Oncorhynchus tshawytscha (Chinook salmon): 112264317
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Entry
112264317 CDS
T05605
Name
(RefSeq) serine/arginine-rich splicing factor 4
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112264317
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112264317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112264317
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112264317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112264317
NCBI-ProteinID:
XP_024296605
LinkDB
All DBs
Position
LG13:complement(9333828..9347926)
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AA seq
422 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVIVEHTKGPRRDGSYGSGGGGGGGGGGGGGGGGGGGGGGRSGGGYGRGGRDRYGPP
ARTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTNKGRRNEGVIEFRLYSDMKRALEK
LDGTEVNGRKIRLIEDRPGAKRSKRSYSRSRSRSRSRSRRSRKSRSRSDSSSRSRSRGAA
SRSRSRSHSKKDKDKTKGRREEERTNGAHKAKDVGRSKSRSKSRSKSRSKSRSKSRSKSR
SKSRSKSKKSSKKEGKKSRKDESRSRSRSRSRSAAKDRSRKSGSKSREPAKSDNEAAAAE
KGAPRSRSHTPTESKPKSKSKSKSPSPSLAKARSRSPSVSRSESRSKSRSASRSRSRSRS
QS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagtttacatcggaagattgagctatcgagcaagggaaaaggacgtggagaag
ttcttcaaaggctatgggaagatacttgaagttgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccccgcgatgcagatgatgctgtgtatgacctgaatgggaaagacctg
tgtggggagagggttattgtggaacacacaaaggggccgcggcgggacggcagctacggc
tcaggaggaggaggaggaggcggcggcggaggaggaggaggagggggaggaggaggagga
ggtggtggaagaagcgggggcgggtatgggcgtggtggcagagacagatatggcccccca
gcaaggacagactatcggctgatcgtcgagaacctgtctagtcgctgcagctggcaggac
ctgaaggactacatgaggcaggcgggtgaggtgacgtatgctgacaccaataaaggacgc
aggaacgagggagtgatagagttcaggctgtactctgacatgaagagagccctggagaag
ctggacggcacagaggtgaacggcaggaagatccggctgattgaggaccgccccggggcc
aagcgcagcaagcgctcttactctcgcagccgctccaggtctcgctccaggagccgcagg
tcccgtaagagccgcagccgcagtgacagcagcagtcgctcccgctccaggggtgctgcc
tcccgctcacgtagtcgctcccacagcaagaaggacaaggacaagaccaagggccgcaga
gaggaggagcgcaccaacggtgcacacaaggccaaggatgtgggccgcagtaagagccgc
agtaagagccgcagtaagagccgcagtaagagccgcagtaagagccgcagtaagagccgc
agtaagagccgcagtaagagcaaaaagagcagcaagaaagaagggaagaagagcaggaag
gatgagtccaggtctcgttcccgctctcgctctagatcagcagccaaggatcgctccagg
aagtcaggctccaagagccgtgagccggccaagagcgacaacgaggcagctgcagccgag
aagggggctccccgctctcgctcccatacgcccactgaatccaaacctaaatccaagtca
aagtccaaatctccatctccctccctggccaaagcccgctcccgttccccctcagtctcc
cgctcagagtctcgctccaaatctcgctccgcatctcgttctcgctcccgttctcgttca
cagtcctga
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