Oncorhynchus tshawytscha (Chinook salmon): 112264537
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Entry
112264537 CDS
T05605
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00603
Glycosphingolipid biosynthesis - globo and isoglobo series
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
112264537
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112264537
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
112264537
Glycosyltransferases [BR:
otw01003
]
Glycan extension
FORS blood group (Forssman antigen)
112264537
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
112264537
NCBI-ProteinID:
XP_024296971
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All DBs
Position
LG15:2307831..2318619
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AA seq
363 aa
AA seq
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MRFFTKIRPSFTLPLFGIVLLGVLVLTYCYSSFGEVKNKDVRILEVLGLCQQDPVNFRRE
NCSCRTRDMLSPQGLLYKQPSVLKGRTNVVTVTPWLAPIVWEGTFNPLIVDSIYKPMHLS
IATTVFAVGKYVRFLRDFLETAEKHFMVDFKVHYYIFTDRREDVPAVVLAPGRNVTIIPV
PGSNRWQEISSRRMEMIQTAIENQIGKEADYIFCLDVDTKFHGRWGAETLSRLVATIHPG
YYEHTHEHYPYERRPASRAYIPAGEGDYYYGGATIAGYVRDVHKLTKYCREQLEADAANS
IEAAWQEESHLNRYLLYNKPTKILSPEYLWQDFKAKNNEVQIIRFSQVNKNYAEVRPNVK
KRK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttttcacaaaaatccgtccttccttcactctgccactttttggaatcgtactt
ttgggagtcctggttttaacatattgttactcatcatttggtgaggtgaaaaacaaggat
gtcagaattctagaagttttggggttgtgtcagcaggaccctgtcaatttcaggcgggaa
aactgtagttgtaggacccgggacatgctgtccccacagggactcctgtataagcagccc
agtgtgttaaaggggcgcaccaatgtggtaactgttaccccttggttggcaccaattgtc
tgggaaggcacctttaatcccttgattgttgacagcatttacaagcctatgcacctcagc
attgccacaactgtctttgcggttggcaagtatgtgcgcttcctgcgtgacttcctagag
actgccgagaagcatttcatggtggatttcaaagtgcactactacatcttcactgaccgg
agggaagatgtgccagcggtggtcctcgctcccggtagaaatgtaaccatcatcccagtc
cctggctccaaccgctggcaggagatctcctccaggaggatggagatgatccagaccgcc
atcgagaaccagataggcaaggaggcggactacatcttttgcttggatgtggacacgaag
ttccacggacggtggggggcagaaacattgagcaggctggtggccactattcacccaggt
tactatgagcacacccacgagcactacccttacgaacgccgtcctgcctcgcgggcctac
atccccgcgggggaaggagactactactatggaggcgccaccatcgctggctatgtgagg
gacgtgcacaagctgacaaagtactgccgcgagcagctggaggccgatgccgccaactcc
atcgaggcggcatggcaggaggaaagccacctgaacagatatctcctttacaacaagccc
actaagattctgtctccggaatacctgtggcaagacttcaaggccaagaacaacgaggtg
caaataatccgcttctctcaggtcaacaagaactatgcagaggttcggcccaacgtgaag
aaaagaaagtaa
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