Oncorhynchus tshawytscha (Chinook salmon): 112264079
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Entry
112264079 CDS
T05605
Name
(RefSeq) neurexin-3a isoform X1
KO
K07377
neurexin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112264079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264079
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112264079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
Syndecan
EGF
Protocadherin
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
112264079
NCBI-ProteinID:
XP_042181122
LinkDB
All DBs
Position
LG08:9766116..10314970
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AA seq
1305 aa
AA seq
DB search
MLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLAHIVDPKMKIQ
GDVMFKCENVATLDPVSFETPEAYISLPKWNTKRMGSLSFDFRTSEPNGLILFTHGKPQE
RKEAQRSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKATQNKVNDGAWYHVDMQRDRR
SGTISVNSRRTPFMSSGESEILDLEGDMYLGGLPSDRTNLILPTELWTAMLNYGYVGCVR
DLFIDGRSKDIRQIAEAQNGAGIKPSCNKVVGKQCESYPCKNRGVCKEGWNRFICDCTGT
GYWSRTCEREASILSYDGSMYMKVVMPQVMHTEAEDVSLRFMSQRAYGLLMATTSRESAD
TLRLELDGGRVKLTVNLDCVRINCTSSKGPETLYAGQKLNDNEWHTVRVVRRGKTYKLTV
DDDIAEGQMAGDHTRLEFHNIETGIMTERRFVSTIPSSFIGHLQSLRFNGMLYIDLCKNG
DIDFCELNARFGMRSIIADPVTFKSKSSYLSLATLQAYTTMHLFFQFKTTSPDGFILFNS
GDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRALHDNQWHNVVITRDNSNIHTLKVD
AKATSQVVNGAKNLDLKGDLFIAGLGPGMYGSLPKLVASRDGFQGCLASVDLNGRLPDLL
QDALFRSGQIERGCEGPSTTCQEDSCTNMGVCIQQWENYTCDCSMTSFTGTRCNDPGTTY
IFGKGGGLITFKWPANERPSTRTDRLTVGFSTSLKDGILVRIDSAPGLGDYLMLHIEQGK
IGVTFNIGTMDISVRENSTPVNDGLYHVVRFTRNGGNATLQVDNWSINEHFPGATTDNER
LEIATKKFPLKYARPVVDWLQEKGRQLTIFNTQALVTIGGSDRSRPFQGQLSGLYYNGLK
VLNMAAEGNPNIKINGSVRLVGDTPSVAGSARTTAQPPELSTTFIETTTIMSTTTTRKHR
SSPTVQQTTDDMVSSAECSSDDEDLEECDSGRAGGLGGELVIPVLLEDQLVLPPSIPLPT
LCPPLTINETTKESLSKATEAGVPCLSDRGSDDCDDCDDDDGLVISGYDFDSNLPPTDDE
ELYATFSLVTDKTLSTSAFEGGYKAHQPKWETKDFRPNKPSSDRGRTTTTAVLPLAPDQS
RYTSTSALHHTSPAKLPAGKMNNRELKPQPDVVLLPLPTLPYEVDSTKQRAPVITSPMFH
TVPTALPTQPVINRVPGPPEVSRQSSSTIGMVVGIVAAAALCIVILLYAMYKYRNRDEGS
YQVDESRNYITNSATQSNGAAVKDKQQSSKAVKGKQKNKDKEYYV
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgctgggatccgatgacttcttctacgtgggtggaagccccagtaccgccgacctgcct
gggtctcctgtcagcaacaacttcatgggctgcctcaaagaggtggtctacaagaacaac
gacatccgtctggagctctcccgtctggcgcatatcgtggaccccaagatgaagatccag
ggggatgtgatgtttaagtgtgagaacgtggccaccctggaccctgtctccttcgagacc
cccgaggcctacatcagcctgcccaagtggaacaccaagagaatgggttccttgtccttt
gacttcaggacctcggaacccaacggactcatcctcttcacgcacggcaagcctcaggag
cgcaaggaggcccaacgcagccagaagaacaccaaggtggacttctttgcggtagaactg
ctggatggcagtctgtacctgctgttggacatgggctcagggaccatcaaggtcaaagcc
acccagaacaaggtcaacgatggagcctggtaccacgtggacatgcagagggacaggcgt
tcagggaccatctcagtcaacagccggcgcactccgttcatgtccagcggagagagtgag
atcctagacctggagggggacatgtacctaggtggtctaccctcagaccgcaccaatctc
atcctgcccactgagctgtggaccgccatgctcaactacggctacgttggctgcgtgcgc
gacctcttcatcgacgggcgcagcaaggacatccgacagatcgctgaggcccagaacggg
gccggcatcaagccgtcatgcaacaaggtggtggggaaacagtgtgagagctacccgtgt
aagaacagaggcgtctgcaaggagggatggaaccggttcatctgcgattgtaccggcacg
gggtactggtcacgtacctgcgagagagaggcgtccatcctgagttatgatggcagtatg
tacatgaaggtggtgatgccccaggtgatgcacacggaggcggaggacgtgtctctgcgt
ttcatgtcccagcgggcctacggcctgctcatggccaccacctcgcgagaatcggccgac
acgctgcgtctagagctggacgggggccgggtcaagctcacggtcaacctagactgtgtc
aggataaactgtacttccagcaagggacccgagaccctgtatgctgggcaaaaactcaat
gataatgagtggcatacggtacgcgtggtccgccggggaaaaacctacaagctcacggtg
gacgatgacatagcagaaggccagatggcgggtgaccacacccgtttggagtttcacaac
atcgagacgggcatcatgacggagagacgcttcgtctcgaccatcccctctagcttcatt
ggacacctacagagtctcaggttcaacggtatgctgtatatagatctctgtaagaacgga
gacatcgacttctgtgagctcaacgcccgctttggtatgcgctccatcatcgctgaccct
gtgaccttcaagtctaagagcagctacctgagcctggccaccctgcaggcctacaccact
atgcacctcttctttcagttcaaaaccacctcgcccgacggattcatactgttcaacagt
ggagacggcaacgacttcatcgctgtggagctggttaaagggtacatccactatgtgttt
gatcttggcaatgggcccaacgtcatcaagggcaacagcgaccgggctctacatgacaac
cagtggcacaatgtggtcatcactcgtgacaacagcaacattcacactctgaaggtggac
gccaaggcaaccagtcaggtggtcaacggagccaagaacctcgacctgaaaggtgatctg
tttatcgctgggctgggccctggtatgtacggtagcctgcccaagctggtggcatccagg
gacggtttccagggctgcctggcctcagtggacctcaacggccgcctccctgacctcctc
caggacgcgctgttccgcagcgggcagatcgagcgcggatgcgaaggtcctagcaccacc
tgtcaggaggactcatgtaccaacatgggcgtctgtatccagcagtgggagaactacacc
tgcgactgctccatgacctccttcaccggcacgcggtgcaatgatcctgggacaacctat
atctttgggaaaggaggaggcctcatcacgttcaaatggccagccaacgagaggcccagc
acacgtacagacaggctgaccgtggggttcagtacctccctaaaggacggcatcctggtc
cggatagacagcgctccaggtcttggagactatctcatgctccacatcgaacaagggaag
attggtgtgacgtttaacatcggcacaatggacatcagcgtgagagagaatagcacacca
gtgaatgacgggctgtaccatgtggtgcgctttaccagaaacgggggtaacgccacactc
caggtggacaactggtctatcaatgaacacttcccaggagcgacgaccgataatgaacgt
cttgaaattgccactaagaaattcccgttgaaatacgcccggccagtagtggattggcta
caagagaaaggccggcagcttaccatattcaacacccaggccttggtgaccatcggtggc
agcgaccgcagtcggcccttccagggacagctgtccggcctctactacaatggcctgaag
gtcctcaacatggccgccgagggcaaccccaacatcaaaatcaacggcagcgtccggttg
gtgggtgacacgccctctgtggccgggtcggcccgcaccaccgcccagccgcccgagtta
tccaccacctttattgagaccaccaccatcatgtccaccaccaccacccgcaagcaccgc
tcctctcccaccgtacagcagacgacagacgacatggtgtcttcggcagagtgttccagt
gatgacgaggacctggaggagtgtgactctggccgtgcaggtgggctaggaggtgaatta
gtcatccctgtactcttagaggaccaattagtgttacccccgtccatccccctcccaacc
ctctgcccacccctcaccataaatgaaaccaccaaagagtccctgtccaaggccactgag
gccggggtaccttgcttgtcggaccgaggcagcgatgattgtgatgattgtgatgatgat
gatggcttggtgatatctgggtatgattttgactctaacctgcctcctactgatgatgaa
gagctttacgccaccttctccttggtaacagataagaccttgtccacgtcggcttttgaa
ggtggctacaaagctcaccagcccaagtgggaaaccaaggactttagacctaacaaacca
tcctcagaccgcggtaggactaccactaccgccgtgctgccactagcacccgaccagagc
cgctacacctccacctcagccctacaccacacgtcacccgccaagctgcctgccggcaaa
atgaataaccgcgagctaaaaccccagccagacgtagtgttgctcccgttgcccacccta
ccctatgaggtagacagtaccaagcagagggctcctgtaataacctcccccatgttccat
actgtacccacagccctgcccacccagcccgtcatcaacagagtcccgggacccccggaa
gtgtcccgccagtctagcagcaccatcgggatggtcgtggggatagtggcggccgcagcc
ctgtgcatcgtcatcctcctgtacgccatgtataagtacaggaacagggacgagggttcc
taccaggtggacgagagcaggaattacatcaccaactcggcaacgcagagcaacggagcc
gccgtgaaggacaaacagcaaagctcgaaagctgtcaaaggaaaacagaaaaacaaggac
aaggagtattacgtttga
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