KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112264492
Entry
112264492         CDS       T05605                                 
Symbol
sdc3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514  Cell adhesion molecules
otw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112264492 (sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112264492 (sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:otw00535]
    112264492 (sdc3)
Proteoglycans [BR:otw00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   112264492 (sdc3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 112264492
NCBI-ProteinID: XP_042151353
LinkDB
Position
LG13:22675367..22719234
AA seq 421 aa
MKLPPCLMTVLAALLAHSALGQTWVPSIDLEGSSGDEFYDDEDLFSGSGSGFPEMKVNPT
AVGVSFSTEEPLPLSTTQATGPAPSAPPAAEPNPNPDALPTPLPTEGEGESGIEWERGRE
RERERERERVREMEREREKERERERERERQREIERERERERERARAAQTTISPRGPAAVP
MATTSTATPLAESVAPSSGVQDLVTTEEEDEDVYLSPDPTSMPMETTTEEEEEEEEVTTT
DTETTPLPKTTAPPTTIGPALTERSSSAPFRPSVLVTTPIKAAPTERSTRPQQPSTTMNN
ELGVNGPSGDFEIREEDRRQGNEVVGRGLGMETGAEPDLIGNTINTGSSAAQLPQKNILE
RKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKADKQEEFY
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaagctgccgccgtgtctgatgacggtcctcgcggcgctgctcgctcactccgcgctg
ggtcagacctgggttccgtctatagatctagaaggttcttctggagatgagttctatgat
gacgaagacctcttctcaggctctggatctggctttccagagatgaaggtcaaccctaca
gcggtgggtgtgtctttcagcactgaggagccccttcccctttccaccacccaggctact
ggccccgccccctcagccccacctgcagccgagcccaatcccaaccccgacgctctaccc
accccactacccactgagggagagggggagagtgggatagagtgggagagagggagggag
agagagagggagagggaaagagagagagtaagggagatggagcgggagagagaaaaggag
agggagagagaaagagagagagagaggcaacgggaaatagagagggaacgagaaagagaa
cgtgaaagagcgagagccgcccagaccaccatctcaccccgtggcccggcggctgttccc
atggcgaccaccagcacagcgacgcctctggcggagagtgtagcaccctctagtggcgtg
caggacctggtcaccacagaagaagaggacgaggatgtctacctgtccccagaccccacc
agtatgcctatggagaccaccacggaagaagaagaagaagaggaagaggtgaccactaca
gatacagagaccacacccctcccaaagacaacagctccacccactacgattggcccagcc
ctaactgagaggtctagctccgccccctttagacccagtgttctggtgaccacgcctatt
aaagccgcacccacagagaggagcacacgcccacagcagccttctacgacaatgaataat
gaattaggggttaatggacccagcggagactttgagatccgggaggaggaccgtcgccag
ggcaacgaggttgttggtcgtggccttggcatggagactggggcagaacctgatctgatt
ggcaacacaattaacacaggaagttctgctgctcaacttcctcagaagaacatcttggag
aggaaggaggttctgatagcggtgatagttgggggcgtggtgggggccctgtttgcagca
ttcctggtcatgctgctggtgtacaggatgaagaagaaagatgaaggcagctacacactg
gaagaacccaagcaagccaccgtcacctaccagaaagctgacaaacaggaggagttctac
gcataa

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