Oncorhynchus tshawytscha (Chinook salmon): 112264470
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Entry
112264470 CDS
T05605
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112264470
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112264470
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112264470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
Ank
Ank_4
Ank_5
UBA_ARI1
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
112264470
NCBI-ProteinID:
XP_042151288
LinkDB
All DBs
Position
LG13:complement(22054264..22080397)
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AA seq
1439 aa
AA seq
DB search
MGNTATKFRKALVSGDEALAWQLYEGNSQFREGLDPNASYGETYQHNTPLHYTCRHAMTR
LLRSFLFSKEGNPNKRNVQNETCLHALCQGAHILLLPEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLDRGQYERVNINATDNRNSTCLHYAAAAGMKSCVELLVQAGSDLFVEDEEK
LTPCDHAERQQHTHLALRLEAMMVFSQHTHTETQTPSSTLRHKEPYEGLKLQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDSEECCQRSGVLMPTPPPSGCNAW
DTLPSPRTPRSPLTLTLTSLTDSCLTPGEEGGTTCGICLCSISVFEDPIDMSCGHEFCRA
CWEGFLNVKIQEGEAHNIFCPACDCYQLVPVQVIESVVSREMDKRYLQFDIKAFVENNPS
IRWCPAVRCERAVRLTRPGPGVNHLGFPLLPSPAVDCGKGHLFCWECLGEAHEPCDCQTW
RMWLQKVSEMKPEELAGVSESYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCK
YDFCWICLEEWKKHSSSTGGYYRCTRYEVITQLEEQSKEMTGEAEKKHKSFQELDRFMHY
YSRYKNHEHSYKLEQRLLKTAKEKMEQLSRAFIGCEGSPPDTRFIEDGVCELLKTRRVLK
CSYPYGFFLQPHSTQKEIFELMQTDLEMAVEDLAQKVNRPYLRTPCHKIVSAACLVQQKR
EEFLASVARGVAPNDSPEVPRRSFPAGSWDWEYLGFTSPEEYADFQYRRRHRPRRRGDMP
SLHSLRSNSSTPEPNQNPENTEVLQERVEGRRQPLRSLDEDDPNILLAIQLSLQDSRRER
EMDRGMGGGLERGSGVIEGPGLGSGQGLDIGPVMGPGVGSLSETQDPSSVGGSLGASGSS
NLPRPDPNQSLNAELLELGESLMRLGQITTPYTLDNTNIPTPYSLDHTYDHYNPSPRYSQ
SQDLSYTSYTTDHSYAVLEPDLSTPYTHGYSHTCDHNQDHTTINIPFTPEHDHNCGQNQN
RGHPTINAFYSSVHCQPSLYTKSSPSHTDLTASSSPKHTSLYPSDPEPYAMFSLSHNPEP
DQTISCTQDTHPDQNHHHCCHSSHYTPNPDPYTPNPDHYTPNTDPYTPNPDPYTPNPDPY
TPNPDHYTPNPDPYTPNPDPYTPNPDPYTPNPDSYTPNPDSYTPNPDHYNPNPDPYNPNL
DPYTPNPDYTSNPDPCRTSSDPHGLLLPSPDPELLSPVVPPGGPFTPSDPGCLERLDPSA
EALLLDNIMAWIQHTHPQDSPQNIDLIPSASSETGSPPEKYSPPDTETDSPTVSLQDGGD
PKSDSPPDAQASFSGEALAELRQGEASRGQAGSPGPGDSLEVKRPSTLDLECCEGEECVE
CVVTGFVSDLSQDAMDTHIHSHTHCGDDNLTPTKTDSSPTAWVVEDQSRAEWEEQVHLV
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagccactaagttccggaaggctctagtcagcggggacgaggcgttggca
tggcaactgtacgagggcaacagccagttcagagaggggctggaccccaacgcgtcctat
ggagagacctaccaacacaacacacccctccactacacctgcaggcacgccatgacacgc
ctgctcaggtcgttccttttcagtaaagaagggaaccctaacaagcggaacgtgcagaat
gagacatgtctgcatgcgttgtgtcagggagcgcacatcctgctgctgccagagggggca
ctgtctcccagactggccagaccacagagagacgaacaacgcagggcagactgcctacag
atgatcctgagctggaccggggctaggctggacagaggacagtatgaaagggttaacatt
aatgctacagacaacaggaacagcacctgtctacactacgctgctgctgctggcatgaag
agctgtgtagagctcctggtccaggctgggtcagacctgtttgtggaggatgaggagaag
ttaaccccgtgtgaccacgcagagagacagcagcacacacacctggccctgcgcctcgaa
gccatgatggtgttctcacaacacacacacaccgagacacagacacccagcagcacgctg
cgccataaagagccctatgagggtttgaagctgcaggacttgaggagactgaaggacatg
ttgatagtggagacagctgacatgctgcaggctcctctcttcaccgctgaggcactgctc
agagcacacgactgggacagagagaagcttttggaagcctggatgagtgattctgaggag
tgctgccagcggtctggggtcttgatgcccacacccccgcccagcgggtgcaatgcttgg
gacaccctgccttccccgcgcacccctcgctcccccctcaccctaaccctcacatccctc
actgacagctgcctcaccccaggggaggagggagggactacgtgtgggatctgcctgtgt
tccatctcagtgtttgaagacccaatagacatgtcctgtggtcatgagttctgccgagcc
tgctgggaagggtttctgaatgtgaagatccaggagggtgaggctcataacatcttctgt
cctgcctgtgactgttaccagctggtgcctgttcaggttatagagagtgttgtctccaga
gagatggacaaacgatacctgcagttcgacatcaaggcgttcgtggagaacaacccatct
atccggtggtgcccggcagtgcggtgtgagagagcggtcagactgaccagacctggtccg
ggggtcaaccacctggggttccccctgctgccctcccctgcagtcgactgtggcaagggt
cacctcttctgctgggagtgtctaggtgaggcccatgagccatgcgactgtcagacatgg
aggatgtggctgcagaaagtctcagagatgaagccagaagagttggcaggtgtatcggag
tcgtatgaggatgcagctaactgtctgtggttgttaaccaactctaaaccctgtgccaac
tgcaagtctcccatacagaagaatgagggctgcaaccacatgcagtgtgccaagtgtaaa
tatgacttctgctggatctgtctggaagagtggaagaaacacagctcttcaactggagga
tactaccgctgtacacgctatgaggtcatcacacagctagaggagcagtccaaagagatg
actggagaggcggaaaagaagcacaagagttttcaggagttggaccgcttcatgcactac
tacagccgctataagaaccatgaacacagctataagttagaacagagactattgaaaaca
gccaaagagaagatggaacagctgagtagagccttcattggatgtgagggctccccccca
gacaccagatttatagaggacggtgtgtgtgagttgttgaagacacgtcgtgtgttgaag
tgttcctacccctacggattcttcctccagcctcacagcacacagaaggagatatttgaa
ctcatgcagactgatctggagatggcggtggaggacttggctcagaaggtgaaccgtccc
tacctgcgtacgccgtgtcataagatagtcagtgctgcctgtctggtacagcagaagaga
gaggagttcctggcttcggtggctagaggggtggcccctaacgactcacctgaagtacct
aggaggagtttccctgctggatcatgggactgggagtacctgggattcacctctcctgag
gagtatgctgatttccagtaccggcggagacaccggccgcgtcgtagaggagacatgccg
agtttacacagtctgaggagcaacagcagtactcctgagcccaaccagaaccctgagaat
acagaggtcctccaggagagagttgaggggcggagacagcctctgaggtcactggatgaa
gatgaccccaacattctactggccatccaactgtcactacaggactcacggagggagaga
gaaatggatagagggatgggaggaggactggaaagaggctctggtgtgattgagggccca
gggcttgggtctggacagggtctggatatagggccagtaatgggtccaggggtggggagc
ctcagtgagactcaggacccctccagtgtgggtggttctctgggggccagtggctcctct
aacctccctagaccagaccctaaccagtcgctaaatgctgagctgttagagctaggagaa
agtctgatgagactgggacaaataactactccatataccctagacaacactaatatccct
acgccatatagcttagatcacacctacgaccactacaacccttcccccaggtacagtcag
agtcaggaccttagctacacatcttatacaactgaccacagctatgctgttctggaacct
gacctcagcacaccttatacacatggctacagtcacacctgtgatcataaccaggaccac
accactatcaacattcccttcactccagaacacgaccataattgtggtcaaaaccaaaac
cgtggccatcctactatcaatgccttctacagttctgttcactgccaacccagcctctac
actaaatcatctccttctcacacagaccttacagcatcatctagccctaaacacacaagc
ctttacccctcagacccagagccatatgctatgttcagcctttcccataaccctgaacca
gaccaaaccatctcttgcacccaggacacacatcctgaccagaaccaccaccattgctgc
cactccagccactacacccctaacccagacccttacacccctaacccagaccattacacc
cctaacacagacccttacacccctaacccagacccttacacccctaacccagacccttac
acccctaacccagaccattacacccctaatccagacccttacacccctaacccagaccct
tacacccctaacccagacccttacacccctaacccagactcttacacccctaacccagac
tcttacacccctaacccagaccattacaaccctaacccagacccttacaaccctaacctg
gacccttacacccctaacccagactacacctcgaatcctgacccatgccgcacttcttca
gacccccacggcctcctgctcccctccccagacccagaactcctctccccagtggtccct
ccaggtggtcccttcacccccagtgacccgggctgcctggagcgcctggacccctcagct
gaagccctgctcctggacaacatcatggcctggatccaacacacacacccccaggacagc
ccccagaacatcgacctcatcccctcagctagctccgagactggctcacccccggagaaa
tactcacctccggacacagagacagactcacccactgtttcactccaagatggtggggac
ccaaagagtgattcccctcctgacgcccaggccagtttcagcggggaggccctagccgag
ctacggcagggagaggcgagtaggggacaggctggctcccccggccctggagacagcctg
gaggttaaaagacccagcactctggatctggagtgttgtgagggtgaggagtgtgtggag
tgtgtagtcacagggtttgtgtcggacctgtcgcaggacgcaatggacacacacatacac
tcacacacacactgtggagatgacaacctcactcctaccaagacagactcaagccccacc
gcctgggtagtggaggaccaatcacgcgcggagtgggaagagcaagttcacctggtgtga
DBGET
integrated database retrieval system
