Oncorhynchus tshawytscha (Chinook salmon): 112264444
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Entry
112264444 CDS
T05605
Name
(RefSeq) polycomb complex protein BMI-1-like
KO
K11459
polycomb group RING finger protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112264444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112264444
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
112264444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
Rad60-SLD
zf-Nse
TRAF3_RING
PHD_2
DZR
Motif
Other DBs
NCBI-GeneID:
112264444
NCBI-ProteinID:
XP_024296827
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All DBs
Position
LG02:65106447..65112340
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AA seq
333 aa
AA seq
DB search
MDKMQPSRLKITELNPNLICPLCVGYFIDATTIVECLHSFCKTCIVAFLETNKFCPRCDV
QVHKTCPQLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYTNQENQHLEPGEVVEEPTII
AEDEIISLSIQFHEKNKSDTQPMNTEGDNTNSKRFLQCPAAMTVLHLAKFLRSKMDIPNT
LRIEVLYADEPLKDYYTLMDIAYMYSWRRNGPLPLQYWVKPTRKRRRLSQGAAQAHSDGV
NTSPTSESDSHSDKALSPAGQAPRASTLPSPALRGQPSTLQSPSGTTGPNGTQRLPLASK
SGSNARKVNVNGKSNGAATETRGGDKGAVPPPT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatgcaacccagtcggctaaaaatcacagagctgaatcctaacctgatatgc
ccactgtgtgtgggctacttcattgatgccacaaccatcgtggagtgcttgcactcattc
tgcaagacgtgcattgttgccttcctggaaaccaacaagttctgccccagatgtgatgtg
caagtacacaagacatgtccacagctcagcatcaggtcagacaagactctacaggacatt
gtatacaagctggtgcctggattattcaaagatgagatgaaacgaaggcgggacttctac
acaaaccaggaaaaccaacacctggagccaggagaagtggtggaggagccaactattatt
gcagaagatgaaatcatcagtctctccattcagttccatgagaagaacaaaagtgacaca
caacctatgaatacagaaggagacaataccaacagcaaacgcttcctgcaatgcccggca
gccatgaccgtcctgcacttagccaagttcctgcgtagcaagatggacattccaaacacc
ttacggattgaagtgctgtacgctgatgagcccttaaaggactactacacactgatggat
attgcctacatgtattcttggcgacgtaatggccccctccccctgcagtactgggtcaag
cccacccggaagcgtcgacggctgtcccaaggtgccgcccaggctcactccgacggtgtc
aacacaagccccacctctgagagcgactcccacagcgacaaggccctgagcccggctggt
caggcccccagagcctccaccctgcccagccctgccctccgaggccaaccctctaccctt
cagagccccagcggtaccacaggacccaacggtactcaacggctccctctagcctccaag
tcagggagcaacgcccgcaaggtgaatgtcaacggcaaaagcaatggagcggcgactgag
actaggggaggggacaaaggggctgtaccaccaccaacctaa
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