Oncorhynchus tshawytscha (Chinook salmon): 112264393
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Entry
112264393 CDS
T05605
Symbol
tbc1d5
Name
(RefSeq) TBC1 domain family member 5
KO
K18469
TBC1 domain family member 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264393 (tbc1d5)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112264393 (tbc1d5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112264393
NCBI-ProteinID:
XP_024296742
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All DBs
Position
LG13:17153008..17181475
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AA seq
865 aa
AA seq
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MQHPNFETHHPLQPDGEQEPGFDPLHNFNKNHSRGGSLDSSRLSYSESESTFLSYRKEWD
DLFLNSNYLARIRQAGISGRLRSSRFRSVCWKLYLEVLPEDKSQWLNKTKELRSQYEKIK
ETHITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELRGMIKQDVMRTFPEMRYFQDE
AVRTKLTDILFCYARENELLLYKQGMHELLAPIVFVLHCDHQAFQHASETAYPSEEMLSL
LNPMFHEHDAYAMFSQLMETAEPWFSSLEREVRRGKDEMLTSMPFARPQDSGPSVAIVTK
VNRIQDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSI
TLDLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHTLLHKALFLRDPKNNPRP
ANYQFQQNLDYYKTRGADLVNNTRASGKMAPLNINKVSSSLLSFGRKLIAPALSVGGSSG
ISPINSEVLSAPSPVTVGPHPQAEPLLSGHASLQTQTPPHSQHHRLLKSESMPVHLSKVS
GGVSQVPVPAHIFSDTKGQISRTASSSPSIESLSGGRGHTTASPPLPVTRESDTSTSSPP
LSATRKDSFFNITRSRSHSKTMIGKKEAEEELEAQVSFLQGQINDLEAMSKYCAKMMNTH
IGKIQEVILQEHLEKEDEVLVSLAGLKQIKDILKGALRFNQSLLEAEENEEITIADDHYD
IASNAAAAIVEQLANCHHDKHPFQATPQRGDGDGEQKDREEEEHEHTESEQQASPPESSL
SVGSEGKNWDDYILVSQDGELQPTEGGAERTPPIRLLRGSLRVEPEGVGVFQDPLMGAAS
GSSSPDEGSTHSKDYDFTIVNPQDL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccctaacttcgagacccatcaccctctccagcctgatggagagcaggagcct
ggcttcgaccctctccacaacttcaacaagaaccacagccgtggaggatctctggatagt
agcaggttgtcttactcagagtctgagtccaccttcctttcctacaggaaagaatgggat
gacctgttcctgaacagtaattatctggccaggattcggcaggcaggcatcagcggccga
ttgcggagcagccgattccgcagtgtgtgctggaagttgtacctggaggtccttcctgaa
gataagagccaatggctcaacaagaccaaggagctgcgatcccagtatgagaagatcaaa
gagactcacatcaccaacccccgtaaagctgcaggccagcaggacctggtggtcaacaat
ccactctcacaagacgaggggagcctgtggaacaagttcttccaggacaaagagctgaga
gggatgatcaaacaggacgtgatgagaacctttcctgagatgcgttacttccaagacgag
gctgtcaggaccaagctgacagacatcttgttctgctatgcccgagagaacgaactgcta
ctgtacaaacagggaatgcatgagttgttggctcctatcgtgtttgtcctgcactgtgac
catcaggcctttcagcacgccagcgagaccgcgtaccccagtgaggagatgctttctcta
ctgaatcctatgttccatgagcatgatgcctatgccatgttctcccagctgatggagaca
gcagaaccctggttctccagcttggagagagaagtcagaagggggaaggacgagatgctg
accagcatgccgttcgcccgtccgcaggactcggggccgtctgttgccatagtgaccaaa
gtgaaccgcatccaggaccaactggtgaagaagcacgacgtggagctgcacatgcacgtc
aaccgcctggagatcgccccgcagatatacggcattcgctgggtgcgtctgctgtttggc
cgtgagttccccctgcaggacctgttggtggtgtgggatgccctgtttgctgacagcatc
actctagacctggtggactatgtcttcgtagccatgctgctctacatcagagatgccttg
atagcgagtaacttccagacctgtcttggccttctaatgcactacccacctataggagac
atccacaccctactacacaaggctctgttcctcagagatcccaagaacaatcctcggcca
gccaactaccagtttcaacagaatctggactattacaagaccagaggagcggacctggtc
aacaacacccgtgccagtggcaagatggctcctctcaacatcaacaaggtctccagcagt
ctgctcagcttcggtaggaagctcatcgcccctgctctgtcagtgggtggctccagcggc
atctctccaattaatagcgaggtcctgtctgccccctcccccgtcactgtgggtcctcac
ccccaggccgagcccttgttgtctggccatgcatccctgcagacgcagacacccccccat
tcccagcaccaccgcctactcaagtctgagagtatgcctgtccacctgagcaaagtttca
ggaggagtctctcaggttcctgtcccagcccacattttctctgacacaaaaggccaaatc
tccaggacagctagctcctcccccagcatagagagcctctctggagggcggggtcacacc
actgcatccccaccccttcctgtcaccagggaaagtgacaccagcacgtcgtctccgccc
ctctcggccaccaggaaggattccttcttcaacatcactcgctcccgctcccacagcaag
accatgattggcaagaaagaggctgaggaggagttggaggcccaggtgtccttcctgcag
ggtcagatcaacgacctggaggccatgagcaagtactgtgccaagatgatgaacacacat
attggtaagatccaggaggtgatcctacaggagcacctggagaaagaagatgaggtgttg
gtgtcactggctggactcaaacagatcaaggacatcctgaagggagcgctgcgtttcaac
cagagcctgctggaggctgaggagaacgaggagatcaccatcgctgacgaccactatgac
atcgcctccaatgccgctgcagccatcgtagaacagctcgccaactgtcaccatgacaaa
caccccttccaggccacaccgcagcgtggtgacggtgatggagaacagaaggacagagag
gaggaagagcatgagcacacggagtcagagcaacaggcgtctcccccagagtcatctctg
tctgtgggttcggaggggaagaactgggacgactacatcctggtctcgcaggacggagag
ctgcagcccaccgagggaggggccgagaggacccctccaatcagactgctccgtggctcg
ctcagggtggagccggagggcgtgggggtgttccaggaccccctaatgggtgcagcgtct
ggctcctccagcccagacgagggcagcactcacagcaaagactatgacttcaccatcgtc
aacccccaggacctgtga
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