Oncorhynchus tshawytscha (Chinook salmon): 112264078
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Entry
112264078 CDS
T05605
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112264078
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
112264078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_SusR
TPR_16
RPN7
TPR_17
DUF6340
TPR_11
TPR_14
TPR_NPHP3
TPR_BSK1_C
TPR_9
TPR_6
TPR_19
PUB
TPR_YpiA_C
HlyE
Wzy_C_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
112264078
NCBI-ProteinID:
XP_042187504
LinkDB
All DBs
Position
LG12:28846196..29168282
Genome browser
AA seq
2479 aa
AA seq
DB search
MEKQGTFKEKFSIFGSRTVGSAARLVGEEEGDRCGLSKAEFMERVQQSNEACQRGDFQAA
LSLYGDALRADPQNCILYSNRSAAFHKLGCYQAALDDAVKARLLNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAAHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNAEKSTGYM
QQDLEVSKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALTNKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEQPIEMRAY
AGLGHAARCMQDLERAKQYHEQQLAIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLSITQELSDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVTGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPGVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLGIARDTQDRPLEGDASCGLGVVYQSMGEYETALRCHQSDLEIAEETGRPARQG
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVTEGGPDLH
EGGGGGVVSGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTVSPAKDGCSSLPRRPSNLNKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIQ
GLGISSKGHSRRAGPASCGGVSMAAVVGNPRLPSSVMDRWLWGPMPSAEEEALMVSELLG
CHPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTPNPESIPGGAGAGVGTGGRG
AGGGKRGSGGKGRKGSFGSSYTIPETLHLQDDGSDAESICDSPPLQEFLLTAADILDLRL
PVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVSASKVFVHAFYTAL
LNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPE
RARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWHALLTAVGFRLDSAG
TGIPAAVFFPTADPGDRLQQCSTTLQSILGLPPPALQALCKLITASEAGEQLINRAVKNM
VGMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVL
KTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQFVSNPLPLGYPSLP
FSPPCLDSLASDAISVYSLSSVASTMSFASKSECDFLGHRQRGGATAHFSAHKHPHIPRS
RSSPHGAAAAAAGVGRGDDEEYEGFSIISSEPLGSHCDSLPLPPGHGQRHLHRGGRGVVS
SSSSGTGRGYQVSVSSRGSVSTPTSPVKTSLVPSPNPPLQKVPGKVSSSDTGESDQSSTE
TDSTVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGAEGAAAGATARSSAFRSS
ETSAFSRPSSSASVRVQSSPRPKPPSRSSSLQKISSGYNSPAASETSLKDGSHPSPTLDS
HAQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPACSAPSPALSYSSTGSACSSPADAPDL
DRLRRGVIDEKVVAIHNLKTFWANTASQQQQQHLGPVRALRGAPGPLVSAKRDVLSLLNL
SPRHCSPSDAQDSLELRELGLQSLDRGNKNPSNGHNPRKMAPSPSISTSSSPGARSIRLP
AGNGYKFLSPGRFFPSSKC
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaaggaacttttaaggaaaagttttcgatcttcggctcccggacagttggc
agtgcggcacggcttgtgggtgaagaggaaggggaccgatgtggcctcagcaaggcagag
ttcatggagagagttcagcagagcaacgaggcgtgccaacgcggcgacttccaggctgcc
ttgagtctctatggcgacgccctgcgagccgacccacagaactgcatcctctacagcaac
cgctcagcagcctttcacaaactgggatgctaccaggctgccctggacgacgctgtcaag
gcccgtctactcaaccccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcgttggccgccttcgcctcggggctggcccaagacccc
aagagcctgcagctactggttggcatggtggaggctgccatgaagtccccactacgagag
tccctagaacccacctaccagcaactgcagaagatgaagctggacaagagtccattcgtg
gtggtgtcagtgattggtcaggagctgctgacggcggcccaccacaccgcatccgtggtg
gttctggaggccgcgttaaagatcggtacctgcagcctcaagttgcgtggctccgtcttc
tcagccctcagcagcgcccactggtccctgggcaatgcagagaagagcactggatacatg
cagcaagacctggaggtctccaagacactaggtgaccaaacaggtgaatgccgtgcccat
ggcaacctgggctcagcattcttctccaaggggaactaccgcgaggccctgaccaaccac
cgccaccagctggtcctggctatgaagctcaaggacagggaggcagcttctatggctctg
agcagcctgggtcatgtgtatacagccatcggggactaccctaatgccctggccagccac
aagcagtgtgtcctactggcaaagcaatccaaagaccagctgtcagaggcacgagagctg
ggcaacatgggcgctgtctacattgctatgggtgactttgaaaacgctgtacaatgccac
gagcagcacctgggcatcgccaaggccctgaccaacaagagggaggaggcccgtgcctac
agcaacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccac
acccatgtgctggagctggcccaggagctggaggagcagcctatagagatgagggcgtac
gctggactgggtcatgctgcacgctgcatgcaggacctggagagagccaagcagtaccat
gaacagcagctggccatcgctgagggcctgaaggacagagctgcagagggaagagcctcc
tccaacctgggcattatccaccagatgaaaggagactatgagactgcacttaaactccac
aaaacccacctctccatcacccaggagctcagtgactatgctgcccagggtcgggcctat
ggtaacatgggcaatgcctacaacgcgctgggggcctttgaccaggccgtacgctatcac
cgccaggagctacagatctccatggaggtcaatgaccgggcctcacaggcctctacccat
ggtaacctggccgtggcctaccaggccctgggggcccacgatcgtgccctgcagcactac
cagaaccatctcaatatcgcccgtgagctgcgagacgtccagagcgaggctcgcgccctc
ggcaatctgggaaacttccactgctcccggggagagttcccccaagccgtgccctactac
gagcagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaagtctgc
cacaacttgggctacgcccactactgcctgggaagctatcaggacgctgtcaagtactat
gagcaggacctggctctggctaaggacctacatgacaagctgagccaggccaaggcctac
tgtaacctgggactggccttcaaggctctgggtgacttcaccaaggcagaggagtgtcag
aagtacctgctctctctagcccagtctcttaataatgcacaggcccgcttcagagccctg
ggcaacctgggggacatctttgtctgcaagaaggacgtgactggggctatccaattctat
gagcagcagctggccctagctcaccaggtgaaggagcgcaggatggaggcgtgtgcctac
gcggccctgggtgccacctacagactggtgcagaagtacgacaaggctctgggctaccac
acccaggagctggaggtgtaccaggagctgggcgatgtgcctggggagtgtaaagcccac
ggccacctggcagccgtctacatggctctggggaagtacgccatggccttcaagagctac
gaggagcagctagagctgggccgcagactgaaggaccccggggtagaggcccaggtctat
ggcaacatgggcatcaccaagatgaatgtaggggtgatggaggaggctataggctacctg
gaacagcagctggccaccctccagcagctgagtggcaacgaggccgtgctggaccggggt
agggcctatggtaacctcggagactgttacgaggccctaggggactttgaagaggccatt
aaatactatgaccagtacctgtctgtggcccagagccttaaccggatgcaggaccaggag
aaggcctaccgaggcctggggaatggacacagggcgatgggtaacctgcagcagtccctg
gtgtgttttgagaagcgtctggtggtggcccatgagctgggggagtgtggagggaaggcc
caggcctatggggagctaggggcgctccacagccagttggggaactatgaacaggccatc
tcctgtctggagcgccagctaggcatcgcccgtgacacccaggaccgcccactagagggc
gacgccagctgtggcctgggcgtggtctaccagtccatgggagagtacgagacggccctg
cgctgccaccagagtgacctggagatcgcagaggagacgggcaggcccgcccgacagggc
cgagcctatggcaacctgggcctcacctacgagtcgctaggcaactatgagcgtgcagtg
gtgttccaggagcagcatctgagtgttgcagctcagaccaacgacctggcggccaagacc
ctagcctacggcagtctagggaggacacaccacgcactgcagaactactcacaggctgtc
atgtacctgcaggaaggcctacgactggcagagcagctggctcggcgtgaggacgaggct
aagatccgccatcgtctggggctgtctctgtgggccagtgggaacctggaggaggcccag
caccagctctaccgagcatctgcattgtttgagacgattcgtcatgaggcccagcacagc
accgactacaaactttctctgtttgacctgcagacctcctcctaccaggcactccagagg
gtccttgtcagcctaggccaccatgacgaggcgttggcagtggcagagcggggtcggacg
cgggcctttgctgacctgctggtggagaggcagacaggccagcaggactcagacccctac
accccagtcacagtggagcacatcctggacacggtgaacagccagagggccctggtgctc
tacttctccatggctgctgggtacctgtacagctggctgctggctccaggagcaggcatc
ctgaagttccatgaggtgtacttgggagagggcgtgacagagggcgggccagacctccat
gagggcgggggagggggtgtggtcagcggctcgtctctggagcagcacattgccagtgct
cgggaggccctgggagtagaatcctactacagcaggggttgttctagcagtgagacagag
agtgaggcaggggacctgttggaccagcagtttgaggagctcaacaacaaactcaactct
gtgactgaccccacaggcttcctccgcatggtgtccagaaacaacctgttcaacaggagc
tgccagagtatgactagcctgttcagtaacaccgtgtccccagccaaagatggctgctcc
tctctgccccgccgacccagcaacctcaacaaacctcctctccgtgccctctacgacctg
ctcatcgcacccatggaagggggcctgatgcattccagtggtcccgtgggtagacacaga
cagctgatattggtattggagggggagttgtacctcatccccttcgccctgctgaagggc
agctcctctaatgagtacctgtatgaacgcttcagcctcatcgccgtgccctccatccag
ggtctgggaatcagctccaagggtcattctcggcgggcggggccggcttcctgtgggggc
gtgtccatggcagctgtggtgggtaaccctcgtctgccgtcctctgtgatggaccgctgg
ctgtgggggcccatgccctcggccgaggaggaggccctcatggtgtctgagctgctgggc
tgccatccactggctggatcctctgccaccaaggagagggtgatgagtgccctcacccaa
gccgagtgtgcccacttcgctacccacatctcctggaagctggccgccctggtgctcaca
cccaacccagagagcatacccggcggggcaggggcgggtgtggggactggagggagaggg
gcagggggcgggaagagaggcagtggaggcaagggcaggaagggctcatttgggagcagc
tacaccatcccagagaccctgcacctgcaggatgatgggagcgacgcggagagtatctgt
gacagccctcccctgcaggagttcctgctcaccgctgctgatatactggacctgaggctg
cctgtcaaactggtggtgctgggctcataccaggagtccagcagtaaggtgacagcagac
ggtgtggtaggtctgaccagggccttcctggctgctggggcccagtgtgtcctggtgtct
ctgtggcctgttcctgtgtcagcctccaaagtgttcgtccatgccttttacaccgctctg
ctcaacgggaccaaggccagtgctgccctcgcagacgccatgaagactgtccagagcagc
aagcagtactcccacccctccaactgggcaggctacatgctgattggtaatgatgtgaag
ctgaacagcccctcgtccctgattggccaggcactagcagagatcctacagtatccagag
agagcacgggatgctctgcgggtcttactgcaccttgtggagaagtctctccagaggatt
cagaacggccagcgtaactccatgtacacgtcccagcagagtgtggagaacaaggtgggg
ggcgtcccaggctggcatgccctgctgaccgctgtgggcttccgcctggactcggctggc
accggcatccctgctgctgtcttcttccccacagcagaccctggagacaggctacagcag
tgtagcaccaccctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgt
aaactcatcaccgcctccgaggcaggagagcagctcatcaaccgggctgttaaaaatatg
gtgggaatgctccaccaggtgctggtccagcttcagacaggggagaaggagcaggacttc
tctctgctgcccatccaagtgtccatcagtgtgcagctctggagactgccaggctgccat
gaatttctggctgcactgggatttgacctgtgtgaggtgggtcaggaggaggtggtactg
aagacgggcaagcaagccaaccgccgcaccatgcactttgccctccagtccctgttggca
ctgtttgactccacagagctgccaaagcgtctcagcctggacagctcgtcctccctggag
tctctggcctcggcccagtttgtctccaaccccctaccactgggctaccccagcctgccc
ttctccccaccctgcctggacagtctggcctcagacgccatctccgtctacagcctgagc
tccgtggcctccaccatgagctttgcctccaaatcagagtgtgacttcctgggccatcga
cagcgtggtggggccacagcacacttctctgcccacaagcatccgcacattccccgcagt
cgctcctctcctcacggggcggctgcagcagcagcaggtgtgggccggggagatgacgag
gagtatgaaggcttttccatcatcagcagtgagcctctgggaagccactgtgactccctg
cctctacctccgggtcacgggcagcgccacctccaccgtgggggcaggggtgttgtcagt
agttccagctcgggcactgggcggggttaccaggtgtctgtgtcgtctcgaggcagtgtc
agcacccccacctccccggtcaagaccagcctggttcccagccccaaccctcccctccag
aaggtgccaggcaaggtgagcagctcagacacaggtgagtcggaccagtccagcacggag
acagatagcaccgtcaagtcccaggaggagaagactgtccctctggacccccaggagctg
gcccagaagattctggaggagacccagagccacctgcgggcggtggggagtttacaacgg
gctggggctgagggggctgcagctggagctacagcccggagctctgccttccgctcctca
gagaccagcgccttcagccgtcccagcagcagcgccagtgtccgtgtccagtcctcccca
cgacccaaacctccctcccgctcttcctccctgcagaagatcagctctggttacaacagc
cctgcagcctcggagacctctctaaaggatggcagtcacccctcccctaccctggacagc
cacgcccagttcaagctcaaataccccagctccccctatagtggtcacatctcccgctct
cccagtaacgtgtcccccagctctggccaccagtccccagcttgcagtgccccatcccca
gctctctcctactcctccacgggctctgcctgctccagccctgccgatgccccagacctg
gaccgcctcaggaggggcgtcatcgatgagaaggttgtggccatccacaacctgaagaca
ttctgggccaacacagcgtcccagcaacagcagcagcatctgggtccagtccgggctctc
cgtggcgccccaggacccctggtctctgccaagagagatgtgctgagccttctgaacctc
tccccacgacactgctcccccagcgacgcccaagacagcctggagctgcgggagctgggg
ctgcagtcgttggacaggggcaacaagaacccttccaatggacacaaccccagaaagatg
gccccctcgccctctatttccactagcagcagccctggtgctcgctctatcagactacct
gccggcaatggatacaagttcctctcccctggcaggtttttcccatcctccaaatgctga
DBGET
integrated database retrieval system
