Oncorhynchus tshawytscha (Chinook salmon): 112264169
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Entry
112264169 CDS
T05605
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264169
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112264169
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112264169
NCBI-ProteinID:
XP_042186687
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Position
LG12:complement(54181981..54219138)
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AA seq
574 aa
AA seq
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MIRRKSSHFFERVVQKSDRRSKREKKEKPNLNGRQEGVVIDSWEDADYSIYRVTDRFGFL
HDKELPTPSAHEEKKNNLEIERVEKWLKMVKKWDKYRNSDRMVKRVYKGIPLQLRGQAWA
LMLDVEKVKNENEGKYERMKEQARIFSQEIKQIDLDVNRTFRNHIMFMDRFGVKQQSLFH
VLSAYSVYNTEVSYCQGMSQVAALLLMYMNEEDAFWALSQLLTNQKHAMHGFFIPGFPKL
QRFQAHHDQILSKLIPKLKKHLDREQMSCGIYSTKWFLQCFIDRTPFTLTLRLWDIYILE
GETILTAMSYTILRIFKKRLLKMNLEDLREFLQDKIGLSFLYSDDVIIDQLQASMAELRK
MKLDLPPPAKPEELPRKVLGLELPVLLTPLKPPRGVTSDPGTKRPGAGPLGLHIITHQPD
VISQDNSPSKEARKDKEALNREEEEDEEVPLPSPDPILIHTIQAQVTPDGPPQAGAGPPP
YEPPGSNEHNVMGQPAIFMPLHKEISVKSSSGPVALPETQAVVQQGTNTPPQIPMEEPTL
TPPVAPSSLSPPQPPCRVPRTQSAPLAQASQRPM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgatacggaggaagagttcgcacttctttgagcgtgtcgttcaaaagagtgaccgtcgc
tctaagagggagaagaaagagaagccgaatttgaatggcagacaggagggggtggtgatt
gactcctgggaggatgcagactacagtatttacagagtcaccgaccgtttcggatttctg
catgacaaggagctgccaacccctagtgcacatgaggagaagaaaaataacctggaaatt
gaaagggtggagaaatggctgaagatggtgaagaaatgggataaatacaggaacagtgac
aggatggtaaagcgtgtgtataagggtatcccactgcagctgagaggccaggcctgggcc
ctgatgctggatgtggagaaggtgaagaatgagaacgaggggaagtatgagaggatgaag
gaacaagccagaatcttctcccaggaaatcaaacagatagatctggacgtgaacaggaca
tttagaaaccacatcatgttcatggatcgattcggagtcaagcagcagtctttatttcat
gtcctgtctgcctattcggtctacaatacggaggtgagctactgccagggcatgagccag
gttgccgccttgctgctgatgtacatgaacgaggaagacgccttctgggccctgtcacag
ctactgaccaatcagaagcatgccatgcacggtttctttattcctgggtttcccaaactg
cagcgcttccaggcgcaccacgatcaaattctctccaaactcatccccaaactgaagaaa
catctggacagggaacagatgtcctgtgggatctacagcactaaatggttcctgcagtgt
ttcattgacaggaccccgttcaccctgactctacgtctgtgggacatctatattctggaa
ggagagacaatccttaccgccatgtcctacacaatccttcgaatatttaagaagcgtctc
ctaaagatgaatctggaggacctgagagagttccttcaggacaagatcggcctgtcgttc
ctctacagcgatgacgtcatcatcgatcagttgcaagcctccatggcggaactacggaag
atgaagctggaccttccacccccagccaagccagaggaactgccacggaaggtcctgggt
ttggagctacctgttctgctcacccctctcaagccccccaggggagtcacctctgacccg
ggtaccaaacgaccaggagcagggcctctgggtctccacatcatcacccaccagccagat
gtcatctcccaagacaacagcccctctaaggaggcaagaaaggacaaggaagctctaaat
agggaggaagaggaagatgaggaagtccctcttccatctccagaccccattctcatccac
accatccaagctcaagtgacccccgatgggcctccccaggctggggctgggccaccacct
tatgagccaccagggagcaatgagcacaatgttatgggacagcctgccatttttatgcca
ctccacaaagaaataagtgttaagagctcatctggtccagtggctttaccagagacacag
gccgtagttcaacagggtacaaacacacctccacaaatccccatggaggagccgaccctg
actcccccagttgccccttcatcccttagccctccacagccaccctgcagggtccctcgg
actcagtcagcacccttagcccaggcttcccagcggcctatgtga
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