Oncorhynchus tshawytscha (Chinook salmon): 112264386
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Entry
112264386 CDS
T05605
Name
(RefSeq) ubiquilin-4 isoform X1
KO
K04523
ubiquilin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112264386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264386
03051 Proteasome [BR:
otw03051
]
112264386
Membrane trafficking [BR:
otw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112264386
Proteasome [BR:
otw03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112264386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
YukD
CUE
HOIP-UBA
Dsc3_N
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
112264386
NCBI-ProteinID:
XP_024296728
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Position
LG13:16843704..16855588
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AA seq
626 aa
AA seq
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MADNGGADPVNNNNDTTVGLEGTIIKVTVKTPKDKEEIAISEDASVTQFKEEISRRFKAK
QDQLVLIFAGKILKDGDSLNQHGIKDGLTVHLVIKTAHKAGDGASSSSSVTTQVGSSSGN
SSGPSSAAHPSTVGSTGGPASAPPQTPNILTGFGGLSSLSSMGMGSANFMELQQQMQSQL
MSNPEMLSQIMENPLVQNMMSNPDLMRQMIVANPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARDQFGNNPFSAL
GGNSDGGVQPSRTENREPLPNPWGSTNPSEGGGSTGTTGSSATGSTTPNVSNPLGVNSAS
LGNGMFSSPGMQSLMQQISENPQLMQNMLSAPYMRSIMQSLAQNPDMASQVLMNNPLLAG
NPQLQEQFRSQLPVFLQQMQNPEALSVMTNPRAMQALLQIQQGLQTLQTEAPGLMPSLAP
GGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLPGGLVGGLPGGIPTTPLSTGG
GVAPENPASSPSAGENPAQQLMMQQMLQMFAGGNSSSQTPEVQFQQQLEQLGAMGFINRE
ANLQALIATGGDVNAAIERLLGSQPS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggcggcgcagatcctgttaataacaacaatgatacaactgttggtttg
gagggaactattatcaaggtcacagtcaaaaccccaaaagacaaggaggaaatcgccatc
tcggaagatgcgtctgtcactcagtttaaagaggagatctcacggaggttcaaagccaag
caggatcagttggttctgatctttgcagggaagatactgaaagacggggactctctcaac
cagcacggcatcaaggatggcctgacagtccacctggtcataaagacagcacacaaggca
ggagatggcgctagttcctcttcctctgtcaccacccaggtgggcagcagtagtggcaac
tcctctggccccagttctgcagcccacccttctactgtagggtccactggaggccctgcc
tcggcacccccacagacacccaatatactgactgggttcggtggcttgtccagcctgagc
agcatgggcatgggctccgctaacttcatggagctgcagcagcagatgcagagccagctg
atgtccaacccagagatgctgtcccagatcatggagaaccccctggtgcagaacatgatg
tccaacccagacctgatgaggcagatgatcgtggccaacccccagatgcagcagctgatg
gagcgcaaccccgagatctcccacatgctcaacaacccagagcttatgagacaaaccatg
gagctggccaggaaccctgccatgatgcaggaaatgatgcgtaaccaggaccgggcgctt
agcaacctggagagcatccccggaggctacaatgccctgcgcaggatgtacacagacatc
caggagcccatgttcagcgctgcacgagaccagtttggaaacaaccctttctcagccctg
gggggcaactctgatgggggggtgcagccatcgaggacagagaaccgggagcccctgccc
aacccctggggttcaactaacccctctgagggtggagggagcacgggcaccacaggctcc
tctgccactggcagcaccacccccaatgtgtccaaccctctgggcgtcaactctgccagt
ctgggtaacggcatgttcagcagtccgggcatgcagagtctgatgcagcagatctcggag
aacccccagctgatgcagaacatgctgtctgctccctacatgcgcagtatcatgcagtct
ctggcccagaacccagacatggcctcccaggtgttgatgaataaccctctgttggctgga
aacccccagctgcaggaacagttcaggagccagctgcccgtcttcctgcagcagatgcag
aacccagaggctctttctgtgatgaccaacccccgggccatgcaggctctcctccagata
caacagggcctacagacactgcagacagaggcaccgggactcatgccaagtttggcacca
ggtggactgccaggaggtctccctggaggtctccctggaggtctccctggaggtctccct
ggaggtctccctggaggtctccctggaggtctccctggaggtctccctggaggtctacca
gggggactagtgggcggattaccaggtggaatacccacaactcccctgtccacgggtggg
ggtgtggctccagagaaccctgcctcttcgccgagtgctggggaaaacccagcccagcaa
ctgatgatgcagcagatgctccaaatgttcgcaggagggaattcctcgagccagacccca
gaggtgcagttccagcagcagctggagcagctgggcgctatgggcttcatcaaccgagag
gccaacctgcaggccctgatcgctaccggaggagatgtcaacgctgccattgagagactg
ctgggctcacagccctcataa
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