Oncorhynchus tshawytscha (Chinook salmon): 112264239
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Entry
112264239 CDS
T05605
Name
(RefSeq) iroquois-class homeodomain protein IRX-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112264239
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112264239
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
112264239
NCBI-ProteinID:
XP_042186976
UniProt:
A0A8C8FLD7
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Position
LG12:73049077..73052778
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AA seq
451 aa
AA seq
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MAYPQGYLYQPSPSLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSAEAGAAATFASYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPSKPKDKGDSTDTESDHKLLKPGDIVCDRFKEENHGKET
DPLLSDSELKDQGDRTELLPESAKPTTSSPSAMPRGGTELVAQDKPSEMGHAPGTVNSNV
TSVIHSSPSAPKPKLWSLAEIATSSDRCKSSSDGPQGHGMGHSTVITTNAASPSRSSPQC
PLPNSTVLSRPIYYTSPFYPGYTNYGSFGHLHSHSNHGSGTGSTAHFNGLNQTVLNRAEA
LVRESQKGRGQTQVDLCKDSPYELKKGMSNI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctatttgtaccagccatccccttctttggcgctgtattcatgc
ccggcgtacagcaccagcgttatatcgggacccaggaccgaagaacttggtagatcctca
tctggctctgcttttgctccctatgccggatctaccgcgttcaccagcgcttcgcccggg
tacaactcccatctcccgtacagtgcggaggcaggagcggccgcgacattcgcttcatac
gtgagttctccctatgaccacacgacgggcatggctgggtctataggatatcacccctac
gctgctcccctgggttcatacccctacggtgacccggcataccgaaaaaacgcgacccgg
gatgctaccgccactctcaaagcctggttgaacgagcaccgtaagaacccctaccccacc
aagggcgagaaaatcatgctggcaatcatcaccaaaatgaccctcacccaagtttccacc
tggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggactccccga
aaccggagcgaggacgaggaggaagacgagaacatcgatctggaaaagaatgacgacgac
gagcctagcaagccgaaagacaagggagactcgacagacacagagtcagatcataaattg
ctgaagccgggggacatagtgtgcgacagatttaaagaggagaatcatggcaaagaaacg
gatccccttctgagcgactcggaattaaaagaccaaggggatcggacagagttactgccc
gagtctgctaaacccaccacctcgtctccatccgccatgcctcggggaggaacggagctc
gttgcgcaagacaagccgtcagaaatgggccatgcgccgggcacggtaaacagcaacgtg
acgtctgtcattcactcctccccatcggcccctaaacccaaactctggtccctggctgag
atcgcaacgtcctcagacaggtgtaagagcagcagcgacgggccgcagggccatgggatg
ggtcacagcacagtgatcaccaccaatgcagcgtcaccatcacggtcctccccacagtgc
cctctcccaaacagcacagtcctatccaggcctatctactacacgtcccctttttacccg
ggctacacgaactatggcagctttggacatcttcacagtcacagtaatcacggctcaggc
acgggctccacggcacatttcaatggattaaaccagactgtgttaaatagagcagaagct
ttggtaagagaaagccagaaaggcagaggccaaacgcaggtagatctttgtaaagactcc
ccttatgaactaaagaaaggtatgtcaaacatttaa
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