Oncorhynchus tshawytscha (Chinook salmon): 112264132
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Entry
112264132 CDS
T05605
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112264132 (tmc1)
03037 Cilium and associated proteins [BR:
otw03037
]
112264132 (tmc1)
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112264132 (tmc1)
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112264132 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Piezo_TM1-24
Toddler
Motif
Other DBs
NCBI-GeneID:
112264132
NCBI-ProteinID:
XP_024296484
LinkDB
All DBs
Position
LG12:39105866..39118525
Genome browser
AA seq
939 aa
AA seq
DB search
MFQISIGLEDADEEDTVIDSDGRQERAKEKERKKERDRKRRRNVARRASSARKQGNELED
RPGREERRGRKKRDKEGKGKGGEDERQEEVKNDTVAKTQKNFSNENTRKLEQKEVEVVGE
EDGDTEEKRKNGRSEKGGKKEDNGRGETVEKKQKKKRVETSEEHESSEEEEDEEEKVGEE
KPEVLSPEELEKLKEEVDERKKLISTLRGKPWPMRKKLLTLRESHEFVEKYEGALGKGKS
RKLYAYKVMMLKKWMKFQRDFENFKTACVPWEMKIKEIESHFGSSVASYFIFLRWMYGIN
MILFGLTFGLVMVPEALMGRPYGSMPRKTVPRADEANAMDFAVLWDFGGYAQYSVLFYGY
YNSQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANEDGGGDNNSFNFSWKMFT
SWDYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFLRVLANFLVLCCLAGS
GYLIYFVVRRSQKFALEGLESHSWWERNEVNMVMSLLGMFCPMLFDVISALENYHPRIAL
QWQLGRIFALFLGNLYTFIIALMDEINLKREEEEVLKLNMTIWEASLYNGTLGANSTAPP
ITVHPADIPRGPCWETMVGQEFVRLIVSDTMTTYITLLIGDFLRAVLVRFLNYCWCWDLE
AGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCNVP
QERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKSRMFDVIQETLE
SDFPAWFGKVFSYASNPGLVLPFLLLMVLAIYYLQSTSKSYKQANLELKKKLQTQNEENK
KKTKMAALKAAMDLEEAQKARSEAPRQQRKNNASQQSYTEDREKKGGEHRAHQGKSDHQI
PPSATSPPAPRGHRIPGPLPGNQWQPAPSVQRVPNSQRH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagatcagcattggcttggaggatgcagatgaagaggacacagttattgactct
gatgggaggcaggagagggcaaaagagaaggagagaaagaaagagagggacagaaagaga
agaagaaatgtagcaagaagagcttccagtgcaagaaaacaaggaaatgaattggaggac
agaccaggaagagaggagaggagaggacgaaaaaagagggataaggagggaaaagggaaa
gggggagaggatgagaggcaggaagaagtgaagaatgacacagttgctaaaactcaaaag
aatttcagcaatgaaaacaccagaaaactggagcaaaaagaggtagaggttgtaggagag
gaggatggggataccgaggagaagaggaaaaatggacgctcagaaaaaggcgggaaaaag
gaggacaatggaagaggagagacagttgagaagaaacaaaagaaaaaaagggttgagaca
agtgaggagcatgagtcatcagaggaagaggaggatgaggaagagaaagtgggagaggag
aaaccagaggtcttgtctcccgaggagttggagaagctgaaggaggaagtggatgagagg
aagaaacttatctcgaccctaagaggaaagccttggcccatgaggaagaaactgctaact
ctacgggagtcccatgagtttgtggagaaatatgagggagctcttgggaaaggaaagagc
agaaaactgtatgcatataaagtcatgatgttgaagaaatggatgaagtttcagagggac
tttgaaaacttcaaaacggcttgcgttccatgggagatgaaaatcaaagagattgagagc
cattttggctcctcggttgcctcctacttcatattcctgaggtggatgtatggcatcaac
atgatcctctttgggctgacgtttggtctggtcatggtgccagaggctctgatgggcagg
ccgtatggtagcatgcccagaaagactgtccctagagctgacgaagccaacgccatggac
tttgctgtcctatgggactttgggggctacgcccagtattctgtcctcttttatggctac
tacaacagccagcgcgccattggctggctcaagttccgcatgcccctctcctacttcctg
gttggcgtgggaactgtggcctatagctatatggtggtgataaggactatggcccggaat
gctaatgaggacgggggcggagacaacaacagcttcaatttcagctggaagatgttcacc
agctgggattacctcatcggcaaccctgagacagccgacaacaagtttgcctccatcacc
accagctttaaggaggccattctggaggaacaggagagcaggaaggatgacaacatccac
ttgactcgttttctgcgggttctggccaacttcctggtgctgtgctgtctagcaggaagt
ggatatctcatctactttgtggtgcgtcgctcccagaagtttgctttagagggactggag
agccatagctggtgggagaggaatgaggtgaacatggtgatgtccctcctggggatgttc
tgtcccatgctgtttgatgtgatcagtgcactagagaactatcacccccgcattgctcta
cagtggcaactgggacgcatcttcgccctattcctggggaacctttacaccttcatcatc
gcactcatggatgagatcaacctcaaacgggaggaggaggaggtgctgaagcttaatatg
actatatgggaggccagtctgtataatgggaccctgggagcgaatagcacagctcctccc
atcaccgtccatcctgccgacatcccacgaggaccctgctgggaaaccatggtgggacag
gaatttgtccgactcattgtgtcggatactatgacaacctacatcacgctcctgatcggg
gacttcttgcgtgctgtgctggtgcgtttcctcaactactgctggtgttgggacttggag
gctggatttccctcctactcagagttcgatgtcagtgggaatgtcctgggcctgatcttc
aaccaaggcatgatatggatgggtgcgttctatgccccctgcctgcctgctctgaacgtg
ctgagactgcatgtgtcaatgtacctgcagtgctgggccgtcatgtgctgtaatgttcct
caggagagggtgttcaaggcctcaggctccaacaacttctacatggctatgctactggtc
atccttttcctctcaacgctgcccgccatctacaccatagtcactatccccccctccttc
gactgtggccccttcagtgggaagagccgcatgtttgatgtgatccaggagacgctggaa
tctgatttccctgcctggtttgggaaggtgttcagctacgcctccaaccctggcctggtg
ctgcctttcctactgctgatggttttggccatttattacttgcagtctacatccaaaagc
tacaagcaagccaacctggagttaaagaagaaacttcaaacccaaaatgaagagaacaag
aagaagactaaaatggcagcactgaaagctgccatggatttagaggaggctcaaaaagct
cggtcagaagcaccgcggcaacagagaaaaaacaacgcctctcagcaatcttatacggaa
gatagagaaaagaagggtggggaacacagagcacatcaaggaaagagcgaccatcaaatt
cccccttctgccaccagccccccggccccgaggggccacagaatccctgggcccctacca
ggtaaccagtggcaaccagcacccagtgttcagagggtcccaaactcccagagacactga
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