Oncorhynchus tshawytscha (Chinook salmon): 112264547
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Entry
112264547 CDS
T05605
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
112264547 (pwp1)
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
90S particles
Other 90S particles
112264547 (pwp1)
Pre-60S particles
Other pre-60S particles
112264547 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_RFWD3
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
112264547
NCBI-ProteinID:
XP_024296986
LinkDB
All DBs
Position
LG17:complement(22558735..22566678)
Genome browser
AA seq
492 aa
AA seq
DB search
MSSQITCVGWVKRGVSKETPDKVELSKEELQHIIAEAKEQLGERVGEEEEDEGMASGQEQ
SDEAEAVQGQEPEQDENEAGREEADELATYGLDRYDEEDSVTANLGDSLAGLTVFSTNEE
DPYITIKDTDQYEREDFQIKPNDNLVISGRAEKDCCNLEIHVYNAEEESLYVHHDILLPA
YPLCVEWLNFDPSPEGTGNYAAVGNMTPQIDVWDLDVVDCLEPAFTLGSKKASKKKKKSK
KAAAEPVEGHTDAVLDLSWNKLVRNVLASGSADKTVILWDLAQGKPATTLRRHTDKVQTL
MFHPFEAQTLISGSYDKSAILYDCRSPDSSHRTWRFSGQVERVAWNHFSPCNFLASTEDG
FVYCLDARSDKPVFTLRAHDGEVSGLDLSSQIRGCLVTSSADKHVKIWDILGNKPNLVHT
RDMKMGVLFCAACCPDMPFVYAFGGQRDGLRVWDISDVAAVVEVFGNRERLVATTAPEAS
SSTSSTADMELS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaaatcacttgtgttggatgggtaaagcgtggcgtttcgaaggaaacacca
gataaggtggagttgagcaaagaagaattgcaacacattatagcagaggcaaaagaacaa
ttgggtgaacgtgtaggtgaagaggaggaggatgaaggcatggccagcgggcaggaacag
agtgacgaagcagaagctgttcagggacaggagccagagcaagatgaaaatgaagcagga
agggaggaagcagatgaactagcaacgtatggtttggatagatatgatgaggaagactcg
gtgactgccaaccttggtgacagccttgccggcctcacagtgttcagcaccaatgaggag
gatccttacattaccatcaaagacacagaccagtatgagcgagaggactttcaaatcaag
cccaatgataacctcgtaatttcaggcagagcagagaaggactgctgcaacctggagatt
cacgtatacaatgctgaggaggaatccctctatgttcaccatgacatactcctgccagcc
tatccactgtgtgtggagtggcttaactttgaccctagtccagaaggcactggcaattat
gcggctgtaggcaacatgacaccgcagattgacgtgtgggacctggatgtggtggactgc
ctagagcctgccttcactctggggagcaagaaggcctccaagaagaaaaagaaaagcaaa
aaggctgcagcagagccagtggaaggccataccgatgctgtactggacttatcctggaac
aaactggtccgcaacgtcttggccagtgggtcagccgacaaaaccgtgatcctgtgggat
ctggcacagggaaagccggccacaacactgcgcagacacactgacaaggttcagacgttg
atgttccacccctttgaagctcagaccctgatatcaggatcatacgataagtcggcaatc
ctgtatgactgccgcagcccggacagcagccatcgcacttggaggtttagcgggcaggtg
gaacgggtcgcctggaaccacttctcaccctgcaacttcctggcgagcacagaggacggc
tttgtttactgtctggacgcacgctcagacaagccagtgtttacactaagggcacatgat
ggagaggtgtcaggcttggaccttagcagccagatccggggatgcttggtcacctcgtca
gcagacaaacacgtcaagatttgggacatcttgggaaacaagcccaatctagttcacacc
cgggacatgaaaatgggggtgctgttctgtgcagcgtgctgtcctgacatgccctttgta
tatgcctttggaggacagagggatggcctgcgggtttgggacataagtgatgtggcagca
gtcgttgaggtgtttggcaatcgggagcggttggtggcaaccacagcgcctgaggcatcc
agcagtacttcctccacagcagatatggagctttcctag
DBGET
integrated database retrieval system
