Oncorhynchus tshawytscha (Chinook salmon): 112264173
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Entry
112264173 CDS
T05605
Name
(RefSeq) PHD finger protein 21A isoform X1
KO
K24651
PHD finger protein 21A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112264173
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
112264173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
C1_2
zf-HC5HC2H
AT_hook
Baculo_PEP_C
DUF2197
PHD_2
ADDz_Dnmt3b
S6OS1
C1_1
Endotoxin_N
STAT_alpha
Motif
Other DBs
NCBI-GeneID:
112264173
NCBI-ProteinID:
XP_042186759
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All DBs
Position
LG12:56723614..56773612
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AA seq
763 aa
AA seq
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MQNWMVFKTEDCVKAESCPGLSFRQKGSMMELQTLQEALKAEIQVHQKLVSQMKQDPQNA
DLKKQLHERQATITALSEKQKKVVEQLRKELLVKQDHPEVQAHQQPQHPVQPDGKASALP
NLHTPPSLPSPDKLSTPQNTMTVTPVIATKTLPLVLKAATATMPASAVTPRPSVAKVTSI
SNTPKASIGHPDSLSAPINLQTSSKLTHQGMEPVRIVPKNTIVVQATAQPIKVPQFVPPP
RLTPRPTFLTQVRPKPATPTPTSMVPIAPAPPPPMLAAPQLLQRPVMLTTKLTSTSLAST
TGPIHQVRVVNGQPCASITKTLPSAQLTGIVITSPATITATLATHQTLQIRSLSPDTKAV
KARGVTDPKTSASAPSSPSHTARSTAPPLLRNKREDNPQKLAFMVSLGLVTYDHLEEIQS
RRQERKRRTTANPVYSGAVFEPERKKNGVTYLNTPLHQGTRKRGRPPKYSSVPELGLHTP
TSPTSSHSASPANHRPERGGSHFPVHPHTLPLPRPSSGDGDIHEDFCTVCRRSGQLLMCD
TCARVYHLDCLAPPLKTIPRGMWICPKCHDQILMKDEAIPWPGTLAIVHSYIAYKAAKEE
EKQKLVKWSLELKQDREQLEQRVKQLSQSITKCMENKNTILARQRDMHNSLEKVKGLVHL
IQGINFCPSTEASPPALQTSLTNGGADCASADHTDDTSPEEHKNMTNNSGDDLNNNADGA
TEEEGKKEDVKEMDNLNSSSLGKTFEPPQTIAPALVDVAEGAK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattggatggtgttcaaaacggaagactgtgtgaaggctgaaagctgtcccgga
ctgagcttccgacagaaaggatcaatgatggaattacagaccctccaagaggccctgaaa
gcggaaatacaggttcatcagaaactagtgtcccagatgaagcaggatccacagaatgct
gatttgaagaagcagctccatgaacgtcaagcaacgatcacagcactgagtgagaagcag
aagaaggtggtggagcagctgagaaaagagctgctggtgaaacaggatcatccggaggtc
caggcccatcagcagccccagcacccagtgcagcctgatgggaaggcctctgcccttcct
aacctccacaccccaccctccctgccctcgcctgacaaactgagcacaccacagaacacg
atgacggtcaccccggtcattgccactaagactctacctctggtactgaaagctgccacc
gctacaatgcctgcttccgccgtgacgccgcgaccctccgtcgccaaggtcacctccatc
agcaacacgcccaaggccagcataggtcaccctgactcactgagtgcacctatcaacctt
cagacatccagcaagttgacccatcaggggatggagccggttcggatagtccccaagaac
actattgttgtgcaggccactgcccagcctatcaaagttcctcagtttgtccctccgcct
agactgacgcctcgacctacctttctaacgcaggtccgacctaaaccagccacgcctacg
cccacttccatggtacccatcgcccctgcgccccctcctcccatgctggctgctcctcag
ctcctccagcggcctgtcatgttgaccaccaagctgacctccacctcactggcctccacc
accgggcccatccaccaggtacgcgttgtaaacggccagccctgcgccagcatcaccaag
accctgccctctgcccagctgactggcatcgtcatcacctcgccggccaccattactgcc
accctggcaactcatcagacccttcagatcagaagcctcagccctgacaccaaggctgtt
aaagctcggggtgttacagacccgaagacttcggccagtgcgccctcctccccttcacac
accgctagaagcaccgctccacccctgctgaggaacaagagagaggacaacccccagaaa
cttgccttcatggtatccttgggacttgtgacatatgaccatctggaagagatccagagt
cggaggcaggagcgcaagaggagaacaacagcaaacccagtatacagtggagcagtgttt
gagcctgagcgtaagaagaatggtgtcacctacctgaacactcctctacaccaaggcacc
aggaagagaggtcgcccacccaaatacagcagtgttcctgagctgggtcttcacacccca
acatcccccaccagcagtcattccgcctccccggccaaccaccggccagagagggggggc
tctcacttccccgtccacccccacaccctccctctgcctagacccagctctggggatgga
gacatccatgaggacttctgcactgtgtgcaggcgcagtggtcagttgctcatgtgtgac
acatgtgcacgtgtttaccatctggactgcctcgctccacccttgaaaaccattcccagg
ggcatgtggatctgccccaaatgtcacgaccagattttgatgaaagatgaggcaatccca
tggcctggaaccctcgctattgttcattcctacattgcatataaagcagctaaagaggag
gagaagcagaaactggtgaagtggagcttggaactcaagcaggacagagaacagctagaa
caaagggtcaaacagctgagccaatccataacgaaatgtatggagaacaagaacactatc
ctggcccgtcagagggacatgcacaactccctggagaaggtcaagggcctggtgcatctc
attcagggcatcaacttctgcccatccactgaagcctcaccaccagcgctccagaccagc
ctgacaaatggaggagcagactgtgccagtgctgaccacacggacgacacaagtcccgag
gagcacaagaacatgactaacaatagcggcgacgacctgaacaacaacgcggacggggcg
accgaggaggaagggaagaaagaggacgttaaagagatggacaacctcaacagcagcagc
cttggcaaaacctttgagcctccccagactatagcaccggcccttgtggatgtagcagag
ggggccaaataa
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