Oncorhynchus tshawytscha (Chinook salmon): 112264314
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Entry
112264314 CDS
T05605
Name
(RefSeq) syntaxin-12 isoform X2
KO
K13813
syntaxin 12/13
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112264314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264314
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112264314
Membrane trafficking [BR:
otw04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
112264314
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112264314
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
Syntaxin
SNARE
Vfa1
2OG-FeII_Oxy_6
AGK_C
SAS4
HsbA
Motif
Other DBs
NCBI-GeneID:
112264314
NCBI-ProteinID:
XP_024296601
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All DBs
Position
LG13:8939923..8950715
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AA seq
238 aa
AA seq
DB search
MSSGKADRYLTQPRDSNTLIQACSSNIQKITQNTAKIKSMVNQLGTGQDTSELRDSLQQI
QHFTNQLAKETNKHLKDLGFVSPSSAPSEQRQQKIQKDRLMNDFSATLDNFQAVQRQAAQ
KEKESVARAGSRLSAEDGVSEEQLVSFDNQDDWAPIITQTTEEDLALIKERETNIRQLES
DILDVNQIFKDLAVMIHDQGEMIDCIEANVESAEVHVDRGTEQLQRAAYFQEDCLVPN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggtaaagcagaccgctatctcacccagccacgagactccaataccctcatc
caggcatgcagctccaacatccagaagatcacacagaacactgccaagataaagagcatg
gtgaatcagctggggacgggacaagacaccagcgaactgagggacagtctgcagcagata
cagcactttacaaaccagctggccaaggagaccaacaagcacctgaaagacctgggcttc
gtctcaccatcttcagcaccttccgagcagaggcaacagaagatccagaaggaccgactg
atgaatgatttctccgctaccctcgacaacttccaggccgtacagcgccaggcagcacag
aaggagaaggagtctgtggctcgagctggttcccgtctctcagctgaagatggtgtctct
gaggaacagcttgtgtcttttgataaccaagatgattgggctccgataatcacacagaca
acagaggaggacttggcacttatcaaggagagagagactaacatcagacagctagagtcg
gacatcttggatgtgaaccagatcttcaaggacctggccgtgatgatccatgatcaggga
gagatgattgactgcatagaggccaacgtggagagtgccgaggtccacgtagaccgaggg
acagaacagcttcagagagccgcctacttccaggaggattgtctcgtgccgaactga
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