFFLGFPMVTE
NGMYMLQLVDTYAASYSLVIIAICELIGISYFYGLQRFCEDIEMMIGFQPNRFWRICWAF
VTPTILTGILGLSLYQWKVMTYEDYTYPPWSMVMGWLMVVCSVIWIPIMFVIKMYLAPGS
FMERLKLVCSPQPDWGPFLAKHRGERYKNMMDPHGSNSLGLKLPPKDFQLGTYQ
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacagccggccaatgctcctaccggttttaaaccgttgcaccagccggaggga
gcggtgggagtttcagcaaacaaaccgtacaatgcccttaaccaaacgtccgccgcttac
ccggcccctcagccagcaccgtccaacgagagcaaaactttctgtcccacggaaaataaa
ccgggagaagtcagtaaagtctatggaacatttaaaaatgccgctccggcggtgcctgga
tccgtggctgcgaactcggccttacgtaaggattccaccagctcagttggtggttctgct
gcccgggttgtccctgtccagtgcggggacccgcttagagctaccggggatcaaaacaat
gcgtcgggcaactggaccaccatgagtcagaccaccatcattctgggcgcagatggcaac
acgtctgttcagcccggcgccgtgacgggggtaagttcccaggaggacgagagtggagat
gagaataaggccaggggaaactggactaataaattggatttcatcctgtccatggttggt
tatgccgtgggactgggaaacgtgtggaggtttccataccttgccttccaaaatggtgga
ggtgcttttttgatcccctacctgataatgttgtgcctcgccgggatccctatcttttta
ttggaggtttccctgggtcagtttgccagccagggccccgtgtccgtgtggaaagccatc
ccggctctgcaaggttgcgggattgccatgttgataatatctgtcttgatagccatatac
tataacattattatgtgctggacactgtactacctgttcgcttcgttgaagggctcactg
ccatgggctaactgtaagaacgagtggaacacgttggactgtaaggacaaagacatgctt
ctcttagacacgtgcatcctccatgataaaaacattacctctgtaaagaacagctcgttc
tgcctgtcggctcaagccattggaaacctgaccaaactggttaacatgacctatccggat
aacaaaacttacgtcagccccagcgaggagtacttcaagtataatgtcttgcacatctcc
aaagggatagagtaccctggagacatccgctggcctctcgcaggctgcttgttgctggcc
tggttgatagtctacctctccctggccaaaggaatcaagtcatcagggaaagtggtgtat
ttcacagctacgttcccctatgtggttctggtcattctgttgttcagaggagtgaccctc
ccaggggctggtgacggcatcctctacttcatcacacccaagtgggagaaactcaatgat
gctaaggtgtggaaggatgctgccacccagatcttcttctctctgtcagcagcctgggga
ggcctcatcacactgtcttcttacaacaagttccacaacaactgctacagggacaccatc
atcgtgtgcatagttaacagtgccaccagtatattcgctgggttcgtcatcttctccgtc
attggattcatggcccatgaactgaaagtgcccattgagaaggtggcagatgaaggtcca
ggcatagcatttgtggtgtacccggaggctctgaccagacttccactctctccgttctgg
gccatcatattcttcctcatgctgctgaccctcggcttggataccatgtttgccaccatt
gagaccatagtgacgtcggtgtcagatgagttcccccagtatctgagaaagaacaagcct
ctgttcacgctcatctgctgtgcctgtttcttcttcctgggattccctatggtcacagag
aatgggatgtacatgctccagttggtggacacgtatgctgcctcttactctctggtcatc
attgccatctgtgagctaatcggaatctcctacttctatggcctgcagaggttctgcgag
gacattgaaatgatgattggcttccaaccaaaccgcttctggagaatctgctgggccttt
gtgactccaaccattctgactggtatcctggggctgagtctgtaccagtggaaggtgatg
acctatgaggactacacctaccccccctggtccatggtgatgggctggctgatggtggtg
tgttctgtcatctggatcccaatcatgtttgtcatcaaaatgtacttggccccaggcagc
ttcatggagcgtctgaagctggtgtgctcccctcagcccgactggggtcccttcctggca
aagcacagaggggagcgctacaagaacatgatggatccccatggatccaactccctgggc
ctcaaactgcccccaaaagatttccagctgggcacctaccagtag
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