Oncorhynchus tshawytscha (Chinook salmon): 112264251
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Entry
112264251 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 12
KO
K08622
a disintegrin and metalloproteinase with thrombospondin motifs 7 [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112264251
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
112264251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
ADAMTS_CR_2
TSP1_CCN
Reprolysin_5
ADAMTS_CR_3
TSP1_spondin
Reprolysin_3
Reprolysin_2
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
112264251
NCBI-ProteinID:
XP_042171213
LinkDB
All DBs
Position
Unknown
AA seq
1882 aa
AA seq
DB search
MFNNSKTFGFEQETESFLQGLPQYEVVHPYRVDAKGHFLSNFVSHRVSRVQRREAQGEPG
NPTRVFYQLQHGGHNLHFNLTLNPHLLAPGFLTERRYGGMEGAKIRSHGPSLCHFIGDVW
DQATMKGRAAISTCDGLTGLFKLSQEEFFIRPLERSSDELTAPQVHIIYKRHTSPTQSQL
VQPISGDHTTNGTCGVKDPAAALERVERQRERWERRQRRKRRIRQRSISREKWVETLVVA
DSKMVEYHGTKGVESYVLAVMNIVSGLFHDASIGNPINIVVVRLILLEKEEEDLKITHHA
DNSLSSFCKWQKRLNVKGEEHAVHHDVAVLLTRKDICTAINKPCETLGLSHVAGMCQPHR
SCSISEDTGLPLAFTVTHELGHNFGIQHDGNGNDCEPIGKRPFIMSPQLLYGTSTPSWSR
CSRQYITRFLDRGWGWCLDDPPMRDVLDLNSVPPGVLYSAAHQCRLQYGSGSLLCDDVDN
VCSTLWCTVGTTCHSKLDGAVDGTRCGEDKWCFDGECVAVGHQPESVKGGWAPWSEWSAC
SRTCGAGVQNAQRDCVNPVPKYGGKYCVGERRRYKICNSTRCPPNQPSFRLIQCSHFNTM
LYKGKFYKWVQVNNRVNPCELHCRPLNEYFSEKMLDAVIDGTQCYEGSLSRDMCVNGICK
NVGCDYEIDSNAVEDRCGVCHGNGSTCETVKKTFEESEGLGYVDIGLIPEGAREIRIEEV
AEAGNFLALRSDDPGKYFLNGGWTIQWNGEYKAAGTVFTYERTGQLENLTSPGPTLEPVW
IQLLFQETNPGVRYEYTIHRETLLDSDNDVPIPGFFWKYGSWTECSATCGTGVQRQIVHC
VERTSGIVEEGYCDPTTRPDDKRASCNEELCPAIWWVGEWQKCSATCGEKGLAKRTVLCI
QAVGLEENRALQPSECHHIPRPESAAPCNAHVPCPADWSTGNWSECSLTCGGGVRSRKVV
CSRNTGVDCDPRKNPSSLTPCYLQDCPQIIDVFGGSNDWSGSGSSSKEINEINSIPDSNP
LPKHSTTRAQPRAPNNLNNIIPHPNHIDKTTDNSAKNNVPVDDFYYDYNFIKFHEDISYD
FGLGNNGKDLVDDLGPDPQQEPKPSSSAEEHVYRETTTDPPTTTSPISTTFETTPFIREV
EEPQDPNLDNAEIDGRLQTEKPNEVEREEDLLLSEDYFLPVSTTPSAPVLETRFSQSWKE
TNSNFGWPHYLSTAASPVPTSMGTTENTHGPQSEKNDDENTDIYVHFDVKDSNVGTTIEC
TTTAPVSHDYEDATVPTTMVEEVKEVGVLDYNSHQETAIGLPSPGYQDEKESPLPPLDPP
SPGPVFEFETYEDSFFTTTLSQWEATTSLPYEPPAPDSTGDYNGFFPGEPDFDQQDFEIE
PKADSEVNLGVTDSDFTVTSRPVPQEPHLPPSPPPPLSHSLSGNQENIKHSTSTTGSDSP
PPTHLEGDPQSPPPSMLAETEPATAQLETDISAQSSTTGPTPSKGANAGPPFPSPYGWSE
IDYNEILIPPMLRSRGMDPSLTYQPPVDVTTTTPQDGTKPMPPTQSPEPAVPPPSPLSQP
CTPLIPLSQPCPPPSPLSQPCSLCQPILPPHSGGHQSQPQCQAQLPLQTPQLPWRAGNWS
ACSTSCGLGAIWRLVVCSTGLESDCDLTKRPVPARRCYLRPCSSWRIGNWTKCSKNCGGG
VTLREIQCFDTRDQRPLRPFHCQTVSTRPVARMPCLPQPCLDWYSSSWGQCSEVCGGGEQ
QRLVTCPEEDRCDEAHLPSNIQACNSQPCTQWVTGSWGQCSASCGGGVQRRLVKCVNTKT
EPEEEEDHAHCDSEPWPENSQKCNLNECDSGPAGLTCLRDRLTFRFCQTLQWLGRCHLPA
VQTQCCKTCGRRSRGNERTSRR
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaacagtaaaacgtttggatttgaacaagagacggagagctttctacagggg
cttccgcagtacgaggtcgttcacccctaccgagtggacgccaaaggtcacttcctgtcc
aactttgtgtctcaccgcgtcagccgggtacagcggagggaagcccagggggaaccagga
aaccctacacgggtgttctaccagttgcagcacggtggccacaatctgcacttcaacctc
accctcaacccacacctgctggctcctggcttcctgactgagcgaaggtacggtggcatg
gagggggccaaaatacgcagccatggcccttcgctgtgccactttatcggggacgtgtgg
gaccaggcaaccatgaaggggagggcggctataagcacttgtgacggcctgactgggctg
ttcaagctgtcccaggaggagttctttatccggccattggagcggtctagtgatgagttg
acggcaccacaagtccacattatctacaagcgccacacctcccccacccaaagccagttg
gtacagcccatctctggagaccataccaccaacggtacctgtggggtaaaagatcctgct
gcagcgttggaacgtgtggagaggcaacgggagcgctgggagagacgccagcggaggaag
aggaggatacgccagcgttccatcagcagggagaagtgggtggaaacgctggtggtggcc
gattccaagatggtggagtaccacggcaccaagggcgtggagagctacgtactggctgtc
atgaacatcgtgtcggggttgtttcatgatgccagcattggaaaccctatcaacatcgta
gtggttcgtctgatcctgctggagaaggaagaggaagacctgaagatcacccaccacgct
gacaacagcctgagcagcttctgtaagtggcagaaacggcttaacgtgaagggagaagaa
cacgcggtccatcacgacgtggccgtccttctcaccagaaaggacatctgtacggccatc
aataagccctgtgagaccctgggcctgtctcatgtggcaggaatgtgtcagccccaccgc
agctgcagcatcagtgaggacacgggcctgccgctggccttcaccgtcacccacgagctc
gggcacaactttgggattcagcatgatgggaacggcaatgactgtgagccgattgggaaa
agacctttcatcatgtctccacagctcctgtatggcacctccacccccagctggtcgcgc
tgcagccgccagtatatcacccgcttcctcgatcgaggctggggctggtgcctggatgac
ccccccatgcgggacgtgctggatctgaactctgttccccccggggtcctgtacagtgct
gcccaccagtgccgcctacagtacggctctggatccctgctctgtgacgacgtggacaac
gtctgcagtacgttgtggtgcactgtggggacaacttgtcactcaaagctggatggtgca
gtcgacgggaccaggtgtggtgaggacaagtggtgctttgacggggagtgtgtggcggtg
ggacaccagcctgagagcgtcaaagggggctgggctccatggagcgagtggtctgcctgt
tccagaacctgtggggccggagttcagaacgcccagagggactgcgtcaacccagttccc
aagtacggagggaagtactgcgtgggggagcgaaggcgctacaagatctgtaacagcacc
cgctgcccccccaaccagccctccttcagactcatccagtgcagtcactttaacaccatg
ctttacaagggcaagttctacaaatgggtgcaggtcaacaacagagtgaacccctgcgag
ctgcactgccgccctctgaacgagtacttctcagagaagatgctggacgcggtcattgat
gggacccagtgctatgagggcagcttgagccgagacatgtgtgttaacggcatctgcaag
aatgtggggtgtgactatgagattgactccaacgcggtggaggatcgctgtggggtttgc
catggcaacgggtctacttgtgagactgtgaagaagacctttgaggagagcgaagggctt
gggtatgtggacattgggctgattccagagggggctcgggaaattcgtatcgaggaggtg
gctgaggctgggaatttcttggctctccggagtgacgaccccggaaagtacttcctgaat
ggcggttggactatccaatggaatggggaatacaaggcagcggggacggtgttcacctat
gagaggacaggacaactggagaacttgacctcccctggaccaaccctagagccagtgtgg
atacagctactcttccaggagacaaacccaggggtgcgctatgagtacaccatccataga
gagacacttctggactcagacaatgacgtccctatccccggtttcttctggaagtatggc
tcatggactgagtgcagtgccacctgcgggacaggtgtccagcgacagattgttcactgt
gtggagaggacctctgggatagtagaagagggctactgtgacccgacgacccgtcctgac
gataaacgagccagctgcaatgaggagctttgcccagccatatggtgggtgggcgagtgg
cagaagtgctcggccacgtgcggtgagaagggcttggccaagaggacggtgctgtgcatc
caggccgtgggtctggaggagaacagagccctgcagccctctgaatgtcaccacataccc
aggcctgagtcagcggcgccttgtaacgctcatgtcccctgccccgcggactggtccaca
ggcaactggtctgagtgctcgctgacgtgtggcggtggtgtgcggagccgaaaggttgtc
tgttccagaaacacaggggtggactgtgacccccgaaagaatcccagttctcttactcca
tgctacctccaggactgtcctcagatcatcgacgtcttcggtggcagcaacgactggtct
ggcagtggttcgtcaagcaaggaaatcaacgaaatcaactccatccctgactccaacccc
ctgcccaaacacagtacgactagagctcagccaagggcccctaacaatctgaataacatc
atcccccacccgaatcacattgacaagaccactgacaactcagccaaaaacaatgtaccg
gtggacgatttttactacgactacaacttcatcaaattccacgaggacatttcctacgac
tttggcttggggaacaacggtaaagacttggtggatgatcttggaccagatccacaacag
gagcctaaaccaagttctagtgcagaagaacatgtttacagagaaactacaacagatcct
cccacaactacctcacccatttctaccacttttgagacgactcctttcattagggaagtt
gaggaaccacaagaccctaacctggacaatgcagagattgatggaagactacagacggag
aaacccaatgaagtagagcgagaggaggatttactcctttcagaggactattttctacct
gtttccaccacaccctcagcaccagttttagagaccaggttttcacaaagctggaaagaa
acaaacagtaattttggttggcctcattacctcagcacagcagccagcccggtgcccact
agcatgggaaccactgagaacacacatgggccccagagtgaaaaaaatgatgatgaaaac
actgacatttatgtccattttgatgtgaaagacagcaatgttggtacaaccatcgaatgt
accaccactgcccctgtcagccatgactatgaagatgccaccgtacccacaacgatggta
gaagaggtgaaagaagtgggtgttttggactacaattcccaccaggagactgcaattgga
ctaccatcccctggctaccaagatgaaaaggagagcccgcttccacccctggatccacct
tccccaggacctgtgtttgagtttgaaacatacgaggacagctttttcaccacaaccctg
tcccaatgggaggcaaccacctctcttccatacgagccaccagccccagactctactgga
gattacaatggctttttccctggtgaaccagactttgatcagcaggactttgaaattgag
cccaaagctgatagcgaagtcaatttaggggtcaccgacagtgacttcaccgtgacctca
cgtcctgtgcctcaggagccacatcttccaccctctcctcccccacctctttcccattca
ctctcaggaaaccaggagaacatcaaacacagcacatcaacaactggaagtgactctcct
cctcctactcatctggaaggagaccctcagtctccacctccgtcaatgttagcagagaca
gagccagccacagcccagttagagacagacatttcagcacagtcctccacgactgggcca
actccatctaaaggggccaatgcgggccctccattcccctccccatatgggtggtcagag
attgactacaatgagatcctcatcccccccatgctgagatccaggggcatggacccttcc
ctcacataccaacccccagtggatgtcaccacaaccactccccaggatggcacgaaaccc
atgccccccacccagtcccctgagccagccgtgcccccacccagtcccctgagccagccg
tgcaccccactcattcccctgagccagccgtgccccccacccagtcctctgagccagcca
tgctcactctgccaacccattctcccaccacactctggtggacaccagagccaaccccag
tgccaagcccagcttccactccaaacgccacagcttccttggagagccggcaactggagc
gcatgttctactagctgtggtctgggggccatctggaggttggtggtctgcagcacggga
ctggagtctgactgtgacctgaccaagaggcctgtgccggcccggcgctgctacctccga
ccctgctcctcctggaggatagggaactggaccaagtgttccaagaactgtggtggtggg
gtgaccctgcgtgagatccagtgctttgacaccagggaccagaggcctttgcggcccttc
cactgtcagaccgtgtctacccggccggtggcccgcatgccctgcctaccccagccctgc
ctggactggtactcttcttcctggggacagtgctctgaggtgtgtgggggaggggagcag
cagcgtctggttacctgtccagaagaggatcgctgtgacgaggcccatctgcccagcaac
atccaggcctgtaacagccaaccctgtacccaatgggtcactggctcctggggacagtgc
tctgcatcctgtggtggcggcgtgcagcggaggctggtgaaatgtgtgaacaccaagacg
gagcctgaggaggaggaggatcatgcccactgtgactctgagccctggccagaaaacagc
cagaagtgtaacctgaatgagtgtgacagcggccccgctgggctcacgtgtcttcgtgac
cgcctcacgttccgtttctgtcagaccctccagtggcttggccgatgccacctgcccgcc
gtgcagacacagtgctgcaagacctgtggccggcgttcccgtggcaacgagcgcacgtcc
cgtcgctga
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