Oncorhynchus tshawytscha (Chinook salmon): 112264229
Help
Entry
112264229 CDS
T05605
Name
(RefSeq) DENN domain-containing protein 5A-like isoform X1
KO
K20164
DENN domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264229
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112264229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
RUN
uDENN
dDENN
PLAT
ACT_5
Motif
Other DBs
NCBI-GeneID:
112264229
NCBI-ProteinID:
XP_042175018
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MTTGFSSNSCRFADYFVICGLDTESGLEPDELSALCQYIEATKFRDGARGLASADEGENF
EQSPLRRTFKSKVLAHYPENVEWSPFDQDAVGMLCMPKGLAFRTQADTREPQFHSFIITR
EDGSRTYGFALTFYEEVTSKQICSAMQTLYHMHNAEQYDILHTPTTPRCPEDQRHLHPHP
LNPHPQHMLLPTPSISRLQRFNSYDISRDTLYVSKCICLIAPMAFPQACRKVLQQLHQAV
SSPQPPPLPLESYVYNILYEVPLPPAGRSLKFSGVYGPVVCQRPSTAELPLFDFPISQVF
ELLGVENVLQLFTCALLEIQILLYSQHYQRLMTVAESITALMFPFQWQHVYVPILPASLL
HFLDAPVPYLMGLHSNGEGDRTKLELPQEANLCFVDIDNHFIELPEDLPLFPNKLEFIQE
ISEVLLAFGVSPEGNPLHSQGQAKHWGFRSTDMVTDRRNGNLASSPLNSYLLRENETIAR
LQALVKRTGVSLEKLDVREDASSNKDLKVQCDEEELKMHQLNIQVREVFANRFTQMFADY
EVFVIQPNQDKESWFSNRDQMQNFDKASFLSDQPEPYLPFLSRFLETQMFASFIDSKILC
HDDEDKEHTLRVFDSRVDKIRMLNVRTPTLRTSMYQTCTNIDEAEKAIEMRVVKIDHTAL
HPHLLDMKIGQGRYEHGFFPRLQSDVLSTGPVSNKWAKRSAPAQWRRKDRQKQHAEHLYL
DNDQREKYIQEARNLGTTIRQPKLSNLSPSVIAQTNWKFVEGLLKECRNKTKRMLVEKMG
REAVELGHGEVSITGVEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLLHYQESKEKT
DAAPAGLGPPGLIHNTERRKSDAGAALAPLKVSLIRDMRHIQNIGEIKTDVGKARAWVRL
SMEKKLLSRHLKKLLSDHELTKKLYKRYAFLRCDDEKEQFLYHLLSFNAVDYFCFTNVFT
TIMIPYHVLVIPSKKLGGSMFTANPWVCVSGELAETGVLQIPKHTQEITFECQNLGKLTT
VQMGHDNSGLYAKWLVEYVMVRNEITGHAYKFPCGRWLGKGVDDGSLERVLVGELVTPNS
ENEDRMCRTPPMQQSPGMMRRFVTISPNSKPKLNTGQIQEGVGEAINGIVKHFHKPEKER
GSLTLLLCGEYGLVWALEQVFQHGFKSPRLFKNVFIWDFLEKSQVYFESAEQREVTPDEN
WQTRVRHFCRFMRAINSTSRNIGKDGKFQMLVCLGARDHLLHHWIALLADCPITVQMYED
TALIKDRSLVNSLIRVLQTLQEFNITLEASLVKGIGI
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggcttcagctcgaattcatgtcgattcgcagattattttgttatctgcgga
cttgacactgaaagcgggcttgaaccagacgaactgtcagctttatgccagtatatagag
gctactaaattcagagatggggccagaggattggcgagtgcagatgaaggtgagaatttt
gagcagagtccactgcggagaacctttaaatccaaagttctagcgcactacccagagaat
gtggagtggagtccctttgaccaggatgccgttggcatgctgtgtatgccaaagggtctg
gccttccgcacgcaggcggacacacgtgagcctcagttccactccttcatcatcacgcgg
gaggacggctcgcggacgtacggctttgccctcactttctatgaggaggtgaccagcaag
cagatctgcagcgccatgcagaccctgtaccacatgcacaatgccgaacaatacgacatc
ctgcacacccccaccaccccgcggtgccctgaggaccagcgccacctccatccccaccct
ctcaacccccacccccaacacatgctcctccccacgccctctatctcccggctacagcgc
ttcaactcctacgacatcagccgcgacacgctctacgtgtccaagtgcatctgcctcatc
gcgcccatggccttcccccaggcctgcaggaaggtgctccagcagctccaccaggccgtc
tcctccccccagcccccacccctccccttggagagctacgtctacaacatcctgtacgag
gtgcccctgcctcccgccgggcgctccctgaagttctcgggggtgtatgggccagtggtg
tgccagaggcccagcacggcagagctgcctctctttgacttccctatcagccaggtgttt
gagctgctgggggtggagaacgtcctccagctgtttacctgtgccctgttggagatccag
atcctgctctactcacagcattaccagaggctgatgactgtggccgagagcatcacagcc
ttaatgttccctttccagtggcagcatgtctatgtgcccatcctgcccgcctcactgctg
cacttcctggatgccccagtgccctacctgatgggcctgcactccaacggagagggtgac
cgcaccaaactcgagctgcctcaggaggccaacttgtgtttcgtggacatcgacaaccac
ttcattgagctgccagaggacctccctctgttccccaacaagctagagttcatccaggag
atctccgaggtgctgttggccttcggtgtgtctccagaggggaacccgctccacagccag
ggccaggccaaacactggggcttccgctccaccgacatggtcacggacagacgcaacggc
aacctggccagctcgcccctcaactcctacctgctgagggagaacgagaccatcgctaga
ctgcaggccctggtcaagaggactggggtcagcctggagaagttggatgtgagggaggat
gccagcagcaacaaggacctgaaggtacagtgtgatgaggaggagctgaagatgcaccag
ctcaacatccaggtgcgagaggtcttcgccaaccgcttcacccagatgttcgccgactac
gaggtgtttgtcatccagcccaaccaggacaaggagtcctggttcagcaacagggaccaa
atgcagaactttgacaaggcctccttcctctctgaccagcctgagccctacctgcccttc
ctgtcccgtttcctggagactcagatgttcgcctccttcatcgatagtaagatcctttgc
catgatgatgaggacaaggaacacacgttgagggtgtttgactcccgcgtggacaaaatc
cgcatgctgaacgtgcgcacgcccaccctgcgcacctccatgtaccagacctgcaccaat
atcgacgaggcggagaaggccatagagatgcgggtggttaagatcgaccacacggccctg
catccccacctgctggatatgaagattggccagggtcgctacgaacacggcttcttcccc
cggctgcagtctgacgtgctctccactggacccgtcagcaacaaatgggcgaagaggagt
gctccagcacagtggaggaggaaggacagacagaaacaacacgctgaacacctttacctg
gacaacgaccagagagagaaatacatccaggaggccaggaacctgggcactaccatccgg
cagcccaagctgtccaacctctccccctccgtcatcgctcagaccaactggaagtttgtg
gagggtctgctgaaggagtgcaggaataagaccaagcgcatgctggttgagaagatgggc
agggaggcggtggagctgggtcatggggaggtcagcattacaggcgtggaggagaacaca
cttatcgcctccctctgtgacctgctggagaggatctggagccacgggctgcaggtcaaa
cagggtaaatctgccttgtggtcccacctgctccattatcaggagagcaaagagaagacg
gatgcagcaccagccggtttgggtcccccaggactcatccacaacacagagagacgcaaa
tctgacgccggcgctgccttggcccctctcaaggtatccctgatcagggacatgagacac
atccagaacattggtgagatcaagacagacgtgggcaaggccagggcctgggtgaggctc
tccatggagaagaaactgctgtccaggcacctcaaaaagctgctgtctgaccatgaactt
acaaagaaactatacaagcgttatgcttttctgcgctgtgacgatgagaaagagcagttc
ctgtaccacctcctctccttcaacgctgtggactacttctgtttcaccaatgtcttcaca
accatcatgatcccataccatgtgctggtgattcccagtaagaaactaggaggctccatg
ttcacagccaacccctgggtgtgtgtgtctggggagctggctgagactggggttctccag
atccccaagcacactcaggagatcacctttgagtgccagaacctgggcaagctgaccaca
gtgcagatgggccatgataactcaggtctttacgccaagtggcttgtggagtatgttatg
gtccggaatgagatcacaggtcatgcttacaagttcccgtgtggccggtggctggggaag
ggggtggacgatggcagtctggagagggtcctggtgggagagctagtgacaccaaactca
gagaacgaggacagaatgtgtcgcacgccccccatgcagcagtcccctggaatgatgaga
aggttcgtcaccatctcaccaaacagcaaaccaaagttgaacactggtcagatccaagag
ggagtgggagaggccatcaatgggatagtgaagcacttccacaagccagagaaggagagg
ggcagtctgacccttctgttgtgtggggagtatggtctagtctgggctttagagcaggtg
ttccagcatggcttcaaatccccacgcctctttaagaatgtcttcatctgggacttctta
gaaaagtcacaagtgtactttgagagtgctgagcagagggaggtgactccagatgagaac
tggcaaaccagagtacgccacttctgccgcttcatgcgggccatcaacagcacatctagg
aacataggcaaggatgggaagttccagatgctggtgtgtctgggtgccagggaccatttg
ttacaccactggatcgctctcctcgcagactgtccaatcacagtgcaaatgtacgaagac
acagcactgataaaggaccgctcattggtaaattctctgatcagagtgctacagactttg
caggagttcaacattaccctagaagcttcacttgtcaaagggatcggtatctag
DBGET
integrated database retrieval system
