Oncorhynchus tshawytscha (Chinook salmon): 112264399
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Entry
112264399 CDS
T05605
Symbol
igf2bp3
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112264399 (igf2bp3)
03041 Spliceosome [BR:
otw03041
]
112264399 (igf2bp3)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112264399 (igf2bp3)
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112264399 (igf2bp3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
RRM_1
KH_Vigilin
KH_DEAH11
Motif
Other DBs
NCBI-GeneID:
112264399
NCBI-ProteinID:
XP_024296750
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All DBs
Position
LG13:complement(17414262..17454083)
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AA seq
624 aa
AA seq
DB search
MNKLYIGNVSEEASAEDLETIFEQWKIPHSGPFLVKTGYAFVDCPDEKIAMKAIDILSGK
VDLHGKLLEVEHSVPKRQRSCKLQIRNIPPHMQWEVLDGMLAQYGTVENCEQVNTDTDTA
VVNVRYGAKDQARQAMEKLNGFLMENFALKVSYIPDEMATADAPPLGGGRRGFVPRGPPR
SGSPGMGARPKLQSEVPLRILVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAA
EKPITVHSTPEGCSNACRTIMEIMQKEALDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK
KIEVDTETKITISPLQDLTLYNPERTITVKGSIEACSRAEEEVMKKVRESYENDVAAMNL
QSNLIPGLNLNALGLFPGGAPGMGPSMGHNVPPPGAQGGYSFGSSSFGGEGPFWASVLSG
SSQPVSGQGQPESETVHLFIPALAVGAIIGKQGQHIKQLSRYAGASIKISADEVSVVDAN
QVAPPEGMDTKQRMVIIAGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFAA
GRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDQVIVKITGHFYASQLAQRKIQEILSQ
VRRQQQPKPSPRGEGPPLPRPSRK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctgtacattggaaacgtgagtgaagaggcgagtgcggaggacttggaaact
atatttgagcagtggaagattccgcacagtggtccgtttctcgtcaaaactggttatgcg
ttcgtggattgccccgatgaaaagattgcaatgaaggccatcgacattctttcaggtaaa
gttgacctacatggaaaactcctagaggtggagcactctgtccctaaacgtcaaaggagc
tgtaagctgcagatcaggaacatcccgcctcatatgcagtgggaggttctggatggcatg
ttggcccaatatggcacagtggagaactgtgagcaagtaaatacagacacagacactgca
gtggtcaacgtcagatatggtgctaaggaccaggctagacaggcgatggagaagctgaat
ggcttcctgatggagaactttgccctgaaggtgtcgtacatcccagacgagatggccacc
gctgacgccccacctctgggagggggtaggaggggctttgtcccccgtggccctccccgc
tcaggttctccgggcatgggggcgcgccccaaactacagtcagaagttcccttacgtata
ctcgtcccaacgcagtttgtaggagccatcatcggcaaggagggagccaccattcgcaac
atcaccaaacagacacactcaaagatcgacatccacaggaaggagaatgcgggagcggca
gagaaacccatcacagtccactccaccccggagggctgctccaacgcctgcagaaccatc
atggagatcatgcaaaaggaggccctcgacaccaagtttactgaggagattccactgaag
attctggctcacaacaactttgtgggccgactgatcgggaaggaaggacgtaacttaaaa
aaaattgaagtggacacagagaccaagatcaccatctcccctctccaggacctgaccctg
tacaaccctgagaggaccatcacagtgaagggttctatcgaggcctgctcccgtgccgag
gaggaagtcatgaagaaggtcagggagtcgtatgagaacgacgtggccgctatgaatctc
cagtctaacctgattccaggactcaacctgaatgctttgggtttgttccctggtggtgct
ccaggtatgggcccctccatgggacacaacgtcccacctcccggtgcccagggtggctat
tcattcgggagcagctcctttgggggtgaagggccattttgggcgtctgtgctgtcgggg
agcagccagcccgtctctggccaggggcagccggagtcggagacggtccatctgttcatc
ccggcgctggcggtcggagcgatcatcggaaaacagggtcaacacatcaagcagctgtcg
cgctacgccggagcctccatcaagatcagtgcagatgaagtcagtgtcgtagatgcaaac
caggtagcccctccagaaggtatggacaccaagcagaggatggtgatcattgctggacca
ccagaggcccagttcaaggctcagggtcgtatctttgggaagctaaaggaggagaacttc
tttgggccgaaggaggaggtgaagctagaggctcacatcaaggtgccctctttcgctgct
ggacgtgtcatcggcaagggaggcaaaacggtgaatgagttgcagaacttgaccagtgct
gaggtggtggtccccagagaccagacgcctgacgagaacgaccaggtcattgtcaaaatc
actggacacttctatgcaagccagctggcccagaggaagatccaggagatcttgtcccag
gtgagacggcaacagcagcccaaaccctcaccccgcggggagggaccacccctcccccgc
ccttcccggaagtag
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