Oncorhynchus tshawytscha (Chinook salmon): 112264458
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Entry
112264458 CDS
T05605
Name
(RefSeq) hyccin isoform X1
KO
K21844
protein FAM126
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264458
Membrane trafficking [BR:
otw04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
112264458
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Gene cluster
GFIT
Motif
Pfam:
Hyccin
Motif
Other DBs
NCBI-GeneID:
112264458
NCBI-ProteinID:
XP_024296836
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Position
LG13:21604541..21624903
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AA seq
515 aa
AA seq
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MLAMDQGVVEEWLSEFKTLPDSAVSSYAASLKEKGSLVPALYKVIRENYSDLLEPVCHQL
FEFYRSGEPRLQRFVLQFLPELLWSLLLAPSAARDPHTSGCIEALLLGIYNLEIVDKDGQ
SKVLSFTVPSLSKPSVYHEPSTIGSLALTEGALANHGLRRVVYSGPHLQRETFTAQNRFE
VLTFLLLCYNAALSYMTSSSLQSLCQLSSRVCICGYPRQQLRRYKGISSRLTVTSEFLVQ
LITGIHYALCNGEMDLGSKALDDVLYRAQLELYPEALLVGDITHKHTQVGNAIKSSQQCA
ALKSGASKEGARSIQVEITPTSSRISRNAVTSLSIRGHRWKRHDAVDLGSPDELMDISEV
DEGVWPTGGAGLDSLTPPTITISNSVTPGVGGAKTGSRKWHLGGRLHKEKEACPPGGQTL
GENLDLSIKRLTLTSSQSVPKGPSHSALSSLSRTASAVFSRSFEGNNTGGNRGNPEAGRY
SCSGSLQEEELGYLSPTPNHNQRSPSISVHFRSDL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttggctatggaccaaggagtggtggaggagtggctgtcagagtttaagacccttcct
gacagtgcagtgtccagctacgcagcgtctctgaaggagaaaggctccctggtcccagcg
ctctataaagtcatcagggagaactacagtgatttgttggagccagtgtgtcaccagttg
tttgagttctatcgtagcggagagccacggctgcagcggtttgttctccagttcctccct
gagctgctctggtccctcctcctggctccgtctgcagccagggacccacatacctccggc
tgtatagaggccctgctactggggatatataatctggagattgtagataaggatggacag
agtaaagtcctttctttcactgtcccctccctctccaaaccctcagtctaccacgagccc
tccaccattggctccctggcgttgacggaaggggctctagctaatcatgggctgcgtaga
gtggtgtacagcgggcctcacctacagagagaaaccttcacggctcagaacaggtttgag
gtgctgaccttcctgctgctgtgttacaatgcagctctcagctacatgacctcctcatct
ctgcagtccctctgccagctcagctccagggtgtgtatctgtggttacccgcggcaacag
ctaaggaggtataaaggcatcagctctcgtctgaccgtcacctctgagttcctggtccaa
ctcatcactgggatacattacgcactgtgtaatggggagatggacctgggttccaaggcg
ctggatgatgttctgtaccgagctcagctagaactgtaccctgaagctctactggtgggt
gacatcacacacaaacacacacaggtgggtaatgccatcaagtcgtcccaacagtgtgct
gcgctgaagtctggcgctagtaaagaaggagctcgcagcattcaggtggagatcactcct
acttcctctaggatttcacggaatgcggtcacgtcactctctatcagaggacaccgctgg
aaacgccatgacgcagtggatttgggttccccggatgagttgatggatatctctgaagtg
gacgaaggggtgtggcctacaggaggggctggcctggactcactgactccacctaccatc
actatcagcaacagcgttacccctggggtgggaggggccaagacaggaagcaggaagtgg
catctaggcggacggttgcataaggagaaggaggcttgtcctccaggggggcagaccctg
ggcgagaacctggatctgtcaatcaaacgtctgacgttgacgtccagccaatcggtcccc
aaggggccgagccatagcgcactgagcagcctatcgcgtacagccagcgctgtgttctca
cgctcctttgagggaaacaacaccggaggaaaccgtggcaaccccgaggctggccgctat
tcgtgcagtggcagcctgcaggaggaggagttaggctatctaagccccacccccaaccac
aaccagcgctcgcccagcatcagcgtgcactttaggagcgacctgtga
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