Oncorhynchus tshawytscha (Chinook salmon): 112264107
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Entry
112264107 CDS
T05605
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112264107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264107
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
GGA
112264107
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
FTZ
Motif
Other DBs
NCBI-GeneID:
112264107
NCBI-ProteinID:
XP_024296471
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All DBs
Position
LG02:complement(66987912..66995538)
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AA seq
723 aa
AA seq
DB search
MADAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW
EAIQALMVLEACMKNCGKRFHNEVGKFRFLNELIKVVSPKYLGDRVSEVVKKRVVDMLFS
WTLSLPNEAKISDAYQMLKKQGIVTVDPELPLDKTLMPSPSSRPKNPVFENEEKSKRLAE
LLKSKKPEDLQEANRLIKNMVKEDEVRLQRASKRSSTLEEVNNSVKLLNEMLSHFSRDQS
TDGDKELIKELYGDCDKLRGTVFKLATETEDNDSSLGDILQASDDLSRVINSYKRIVEGQ
TVNGEMEPLGLSTTTQCTKDSNHSEILVDLAGLDLQSPSPPEDPPLAQHADFIPADLLYG
SAPLQDLQACPAMEDPSPRKPSAALSLLDKELLSLGLNDPVPAKDDLNNPWRTFLQAPNP
VLDLFGSALPATVFSAASTDQLGASTTEPVSKTAAPQSSVAASFPYPSAAAQAVSASLNH
SLQDLDMLDLGSPKSMPGVINTGDLFGMGEAMGATASPRIGIPASRSSPLPLGILPAAAA
AAPTLSPKTQADDSPLLRSLSPILILPLGQASPAKFPEISLSNVHVPLEAIKPSKLCPVT
AYDKDGVRVLLHFATDCPPGRPDVLVMVVSMLNTAPLPVRNMVLQAAVPKSMKVRLQPPS
GTDLAPFNPIFPPAAITQVMLLANPLMEKVRMRYKLTFTLGEQQCTETGEVDQFPPAEIW
GAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcggaaggggagtcgctggagtcgtggctcaacaaagccaccaacccatcc
aacaggcaggaagactgggagtacattataggattctgtgaccaaatcaacaaggaattg
gaaggcccacagattgctgtgagattgttagcccataaaatccagtccccacaagaatgg
gaggcgatacaggctttgatggttttagaagcttgcatgaagaactgcgggaaaaggttc
cacaatgaagttgggaaatttaggtttctaaatgaactcatcaaagtggtgtcacctaaa
tatctaggtgacagagtgtcagaggtggtgaagaagagagtggtagatatgctcttcagc
tggacactctctttacccaatgaggccaagatcagtgatgcttatcaaatgctgaagaaa
caaggtattgtcacagttgaccctgagcttcctctggataagacactgatgccgtcgccc
tcctcccggcccaagaaccctgtgtttgagaacgaggagaagagcaagcgactggccgag
cttctgaagagcaaaaagcctgaggatctacaggaggccaaccgcctcatcaaaaacatg
gtcaaagaggatgaggtgaggctgcagagagcgtcgaagcgcagcagcaccctggaggag
gtcaacaacagtgttaaactgctcaacgagatgctcagtcacttcagcagggaccaatca
acggacggagacaaggagcttatcaaagagctttacggtgactgtgacaagttgaggggg
actgtgttcaagctggccacagagacagaggacaatgacagcagcttaggtgacatattg
caggccagtgatgacctgtcccgtgtcatcaactcctataagaggattgtggagggacag
actgtcaatggagagatggagccacttggactgtcaactactacacaatgtaccaaagac
agcaaccattctgagatcctggtagacctggctggtctggacctccagagcccctcccca
ccagaggatcctcctctagcccagcacgcagacttcatcccagccgacctgctgtacggg
tctgcccccctccaggatcttcaggcctgccctgccatggaggaccccagtcccagaaaa
ccctctgctgcactgtctctactggacaaggagctcctctctctaggacttaatgaccca
gttcctgcaaaagatgacttgaataatccgtggaggacatttttgcaggctcccaaccca
gttttggacctgtttggcagcgccctcccagctactgtattctctgcagcttctacggac
cagttaggagcttctacaacagagcctgtttctaagacagccgccccacaatcctcagtg
gcggcctccttcccctaccccagtgctgctgcccaggcagtctccgcctccctgaaccac
agtctgcaggacctggacatgttggatttgggtagccccaagagcatgcctggtgtgatc
aacactggcgacctgtttgggatgggtgaggctatgggtgccactgcctccccgagaatt
gggatccccgcctccagatccagccctctccctctgggtatcctaccggctgctgctgct
gcagcccctaccttgtcccctaagacccaagctgatgacagcccccttctccgctccctg
tcccccatcctgattctcccgctggggcaggccagcccagccaagttccctgagatctcc
ctaagtaacgtccacgtccccctagaagccatcaagccaagcaagctgtgtcctgtgacg
gcctatgataaagacggggtccgcgttctcctgcactttgccaccgactgtccgccgggc
cggccggacgtgctggtgatggtggtgtccatgctgaacacggcacctcttcccgtcagg
aacatggtcctacaggctgctgtacccaagtcgatgaaggtgagactacaaccgccctcg
ggaactgacctggcgccttttaaccccatctttccccccgccgccatcactcaagtcatg
ctgctggccaacccactaatggagaaggtccggatgagatacaagctgacgttcacactg
ggagagcagcagtgcacagagactggggaggtggaccagttccccccagccgagatatgg
ggggctctatag
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