Oncorhynchus tshawytscha (Chinook salmon): 112264546
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Entry
112264546 CDS
T05605
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112264546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112264546
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
112264546
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
112264546
NCBI-ProteinID:
XP_024296985
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Position
LG15:complement(2368309..2378337)
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AA seq
561 aa
AA seq
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MALNWPGLLSIGVFYLIVLATGVWASRKSKREERKCTGNLSEVAMVGGRNLNIWVSIFTT
TATWVGGGFILGNAEVVYDPKRGLAWAIAPIGFVLSLVVGALFFVKPVREKNYVTIMDPF
QEKYGNTLTAILFIPSLLADIFWIACVLAALGGTVSVIMDIPSPLAVALSAAVAVLYTLL
GGLYSVAYTDVIQLIFMFLSLWFCVPFILMSPASTDITVTAVTKLYQEPWTGRLKLADAG
RWLDDLLLVTLGGICYQAFYQRVLATATVAQAQFTCYAASVFCFILAIPPLLIGAVAAST
DWNQTSFGLPTPYEQGKAGMILPISLRYLCPPFVSLAGIGAIAAAVMSSIDSALLSSASL
FARNIYKNIFSKRASEKQILRVVKVSILLFGFMGAGLAMTTSSVYVFWILSGDVMYTVVC
AQLICVLFLPGKVNGYGALAGLVVGLLLRLLVGEPLLGVPGLMPLPWDSLHEDGRLLHVF
PFRTGIMLVSLATILVVSRFAACLFLKGLLPDNWDVYGLGQKRRILMKDMVAKDLTEKIG
LNTRQMDPSPHASTEDMRSLQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttaactggcccggcctgctgtcaatcggggtgttctacctcatcgtcctcgcg
acaggcgtctgggcatctaggaagtccaaacgcgaggagaggaagtgcactggaaacctt
agtgaggttgccatggttggagggcgtaacctcaacatctgggtcagcatcttcactacc
acagctacatgggtgggaggaggtttcatcttaggcaatgctgaggtggtctacgaccct
aaaagaggcctggcttgggccatcgcaccaataggcttcgtccttagcctggttgtaggt
gcgttgttctttgtgaaaccggtccgagagaagaattacgtcaccataatggatccgttc
caggagaagtatggaaacacattaactgctattctctttatcccatcactccttgctgac
atcttctggatagcctgtgtgctcgctgcattggggggaacggtgagtgtgatcatggat
atcccatcacccttggctgtggccctgtctgctgccgtggcagttctctacacattactg
ggagggctgtactcggtggcctacactgatgtcatccagctcatcttcatgttcctcagc
ctgtggttctgtgtgcccttcatactgatgagccccgcctcaacagacattacagtcaca
gcggtgacaaaactgtatcaggagccatggaccggcaggctgaagttggcagacgcaggg
cgctggctggatgacctgctactggtgactctaggtggaatctgttaccaggccttctac
cagagagtcctggccacagccactgtggctcaggctcagttcacttgctatgctgcctct
gtcttctgcttcatcctcgccataccacctcttctcattggtgctgtggcagcatccaca
gattggaaccagaccagttttggtctacctactccctacgagcagggcaaggcgggtatg
attctgcccatctccctgcgctacctgtgtccacctttcgtctctcttgccggaatcggc
gccattgctgctgctgtgatgtcatctattgactcagccctgctgtcttctgcgtccctt
tttgcccgaaacatctacaaaaacattttcagcaaaagggcctctgagaaacaaattcta
cgggttgtaaaggtgtccatcctactgtttggtttcatgggggcgggcttggcaatgaca
acctcctctgtgtatgtcttctggattctcagtggagatgtgatgtacacggtagtgtgt
gcacagttgatctgcgtcctctttctacctgggaaggtcaatgggtatggtgccttggca
ggccttgtggtagggctactgctgcggctactagtgggagagcccctgcttggtgtgcct
ggactcatgccccttccctgggacagcctacacgaggacgggcgtctgctgcatgtcttc
ccattccgcaccggcatcatgttggtctctctggccaccatcctggttgtgtcacgtttc
gcagcctgccttttccttaaagggctactgcctgacaactgggatgtatatggacttggt
caaaaaaggaggattttgatgaaggatatggtagctaaggatctgactgagaagattgga
ctgaacacaaggcagatggacccatctcctcatgcgagcacagaagatatgaggtcttta
caatga
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