Oncorhynchus tshawytscha (Chinook salmon): 112264512
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Entry
112264512 CDS
T05605
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112264512 (irx1b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112264512 (irx1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112264512
NCBI-ProteinID:
XP_024296932
UniProt:
A0A8C8I7A6
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Position
LG13:complement(23855671..23859951)
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AA seq
451 aa
AA seq
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MSFSQLGYPQFLSGSQEVYGGDRAGSGRDGGAESGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNSQYDLKDSPGVHPGGLAVHTGAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPEKQESEDEEDEEIDLESIDIDKVEENRGDQREGEGEGKLAS
DSSSLESQRKLSVEALRGMEGPISLIKAPVGACKNAVDLSPNGPGCQRPPQNKPKIWSLA
ETATSPDSSHKPSPAASAPHAATSPSHHPALLPGHGIYTCQIGKQLHNWANAAFLSANSL
LGVRSLLSTANPAGHHMPLHGALKRQDARAAQASGASEDESGDESSESFSPKRDDDVNIR
RSGSPKSPFQLITDRSHHGTAQRALSTISTI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtatccccagtttctaagtggctcccaggaggtttatggg
ggcgaccgggccggctctggccgggatggaggcgccgagagcggcgtgaatcaggcagct
actgccgctgctgttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgccctcatatcgcaaatgaactcc
cagtatgatctgaaagacagccccggagttcacccgggaggtctggctgtccacaccggc
gcggggttctacccgtatggccagtatggctacggcgacccgaaccgagccaaggccgcc
accagggagaccaccagcactctgaaggcctggctgcaggagcaccagaagaacccgtat
cccaccaagggagaaaagatcatgctggccatcatcactaagatgacacttacacaggtg
tccacgtggttcgccaacgcgcgcaggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggatggacggatcttcagtagtgacaatgaggacgagcctgag
aaacaggagagcgaggatgaagaggacgaggagatcgatttagagagtatcgacattgat
aaagtcgaggagaaccgtggagatcagagggaaggggagggagaggggaagctggcatcg
gattcgagtagcttggagagccagaggaagctgtctgttgaagccctcagaggcatggag
ggtcctatttctctcatcaaggcgccggttggtgcttgtaaaaacgcagtggatctttcc
cccaatggaccggggtgccagaggcccccacagaacaaacccaaaatctggtctctggcg
gagacagccacaagccctgacagttcccataaaccttccccggctgcctcagctcctcac
gcggccacgtctccctcccaccacccggccctactcccgggtcatggaatatacacttgc
cagatagggaagcagctccacaactgggccaacgcggcgttcctcagtgccaactctctt
ctgggcgtcaggtcgcttctcagcacggcaaacccagctggacaccacatgcctctccat
ggcgcactgaagcgtcaggacgcaagggcggcgcaggcttcaggggcatccgaggacgag
agtggagatgagtcgtcggagagcttcagtccaaagcgagatgatgacgtgaatattcgc
aggtctggctcgccgaagtctcccttccagctgatcaccgacagatctcaccacggaacc
gcgcaacgcgctctctcgaccatttccacaatatga
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