Oncorhynchus tshawytscha (Chinook salmon): 112264185
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Entry
112264185 CDS
T05605
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112264185
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
112264185
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
112264185
NCBI-ProteinID:
XP_042176118
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All DBs
Position
LG04:61550098..61622664
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AA seq
1254 aa
AA seq
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MFVHHPALRCPALRSLPCPALPCPALRSCPALRRCPALRCPALRSLPCPALAALRSLPCP
ALAALPCPVLLELTILLLIVGDPINIPMWFYWDLTMLLLMVGNLIVIPVGITFFKDEHTP
PWIIFNVISDTFFLMDLVLNFRTGIVKEDNTEIILDPQQIKIKYLRSWFVVDFISSIPVD
YIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS
AMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPQDCWVSKNKMVNDTWGQQYSYALFKAM
SHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQ
VEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGELNEPLREEIINFNCRKLVASM
PLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLS
DGSYFGEVGQRWHSISPTRQQDLYLDHSEHVILPCRRSSLPVSCAEICLLTRGRRTASVR
ADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSLLQHKVQHDLSSGVL
NYQENEIIQQIVQHDRDMATCAHLLQNIPPPQPPSPGHTPVIWAPLIQAPLQAAAATTSV
AIALTHHPHLPHLPAALFRPPVTVLGSRNLQDPPPGRLKKFHTSAPTSFMGPDSPSSTPS
KLHCSGMDTALLASFRAHHTTQGSGAASSSQQASSSSGTQPGPSGASAFPFGPFSSSGGS
PSHSTAQLHSQPQTQQPFRCTTPPLAALFQQGAVGGAGMGGATGGATGGATGWSSGGATE
GEVGGAIGGADERATGGTIRRATGWGRRGSIEGYTTGGHIGGATGGYSGGDSGGHIRGTS
GGHIGATGGAMGGAARGHIGGAMGGAIGGMTIGVLGTSSSGCSISPQSIGSSGNINPCQL
LHSQLPPKPPQVGSLQQFAGGGRTPSAFYHSPPPGSPSSSSTQQAPEGSPSPLAQFSLAG
LQSGLQSGLQSGLQSGLVPQLSLERSALASLAQYGSANGSPCYTPLGPSPTVQSPVTGRT
FHYSDSSSATGSHSSLLMPQTSLPSQQHAAGSESLLGLGSFSEDMNLLSCSNPSLPQDVA
QAMGYSSLPRSSPSRSSPPRSSPPRSSPPRSSTPRSSMEPGYCLSSPYSSPILVPKPCSS
VSGHMAPPVPAQMSPGQLQHQTQSPVASPALPPRKGSAAHSELEPVRSKLTSNL
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtccaccaccctgccctgcgctgccctgccctgcgctcactgccctgccctgcg
ctgccctgccctgccctgcgctcctgccctgccctgcgccgctgccctgccctgcgctgc
cctgccctgcgctcgctgccctgccctgcgctcgctgccctgcgctcgctgccctgccct
gcgctcgctgccctgccctgccctgtgctgctggagttgactatactgctactgatagtg
ggggacccgatcaacatccctatgtggttctactgggacctgaccatgctgctgctgatg
gtggggaacctaatcgtcatcccggtgggcatcaccttcttcaaagacgaacacacgccc
ccctggatcatcttcaacgtgatctcagacaccttcttcctcatggacctggtgctcaac
ttccgcaccggcatcgtcaaggaggacaacaccgagatcatcctggacccacaacagatc
aagatcaagtacctgaggagctggttcgtggtggacttcatctcctctatacctgtggac
tacatcttcctcatcgtggagacacgcatcgactcagacttctacaagacggcccgggcg
ctgaggatcgtccgcttcaccaagatcctcagcctgctcagactgctcaggctgtccagg
ctcatcagatacatccaccagtgggaggagatcttccatatgacctatgacctggccagt
gccatggtgcgtatcgtcaacctgattggtatgatgctgctgctatgccactgggacgga
tgtctgcagttcctggttcccatgctgcaggacttcccccaggactgctgggtgtccaaa
aacaaaatggtgaacgacacatggggacagcagtactcctacgccctgttcaaagccatg
agccacatgctgtgtatcgggtacggcatgtacccgcctgtgggcatgacggacgtgtgg
ctcaccatcctcagcatgatcgtgggcgccacctgctatgccatgttcgtgggtcacgcc
accgcactcatccagtctctggactcctcccgtcggcagtaccaggagaagtacaaacag
gtggagcagtacatgtccttccacaagctgccggctgatatgaggcagaggatccatgac
tactacgagcatcgctaccaaggcaagatgtttgatgaggagagcatcctgggagaactc
aacgagccactcagagaggaaatcattaactttaactgtcgaaagctggtggcttccatg
ccactgtttgccaacgcggaccccaactttgtgacttccatgctgaccaagctgcgcttc
gaggtgttccagcccggagactacatcatcagagagggcaccatcggcaagaagatgtac
ttcatccagcatggagtggtcagcgttctcaccaagggcaacaaggaaaccaagctctca
gacggatcctactttggggaagtgggccaacgttggcatagcatcagccctacacgacaa
caggatctctaccttgaccatagtgaacacgtcatcctgccgtgtcgacgttcctctctt
cctgtgtcctgtgcagagatctgtctgttgacgcggggtagaagaacagccagcgtcaga
gcagacacctactgccgtctgtactctctgtctgtggacaacttcaacgaggtcctggaa
gagtaccccatgatgagacgggccttcgagaccgtggctctggaccggctggaccgcata
gggaagaagaactccctcctgcagcacaaggtgcagcacgacctaagctccggcgttctc
aactaccaggagaacgagatcatccagcagattgtgcagcatgacagagacatggccacc
tgtgcccacctcctccagaacattcctccacctcagcccccgtctccggggcacaccccc
gtcatctgggctcccctcatccaggcacccctgcaggctgctgccgccaccacctctgtg
gccatcgccttgacgcaccacccccacctcccacacctccccgccgcgctcttccgccca
ccggtcacggtcctgggctccaggaacctccaggaccctccccccggccggctgaagaag
ttccacacgtcggcgcccacctccttcatgggacctgactccccctccagcaccccatct
aaactgcactgctctgggatggacacagccctgctggcctccttccgggcccaccacacg
actcaggggtcaggggcagccagctccagtcagcaggcgtccagcagcagtggaacccag
cctgggcctagtggggcctccgcctttccctttgggcctttctcctcctccgggggctct
ccttcccacagcacggcccagctccattcacagccccagacgcagcagccattccgctgc
accaccccgcctctcgctgccctcttccagcagggagctgtggggggagcagggatgggt
ggagcaacagggggagctactgggggggctacaggttggtcttcaggaggcgctactgaa
ggtgaagtaggaggagcaataggaggggctgatgagagggccacaggtgggacaataaga
agggccactggttggggtagacgtggatctatagaaggatataccactggagggcatata
ggaggagccactggggggtactcaggaggggatagtggtgggcacattagaggaactagt
ggaggccatataggagctactggtggagcaatgggaggggcagctagagggcatatagga
ggggcaatgggaggggctataggtggaatgacaattggagttctgggtacctctagttct
ggttgtagtatcagcccccagtccattggttcatccggcaacattaacccctgtcagctg
ctccacagccagctgccccccaagcctccacaggtgggctccctgcagcagtttgcaggc
gggggcaggactcctagtgcattctaccactccccccctccaggctccccatcctcctcc
tccacccagcaggccccagagggttccccatctcccctggcccagttcagcctggcaggc
ttacagtctggacttcagtctggcctccagtctggcctccagtctggcctggtccctcag
ctgtccctggagaggtctgccctggcctcgttggcccagtacggctcagctaacggctcg
ccctgctacacccccctggggcctagccccacggtccaaagcccagtcacaggaaggact
ttccactacagcgactcctccagtgccactgggtcccacagctctctgctcatgccccag
acctccctccccagccagcagcacgcagccggcagtgagtctctgctggggctgggcagc
ttctctgaggatatgaacctattgtcctgttctaacccctccctgccccaggatgtggcc
caggccatgggatactcctcactcccacgttcctcaccctctcgcagctcgcccccacgc
tcctcaccccctcgcagctcgcctccacgctcctcaaccccacgctcctccatggagcca
ggatactgtctctcctcgccctactcctcccccatcctagtgcccaaaccctgtagctcg
gtgtcaggacacatggctcctcctgtccctgcccagatgtctccaggacaactgcagcac
cagactcagtcccccgtggcctccccggccctgccgccacggaaaggctcggcagcccac
tctgaactagaacctgtccgctccaaactaacctccaatttgtga
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