Oncorhynchus tshawytscha (Chinook salmon): 112264481
Help
Entry
112264481 CDS
T05605
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112264481 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112264481 (clasp2)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112264481 (clasp2)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
112264481 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
Cnd1
ParcG
IFRD
TAN
Motif
Other DBs
NCBI-GeneID:
112264481
NCBI-ProteinID:
XP_042151309
LinkDB
All DBs
Position
LG13:22378331..22467817
Genome browser
AA seq
1574 aa
AA seq
DB search
MEEHDNMDYFYQQVLQKDVTRRLQVGQDLIDYLNDPQRSTDVEQDKPRLDKTVDELTGWV
NSSNYKVALLGIDIAGAFVDRLGERFRGYLGTVVPALVDRLGDSKDQVREQSQTVILRCM
EVTASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNMYGAQPLSLSKIVPYLCTLTGDQ
NPQVREAATASLVDVYRHIGERVRADLGKRGLPATRLQTIYGRFDEALNSGNMALSPSHV
SQISIVLRPSPKRRQPRRIILRHNHSFEDDVDSTDGSRAQAAFKVPKIPKKPAESSTARR
PSATGPKIGGASKDGAGGIDEEDFIKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDW
DQRAAAMKKIRSLIVAGATEYECFFQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTV
LGNKFDHGAEGILPILFNLIPNCAKVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSV
AVRRKCFDFLDLLLQEWQTQTLERHTAVMVASIKKGIADADAEARVEARKAYWGLRNHFP
GEADSLFNSLEPSYQRSLQSSLRNAGSVASLPQSDRSSSSSQESLNRPLSSKWSAAPGRV
PAGHKGGASPGSLQRSRSDVDVNAATVAKQRHIGQVGAGRLTPGSYSSLDDASDKMDGAR
SVNGRLRTKQPLTTATSVSQVDSRGRTRTKMVSQSQRSDESDCTPGSQSATPIGAGSRSG
SPGRVLTSTALSTLGSGAQRVLAGAGGRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNG
ASRGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTPLASRHYSRSTGALHTADALGA
AGSGYSISQSSRLSSSVSAMRILNTGSDVEEALADALLLGDMRSKKKPARRRYENYGMYS
DDDANSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQAL
LKNQRTLSRVELKRLCEIFTRMFADPHSKRESGSRVYGTTESGISSASFKRVFSMFLETL
VDFVLVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQRALDITRESFPNDLQFTILMR
FTVDQTQTPNLKVKVAVLKYIETLTLQMEPQDFVNSSETRLAVSRVITWTTEPKSSDVRK
AAQSVLISLFQLNTPEFTMLLAALPKTFQDGATKLLQNHLRNTGNAAQAPTGSPLTRHTP
RSPASWSSPLTSPTNTSQNTSSPSAFDYDTENMNSEDIYSSLRGVTEAIQNFSVRSQEDM
NEPVRRREGEEGGSAGADQVDGGRTALDNKTSLLNTPLLSSSPRGSRDPFTDSPFKHSVI
DTSLDESDQQTDDSSIDQSELVSELLKELSNHNERVEERKAALCELLKLIRENTLQVSWD
EHFKTILLLLLETLGDREHVIRALALRVLREILSRQPWRFKNYAELTIMKALEAHKDPQK
EVVRAAEETAAMLASSISPDQCIKVLCPIIQSADYPINLAAIKMQTKVIERVPHEGLVSM
LPEMVPGLIQGYDNSESSVRKACVFCLVALYAVIGEELKPHLNQLSGSKLKLLNLYIKRA
QSGSSGGEPPADSL
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggattatttttaccagcaggtcctgcagaaagacgttacc
cgcaggctgcaggtcgggcaggacctcatagactacctgaacgacccgcagaggtccacc
gatgtggagcaagacaaaccacggctggataaaactgtagatgagctgacgggatgggtc
aactccagcaactacaaggtggcgttgttggggatagacattgccggggcgtttgtcgat
cgcttgggggagcgcttcagaggatacctgggaacagtggtccctgcgttagtggaccgg
ttgggggacagtaaggaccaggtcagagaacagagtcagacggtcatcctccgctgtatg
gaagtcacagcatcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aatttccgcagcagagagggcgtgtgtctggttctctgcgccaccctcaacatgtatggt
gctcagcctttgagtctcagtaagatcgttccgtacctctgcactctgacaggagatcag
aacccacaggtgcgtgaggctgccacagcatcgctggtggatgtgtatcgccacatagga
gagagagtcagagccgaccttggaaagagaggcctgcctgccacacggttacagacaata
tacggccgttttgatgaagcgttgaattctgggaacatggcgctcagccccagtcacgtc
tcacagatttctatcgtattgcgtccatctccgaaaagaagacaaccaaggagaatcatc
cttcgtcataaccatagttttgaggatgatgtggacagtacagatgggagccgtgctcag
gctgccttcaaagtccccaaaatccccaagaagccggcagagtcctctactgcacgcaga
cccagcgctacaggacccaagatcggaggtgcgtctaaggatggagctgggggcatcgat
gaggaagacttcatcaaagccttcactgatgtccccacagtacagatctactcgtctcgt
gacctggaggataacctgaataagatcagagagatctgttctgatgacaaacatgactgg
gaccagagagccgctgcaatgaagaagatccgctcgctgattgttgccggggcaacggag
tacgagtgtttctttcaacacctgaggctgttggacggagcgttcaaactgtcagctaaa
gacctccgatcacaggtggtacgagaggcctgcatcactgtggcccacctgtcgacagtg
ttgggtaataagtttgaccatggtgctgagggcattcttcctatcctgttcaacctcatc
cctaactgtgccaaggttatggccacttcaggggtgtctgctatacgcttcatcatacgg
cacacacatgttcccagactcattcccctgatcaccagtaactgcacctgcaagtctgtg
gccgtcagaaggaaatgttttgacttcttggacctgctgctgcaggagtggcagacccag
actctggagagacatacagcagtgatggtagcgagcattaagaaggggattgcagatgcc
gacgcagaggccagagtagaggcccgcaaggcgtactggggtctgaggaaccattttcct
ggagaggcggactctctgttcaactcgttagaaccgtcctatcagaggagcctccagtcg
tctctcaggaatgccgggagcgtggcgtctcttcctcagagtgaccgctcctcttcctct
tcacaggagagcctcaatcgtcctctgtcgtctaaatggtcagctgctcctggtagagtc
ccggctggtcataagggcggggcgtcgccaggctccctgcagcgttcccgtagcgatgtg
gatgttaatgcagcaacggttgctaagcagcggcacatcgggcaggtgggggcggggaga
ctgacccccggctcctactcgtcattggatgatgcctctgataaaatggatggggccagg
tcagtcaatggtcgtctgaggaccaagcagcctctcaccactgcgaccagcgtcagccag
gtggactcccggggacgcacccgcaccaagatggtgtcccagtcgcaacgttccgacgaa
tcagattgcacgccaggatctcagtctgctacccccattggtgccggcagtcggagtggt
tccccgggtcgcgtcctgaccagcaccgctctgagtactctgggttctggagcccagagg
gtcctagctggggctggagggagacgtagccgcatcccccgcagccagggctgctcacga
gactcctcccctacacgcctgtctgtcgctccctccagtattagttccatctacaacggt
gcaagcagaggagctcggggcagtcgtatcccccggcccagtatgagtcagggctgcagc
agggaggccagcagagagagcagcagagacaccagccctgtacgctcctttacacccctg
gcgtcgcggcactactctcgctccactggagctctccataccgccgacgctttaggggcc
gcagggtcagggtacagtatcagtcagtccagtcgtctgtcctcatccgtcagcgccatg
agaatcctcaacacaggatctgatgtagaagaggccctcgctgatgccttgctgttggga
gacatgagatccaagaagaagccagcgcggcggcgctatgagaactatgggatgtattcg
gatgatgatgctaacagtgatgcgtccagcgcctgctcagagcgctcctacagctccagg
aatggaggagccatccctacgtacatgagacagactgaggacgtggccgaggtgttgaac
cgctgtgccagtgccaactggtcggagaggaaggagggactgctgggtctacaggctcta
ctgaagaaccaacgcaccctcagtcgtgtggagttgaagaggttgtgcgagatcttcacc
agaatgtttgcagacccccatagtaagcgagaatccggatctagggtctatggaacgaca
gaatccggtataagctcagcctccttcaagagagtgttcagtatgttcttagagaccctc
gtggactttgtcctggtgcacagagaagacctgcaggactggctgttcgtcctgctcacc
cagctgctgaagaagatgggagctgacctgctgggatcagtacaggccaaggtccagaga
gcactggacatcacacgagagtctttccccaacgacctccagttcactatcctcatgagg
ttcactgtggaccagactcagacaccaaacctcaaggtgaaggtggctgttctgaagtac
attgagaccttgaccctgcagatggagccgcaggactttgtgaactccagtgagacgcgc
ctggctgtgtctcgcgtcatcacctggaccacagagccaaagagctccgacgtcaggaag
gctgcccagtcggtgttgatctcgttgttccagttgaacactccagagttcaccatgctg
ctggcagctctgcccaagaccttccaggatggcgccaccaaactgctacagaaccacctg
aggaacacaggcaatgctgcacaggccccgacaggaagccctcttacacgccacaccccc
cgctctcctgccagctggtccagccccctcacctctcctaccaacacatcacagaacaca
tcctcacctagtgcatttgactacgacacagagaacatgaactcagaggacatctacagt
agtctgagaggagttacagaggccatccagaacttctccgtccgtagccaggaagacatg
aacgaaccggtcagacggagggaaggagaggagggtggtagtgctggtgctgaccaggtg
gatggaggtcgtacagctctggacaacaagacgtctctcctcaacacccccctgctctcc
tcttctccccgggggtcccgtgaccccttcactgactcccccttcaaacacagcgtcata
gatacttcactagacgaatcagaccagcaaactgacgacagcagcattgaccaatcagag
ctggtgtctgagctgctgaaggagctgtccaatcacaatgagcgtgtggaggagaggaag
gcagcgctttgtgagctcttgaagctgattcgagaaaacaccctgcaggtctcctgggat
gaacacttcaaaaccatcctcctgttactactggagacgctgggggacagagagcatgtg
atcagggcgttagctctgcgtgttctgagggagattctgagccgccagccctggaggttt
aagaactacgctgaactcaccatcatgaaggccctggaggcgcacaaggacccacaaaaa
gaggtggtgcgagcggcagaggagactgcagccatgctggcgtcgtccatcagtccagac
cagtgtatcaaggtgttgtgtcccatcatccagtcagctgactaccccatcaacctggct
gccatcaagatgcagactaaagttatagagagggtcccccatgaaggactagtcagcatg
ctgcctgagatggtccccggactcatacagggttatgacaactctgagagcagtgtgagg
aaggcctgtgtattctgtctggtggccctctacgcagtcataggggaggagctaaaacct
cacctcaaccaactgtctggcagcaaattgaagttgttgaatctgtacatcaagcgtgcc
cagtccggctccagtggtggtgaacccccagcagacagcctatag
DBGET
integrated database retrieval system
