Oncorhynchus tshawytscha (Chinook salmon): 112264085
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Entry
112264085 CDS
T05605
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112264085 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112264085 (usp43a)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112264085 (usp43a)
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112264085 (usp43a)
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112264085 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
112264085
NCBI-ProteinID:
XP_042159364
UniProt:
A0A8C8LX36
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All DBs
Position
LG02:complement(67090226..67206337)
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AA seq
1273 aa
AA seq
DB search
MDNHKESKTRKQSMKTKSTKRKEKKYKAGKLFRRKSLKSVGNFMSRILKTLGTLAHFGDV
EPPDGEDDDGGFRDSAACTLSANSGNFNKDEFRVSREIKVKKSASTLSSHGSIKDRLSWC
YGDKTPGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDLCQGRVNGIVKNEDA
QLARGEVTTQLASLVRALWTLEYTPQLSVEFKSIVSKYGSQFRGNSQHDALEFLLWLLDR
VHEDANPTTNNNHSSSKTKANGKGLLGGVEESPVSGPAAAQQPGTRHSFVQDHFQAQYRS
SLTCPHCLKQSNTFDPFLCISLPIPLRQTRCMSVTLVFSTKGQRYLRVGLAVPLIGSISC
LRAMVAEEGKTTPDQVVLSELYATGFQRSFSDDDDLTSVAESDVVYAFQAPPLHTRGGST
RMSGYHHSLPSSPYTSGPEGQRLPPSTTLSSEFLNHGGSTKVLLVICNTAGSGQQAVRFG
PPFLMREERTLSWDQLQQSILSKLYYLMLNGSQAQNAGLLFKVRVVGGSASYSYLSPQDG
RPLFHPAVDRALKLCGPGGPPHVKLVIEWEHKIKECLFGNIQEEVVKDSESVRVQQQQHL
QQHSCTLDDCFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQV
GERRNKLSTQVRFPLAGLDMAPHVVKRSQSMRNLGDLGPWPPTWKQPEGSSHHISHPDMA
LPPDFLYDLYAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPEEEVCTRGAYIL
FYQRRNVIPPWSASSSIRGSTSSSMSDHWLVRLNGDSKRGSLVSRSSTTCPSSVHDSPES
PVFLDDLPREEEGEGPGKHEVHGKPKKGGFETRPFVRGIQGRSVSMRTPTKNKETLNKVF
PLRWSFGSKDRQNIAAEAAPAPIPAPVELVEYLESGRRPRCTKDSIVNLMTGSESRKSPA
ISSPNVGSSLNCMGQSESPQMPEGQRRPVTDKTETSLRRSSKGSHQQQRDQGDQRDQRDE
GRMGSSSSTNTLTRRSTKKSKEKDQGKPQEAPSRRGSSAGIQSSSSTHSLRDRDWEGTLR
RGTKGHQDPPPRDCMVPPEGEKRRKGEKVEEASKSHEGLLSFFKSNFKKKDKESSSSRKS
DSGKVGDVGGSSISQLSLSSGAPGGATKTGEAKSNGAPRNGSANRLGDELPNGKARRAAA
AHIKRSQSSSNIPSKEESSMRRTASLHRKGMSHDVAPPPRSLTAETPSYGTLQRTRYSTN
SLGRKRTVPESSF
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggataaccacaaggagagtaagacgaggaaacagtcaatgaaaaccaaatctacaaaa
cgcaaagagaagaaatacaaagccgggaagcttttcaggaggaaatcgttgaagtccgtt
gggaattttatgagcaggatactgaaaactttgggaactttggcacactttggcgacgtc
gagccacctgacggtgaggatgatgatggcgggttcagagacagcgccgcgtgcacgttg
agtgccaactcagggaattttaataaagatgaatttcgggtctcgagggagattaaggtg
aagaagagcgcctcaactttgtcttctcatggatctataaaagacaggctgtcgtggtgc
tatggcgacaaaactccaggagtccttgggttgaagaatcatggaaacacttgtttcatg
aatgcggtggttcagtgcctcagtaatacggacctgctggccgagtacctcggtttggaa
caatacaagtctgatttgtgtcaggggagagtaaacggaattgtaaaaaacgaggacgcg
caacttgccaggggtgaggtgaccacacagttggcatccttggtgcgggcgctttggacc
cttgaatatacacctcaactgtccgtggaattcaagagtattgtgtccaagtacggctct
cagttcagagggaactctcagcacgatgccctggagttcctgctctggctcctggaccgg
gtccatgaggatgccaaccccaccaccaacaacaaccacagcagcagcaagaccaaagcc
aacggaaagggcctgcttggtggagtggaggagagccctgtctccggcccagcagcagca
caacagcctgggacgcggcacagcttcgtccaggaccactttcaggcacagtacaggtcc
tccctgacatgtccacattgccttaaacagagcaacacctttgaccccttcctctgcatc
tcactgcccattcccctgcggcaaaccaggtgtatgagtgtgaccctggtgttcagtacg
aagggtcagaggtatttacgtgttggtctggctgtgcctctcatcggctccatctcctgc
ctgcgtgccatggttgctgaggagggcaagaccacgccagaccaggtggtcctgtcagag
ctctatgccaccggcttccagcgttcgttctctgacgacgacgatctgacaagcgttgct
gagagtgatgtggtctatgccttccaggctccgcccctccacacacggggaggctccacg
cgaatgtcgggctaccaccacagcctcccatcctcgccgtacacctcagggccagagggt
caaaggttacccccatcgaccactctgtcctcagagtttctgaaccacggtggttccacc
aaggtcctcctcgtaatctgcaacacggcaggctccggccagcaggctgtcaggttcggc
cctcccttcctcatgagagaggagcgtaccctgtcctgggaccagctccagcagagtatc
ctcagcaagctctattacctgatgctgaacggatcacaggctcagaatgcagggttgctg
ttcaaggtcagagtggtgggaggatctgcctcctacagctacctgtccccacaagatgga
cgccctctcttccaccctgccgtggacagagccctgaagttatgtggcccaggaggacca
ccccacgtgaagctggtgattgagtgggaacacaagatcaaggaatgtctgtttggtaac
atccaggaggaggtggtgaaggactcagagagtgtgagagtccagcagcagcagcacctg
cagcagcacagctgtaccctggacgactgctttcagctctacaccaaagaggaacagctg
gccccagacgacgcatggaagtgtccccactgtaagcagctccagcagggcatggtgaag
atgtcactgtggaccctccccgacatcctcatcctccacctcaaacgcttccgacaggtg
ggcgagcggcgcaacaagctgtccacccaggtgcgcttccccctggccgggttggacatg
gccccccacgtggtgaagaggtcccagagcatgaggaacctgggggacctgggaccctgg
ccccccacatggaaacagcctgaaggcagcagtcatcatattagtcacccagacatggcc
ctgcctcctgacttcctctatgacctctatgcagtgtgtaaccaccatggtgggatgcac
ggcggacattacacagcgtactgcaggaactcagtggacggtcagtggtacagctatgac
gacagcagtgtggacctggtgcctgaggaggaggtgtgtaccaggggggcctacatactg
ttctaccagagacgtaacgtcatccctccctggtccgccagcagctcaatcagaggctcc
accagttcctccatgtcggaccactggctggtccgtctgaatggggacagtaagaggggt
agtctggtatcccgctcttccaccacctgcccctcctctgtccacgactccccggagtcc
cccgtcttccttgatgacctgcccagagaggaggaaggtgaggggcctgggaaacatgag
gtgcatggtaaaccaaagaaaggtggttttgagaccaggccgttcgtacggggcatccag
ggtcgtagcgtcagcatgaggacccccacgaagaacaaagagacactgaacaaggtcttc
ccgctacgctggtcgttcggctccaaggaccgccaaaatattgcagccgaggccgcccct
gctcccatccctgcccctgtggaactggtggagtacctagagtctggaagaagacctcgt
tgcaccaaggactctatagtcaatttaatgacgggctctgagagccggaagagtcctgcc
atcagctcccccaatgtgggaagcagcctgaactgcatgggacaatcagagtctccgcag
atgccagagggccagagaagaccagtcacagacaagactgagacgagtctgagacgaagt
agcaaagggtcccatcagcagcagagagaccagggggatcagagagaccagagggacgag
ggtaggatgggcagtagtagtagtactaacactctgaccaggaggagcaccaagaagagt
aaggagaaggaccagggaaagccccaagaggccccatctaggagggggtctagtgcaggc
atccagtccagctccagcacccacagcctcagggacagagactgggaaggcaccctgagg
agagggaccaagggccaccaggacccaccaccaagggactgtatggtaccacccgaggga
gaaaagagaaggaagggtgagaaggtagaggaggcctccaagagccacgaggggctgctg
tctttcttcaaaagcaacttcaagaagaaggacaaggagtcgtcatcgtctcgcaagtcc
gactctggaaaagttggcgacgtcggcgggtccagcatctcccagctgtccctgtccagt
ggagccccaggcggggccacgaagacgggggaggcgaaatccaacggagccccccgcaac
gggagtgccaatcgtctcggagacgagctgcccaacggtaaagccagacgcgccgctgct
gcccatatcaaacgctctcagagctcatccaacatccccagcaaggaggagtctagcatg
cgaaggaccgcctctttacaccgcaaagggatgtcccatgacgtggctccgccccctcgc
agcctcacagcagagacgccctcctacggtaccctgcagaggactcgctatagtaccaac
tcactgggacgcaagaggacggtccccgagtccagcttttag
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integrated database retrieval system
