Oncorhynchus tshawytscha (Chinook salmon): 112264109
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Entry
112264109 CDS
T05605
Name
(RefSeq) protein shortage in chiasmata 1 ortholog-like
KO
K28108
shortage in chiasmata 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112264109
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112264109
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
112264109
NCBI-ProteinID:
XP_042187032
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Position
LG12:complement(37837093..37844599)
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AA seq
923 aa
AA seq
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MNWLALPMPYHLGSSDLYPHTGNPPEVTYRKPWSRGNVISNCKLFVSGSVLDDLGIKGQP
TYSLEKLSVSLTQMRVDLLEVIPSSNPNSQLDLDRDEAAWVLREARKDKGHFVCNESFSK
STGEKMSPRHQRDDLVMPEEVLFVDHLPQFRKHLPSMKAKLSRLRNLPVSDPLLSSTGGT
LSEEAIFRHCVAYEVPLDAETESSETCSNTDEDFSKESLLNEESLMLPVEMDTCTPKRED
CLPFSNIPKLLNVVPELIEERTSCLDMLTKATPPDALESVDISQFEVPRLPLNDSHCEIN
EMLLDLKSSDHLVLPTQMEMDLPLTPSPKPNLTQLCLASSQLPAEQISPLYRYYFVSEKD
QEEMEEALWRAEKHLDLVVGFLLAEPQKSESVVQLQPLTEVLLGIGRDNSVRLDEGMELS
LLGTNSPELIGMYGNGSSDFTESMMISDQPHLMEALSSMIEDFTLLSPCQMDNILRESVD
DSELSGPPSEIKCRSILKNATPMVVPYHQEREGAGNTVVSAPAVATSQERERTGNVALTA
QASTSSQEKERSGTVVFSTQAVSTSREKERAGSMAISAAQATTTTYLEKLNHAVRPQKKE
GLPDQRANVSKLPTPRPSVRDRHMSLPVAKPQKDLDPLSTFMMLRAQQRTYISVLPQNHT
STPVAQVEQQTPQPPTTEMRPGFDVKPVAYAVTGNDISDPEEIIQPVPEDRHNSKVIHVQ
ATESQFWAYRELQAFALPCLSRARELGLTNTACGDYSTLYPDHTRFLLKQQEKELSIRQG
QVKDLLFKCDLSTAVEYLSKATEACAGQSLDKLVRKLEIILYLSQKKQEANPKILELQEQ
LTTWVQSKSKGVQNSNVLVLITMDLDCARAMLIKALSQVTGDTVAALYPEESRSKLEGSK
VLDRRVSPKTLFIHTSFVYWNSY
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaactggctggccctgccaatgccctaccatctgggtagcagtgacctctacccccac
actggtaacccccctgaggtcacctacaggaaaccatggagcagagggaatgtgatttcc
aactgcaaactgtttgtcagtggatctgtactagatgacttgggcattaaaggacaacca
acatactctcttgagaagttgagtgttagtctgacccagatgagagtggatcttctggag
gtgataccgagctccaaccctaactcgcagcttgacttagatagagatgaagcagcgtgg
gtcctgcgagaggctaggaaggacaagggacactttgtctgtaatgaatcctttagcaag
agcacaggagagaaaatgagcccaagacatcagcgtgatgatcttgtcatgccagaggaa
gttctgtttgttgatcacttgccacagttcaggaaacatctgccctccatgaaagccaag
ttgtccagactgaggaatctgcctgtgtcagatcctcttctcagctccactggaggcacc
ctgtcagaggaagctatattcaggcactgtgtggcctatgaggtaccccttgatgcagag
acggaaagctccgaaacctgttcaaacactgacgaggactttagcaaagagtcgttgttg
aatgaagagtctctgatgttacctgttgaaatggacacctgcacacccaagagggaagat
tgcctccctttttcaaatattcctaaactattgaatgttgtacctgaattgatagaggag
cgaacctcttgcctggatatgctcactaaagcaactcccccagatgcactggagtcagta
gacatatcccagtttgaagtgccaaggctgccactcaatgactctcactgtgagattaat
gaaatgctgctggatctcaagtcatcagatcacttggtgttgcctactcagatggagatg
gacctacccctcaccccctctcccaagcccaacctgacccagctctgtctggcctcctcc
caactcccagctgagcagatctctccactctatagatattattttgtgtctgagaaagat
caggaggagatggaagaggcactttggagggcagagaagcaccttgacttggtagtgggc
tttcttttggcagagcctcagaagtcagaatccgttgtgcagctccagcctttgaccgaa
gtcttattagggattggtcgggacaactctgtgagactcgatgaaggaatggaactatca
cttctgggaacaaactcaccagaactgatagggatgtatgggaatggttcctctgacttc
actgagagtatgatgatctcagaccaaccccaccttatggaggcattgagcagtatgata
gaggacttcacactactatcaccctgccagatggacaatatattgagggaatctgtagat
gactctgagttgtcaggcccaccaagtgagatcaaatgcaggtctatcctgaagaatgca
acgcccatggttgtgccgtatcatcaggagagagagggagctgggaacacagtcgtttca
gcaccagctgttgccacttcccaggagagagagaggaccgggaatgtggccctcacagcc
caagcatctacttcttcccaagagaaagagagatctgggactgtggtcttttcaacgcag
gctgtttcaacttctcgtgagaaagagagagctgggagtatggccatctcagcagcacag
gctaccaccactacttacctggagaagttaaaccatgccgttagacctcagaagaaggag
ggtttacctgaccagagagctaatgtatccaaactcccaacccccagacccagtgtgaga
gaccgtcacatgagtctcccagtggctaaacctcagaaggacttagaccctctgtccact
ttcatgatgttaagggcccaacagagaacctacatctcggtgttgcctcagaaccataca
agcaccccagtggcacaggtggagcagcagacaccacaaccacctacgacagaaatgagg
cctggcttcgatgtaaagcctgttgcctatgcagtcacaggaaatgacatcagcgaccct
gaggaaatcattcagcctgtccctgaggacagacataacagcaaagtcatacacgtccaa
gccacagagagtcagttctgggcgtacagagagctgcaggcgtttgctctgccctgcctg
tccagagccagggagttgggactgaccaacacagcctgtggagactacagcaccctgtac
ccggaccacacacgtttcctactgaaacagcaggagaaggagctcagcattcgacagggc
caggtgaaggacctgctcttcaagtgtgaccttagcactgcagtggagtacctatccaag
gccacagaggcctgcgcggggcagagtctggacaagctggtgagaaagctggagattatt
ctatatctcagtcagaaaaaacaagaggccaaccctaagatactggaactgcaggaacag
ctgaccacatgggtgcagagcaagagcaaaggggtccaaaactccaatgttctggtgcta
ataacaatggacttggactgtgccagagctatgctcattaaagccctgagccaagtcaca
ggtgatactgtagctgcactgtatcctgaggagagtcgaagtaagctggagggttcgaaa
gttctagataggcgagtatctcccaaaactctatttatacatacttcttttgtttattgg
aactcctattga
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