Oncorhynchus tshawytscha (Chinook salmon): 112264522
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Entry
112264522 CDS
T05605
Name
(RefSeq) ATP-binding cassette sub-family F member 1-like isoform X2
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
otw03012
]
112264522
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112264522
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_28
ABC_tran_Xtn
AAA_16
AAA_14
AAA_22
AAA
RsgA_GTPase
NACHT
AAA_5
AAA_24
AAA_18
MMR_HSR1
cobW
AAA_23
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
112264522
NCBI-ProteinID:
XP_024296949
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All DBs
Position
LG13:24021918..24055319
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AA seq
855 aa
AA seq
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MPKKAKEDAEWEGEEGAVAPSAVAEKSVKKGKKDKKGKKSFFDELATDNKTEKEDEIVLK
EMQGKQKKKKDRRKGRSGEGDDDDDEDMMEKLKKLSVQASEDEEEEVVAPGKGKGNKGGN
IFAALSQGDSDDDGGDDERLMNKEVEKVHKGKKKDKPKPKAKAPSDDEEEKKDGDEKTAV
KKNMKPEAKPAPKATEEDEAEDEKPQPKKGKKEQPKRMNKPARPPRSEDEEAEDDEDDTM
KCAEDVIAEQEQEKGDDPFANMSKKEKKKKKKMIEYEKQVASVRAANAIEGDFSVSQAEL
SSRQAMLENASDIKLERFSISAHGKELFVNADLLVVAGRRYGLVGPNGKGKTTLLKHIAN
RVLSIPPNIDVLLCEQEVMADDTPAVQAVLKADTRRLKLLEEERQLQALLEKGEDSVAER
LDKVYEELRIIGAAAAEAKARRILAGLSFTPEMQNRATKKFSGGWRMRVSLARALFMEPT
LLMLDEPTNHLDLNAVIWLNNYLQGWKKTLLIVSHDQSFLDDVCTDIVHLDNQKLYYYRG
NYLTFKKMYVQKQKELQKQYDKQEKKLKDLKAGGKSTKQAEKQTKEALTRKQAKGKKKGG
VEEESQEATELLKRPKEYTVKFTFPNPPSLSPPILGLHSVDFAFEGHKPLFKNVDFGIDM
ETRICIVGPNGVGKSTLLLLLTGRLNPSKGEMRKNHRLKVGFFNQQYADQLNMEEAATEY
LQRNFNLPYQDSRKCLGRFGLESHAHTIQISKLSGGQKARVVFAELACRQPDVLILDEPT
NNLDIESIDALSEAINEYKGAVIIVSHDARLITETACQLWVVEDRSVNQIDGDFEDYKRE
VLESLGETLVHKVKE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaagcgaaagaagacgcagaatgggaaggagaagagggagcagtagcacca
tcagcggtggcagaaaaatcagtaaagaaaggaaagaaggataaaaaggggaagaagagt
ttctttgatgaactggccacagataacaaaactgagaaggaggatgaaattgtgctgaaa
gagatgcaaggaaagcagaagaaaaagaaagaccggcggaaaggtagaagtggtgaggga
gatgatgatgatgacgaggatatgatggagaaactaaagaagctgtcagtgcaagccagc
gaggatgaggaagaggaagttgtggcccctggaaaaggcaagggaaataagggtgggaac
atctttgccgctctcagtcagggagacagtgatgatgacggtggtgatgatgagagactg
atgaataaggaggttgagaaggtgcataagggcaagaaaaaagataagccaaaaccgaaa
gccaaggctccctctgatgatgaggaagaaaagaaagacggggatgaaaagacagctgtg
aaaaagaacatgaagccagaggctaaaccagcacccaaggcaactgaggaggatgaagcg
gaggacgagaagcctcagccaaagaaaggcaagaaggaacagcccaagaggatgaacaaa
cctgctcgccctccgcgcagcgaagatgaagaggctgaagacgacgaagatgacacaatg
aagtgtgctgaagacgtgatagcagagcaggagcaggagaaaggtgacgacccctttgcc
aacatgagcaagaaggagaagaagaagaaaaagaaaatgattgagtatgagaagcaggta
gccagtgtgcgtgctgccaacgccattgagggagacttctccgtgtcccaggctgagttg
tcttccaggcaggccatgctggagaacgcatcagatatcaagctggagaggttcagtata
tcagctcacgggaaagagctgtttgtcaatgcagatctcctggtggtggcaggaagacgc
tacggtctggttggacctaacgggaaggggaagaccacgcttctgaaacatatcgccaac
agagttctcagtatccctcctaacattgatgtgctgctctgtgagcaagaggtgatggcg
gatgacaccccagcggtccaggctgtgttgaaggcagacaccaggcgtctgaagctccta
gaggaggagagacagttgcaggctctcctggagaaaggagaagacagcgtggctgagaga
ctggacaaggtctatgaggagttgaggatcatcggggcagcagcagcggaggctaaagcc
cgtcgtatcctggctggtctgtccttcaccccagagatgcagaacagagctactaagaag
ttctctggaggctggaggatgagagtctcactagccagagctttgttcatggagcccacc
ctgctgatgctggatgagcccaccaaccatcttgacctcaacgctgtcatctggctcaac
aactaccttcagggctggaagaagactctcctcatcgtgtctcacgaccagagtttcctg
gacgatgtgtgtactgacatagttcacctggacaaccagaaactttactactacagaggg
aactacttgacgtttaagaagatgtacgttcagaagcagaaggagcttcagaaacagtac
gacaaacaggagaagaagctcaaagatctcaaggctggagggaagtccaccaaacaggcc
gagaagcagactaaggaagccttgaccaggaagcaagcaaagggaaagaaaaagggagga
gtggaggaggagagtcaggaagctacggagttgctcaaacgacccaaagagtacactgtc
aaattcaccttccccaaccccccttctctctctcctcccatcctcggattgcacagtgta
gactttgcctttgagggacacaaacccctcttcaagaatgtggactttggtatcgacatg
gagactagaatttgtatagttggacccaatggagtcgggaagagtaccctactactactt
ctcacgggcaggttaaatccatccaagggggagatgagaaagaaccatcggctgaaggtg
ggcttcttcaaccagcagtatgccgaccagttgaacatggaggaggcagctacagagtac
ctccagaggaacttcaacctgccctaccaggacagcaggaagtgtctgggccgcttcgga
ctggagagccacgcacacaccatccagatctccaaactatcaggtggtcagaaagccaga
gtggtgttcgctgagctggcctgtcggcaacctgacgttctcatcctggatgagcctact
aacaacctggacattgagtcgatcgatgccttatcagaagctatcaacgagtacaaagga
gcggtgatcattgtgagtcacgacgcccggctcatcactgagacagcctgtcagctgtgg
gtggtggaggaccggtccgtcaaccagatagacggagactttgaggactacaaacgggag
gtcctggaatcactgggggagaccctggtccacaaggtcaaggagtga
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