Oncorhynchus tshawytscha (Chinook salmon): 112264219
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Entry
112264219 CDS
T05605
Name
(RefSeq) 12S rRNA N4-methylcytidine methyltransferase
KO
K25876
12S rRNA N4-methylcytidine (m4C) methyltransferase [EC:2.1.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112264219
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112264219
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
Methyltransf_12
Methyltr_RsmB-F
FtsJ
Met_10
Motif
Other DBs
NCBI-GeneID:
112264219
NCBI-ProteinID:
XP_042186907
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All DBs
Position
LG12:complement(68341075..68395612)
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AA seq
374 aa
AA seq
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MLLVESASHGRGVGCLTPALLPWSLVTRTDVKITPPSWLNRHCTHLSCLEVLQCLDIQPG
QVVLDMTFGGGGHTKAILRASPEVTVVGLDRDPTAFSLAQQLAKEHSGRVHPLLGRFSEL
GALLSRLRLQSGSVDAVLLDAGCSSMQMDCPERGFSLSKDGPLDMRMDADRYPDMPCAAD
VVNALDQQALASILTAYGEERHARKIASAMVEARSVYPITRTQQLASVVAGSFAASALYA
RKDRLQRPSHVATKTFQALRMFVNDELNELHAGLCTAQTVLKPGGRLCVLTFHSLEDRLV
KRFLHGEDVGAPPRRSVRQRVQRWEEEEEEEEKGGEKDSGHWVDLQRGVLMPQAEDVLEN
PRGRSAKLRAAFKQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttgtagagtcagccagccatggaaggggagtaggttgtcttactccggctttg
ctcccatggagcctggtcaccaggacagacgtaaagataactccaccatcttggctgaac
agacactgcacacacctgtcatgcttagaagtgctccaatgtttagatattcaacctggc
caggttgttctggacatgacttttggaggtggaggtcacaccaaagccatcctgagggca
tctcctgaggtgacagttgtgggcctagaccgagaccccacagcattcagcttagctcaa
cagctggccaaggaacacagtggccgggtgcacccgttactggggcgtttcagtgagctg
ggagccctgctgtctagactgaggttgcagtcaggtagtgtggatgctgttcttctggat
gctggctgctcctccatgcagatggactgtcccgagagaggcttctccctcagtaaggat
ggccctctggacatgaggatggatgcagacaggtaccccgacatgccctgcgctgctgac
gttgtgaacgccttagatcaacaggcgcttgcgtccatcctcactgcctatggggaggag
aggcatgccaggaaaatagcctcggccatggtggaggcacgcagtgtctaccccatcacc
cggacacagcagctggccagcgtggttgcaggatcttttgctgccagcgctctctatgcc
cgcaaagatcggcttcagcgaccctcacacgttgccaccaagacgtttcaggcgctgcgt
atgtttgtcaatgatgagctgaatgaactgcatgctggactctgcactgctcagacagtg
cttaaacctggcggccgcctctgtgtgctgaccttccattcactagaggatcgcttggta
aagcgttttctccatggagaagatgtaggtgccccaccccgtcggagtgtccgtcagaga
gttcagcgatgggaggaagaggaggaggaagaagagaagggtggggaaaaggacagtggt
cactgggttgacctgcagagaggggtgctgatgccacaggcagaagacgtactggagaat
ccacggggacgctcagccaaactcagggcagcattcaaacaataa
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