Oncorhynchus tshawytscha (Chinook salmon): 112264633
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Entry
112264633 CDS
T05605
Name
(RefSeq) trafficking protein particle complex subunit 9-like isoform X1
KO
K20306
trafficking protein particle complex subunit 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264633
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112264633
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
Vps23_core
Porphyrn_cat_1
Motif
Other DBs
NCBI-GeneID:
112264633
NCBI-ProteinID:
XP_024297136
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Position
LG13:28194213..28517136
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AA seq
1154 aa
AA seq
DB search
MSVPDYMQCAEDHQTVLVVVQPVGIVPEDQFFRIYKRIASVAQVSIRDSQRNLYIRYRHH
YLPENNEWGDFQTHRKVVGLISVTTCGSAKEWPQTLDRFHSQKEVFGATLYDSRLLVFGL
QGEIAEQQRTDVAFYSSYEDCPNVEKRVEDFVESIFIVLESKRLDRATDKSGDKIPLLCV
PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDALVHYHMAVELLRSVNDFL
WLGAALEGLCSASVIFHYPGGTAGKASGRKPSLAQGQGQAADAGKRHRPGAQEVLIDPGA
LTANGISADTSSEIGRAKNCLGPEDIIEKYKEAISYYGKYKNAGVIELEACVKAVRVLAI
QKRAMEASEFLQNAVYINLGQLSEEEKIQRYSILSELYHLIGFHRKSAFFKRVAAMQCVA
PTIPEPGWRACYKLLLETLPGYSLSLDPKDFSKGSHRGWAAVQMRLLHELVYASRRMGNP
GLSVRHLSFLLQTMLDFLSDQEKKEVTQSLENYTSKCPGGMEVLTLPDGLKLPPVAFTKL
PIIRSVKLLDLPVSLRPHKQKGLLENNMSTKSPFIYSPIIMHTRGEERNKKIEFQWVQGE
VCEVQLMVYNPMPFELRVEHMGLLTSGVEFEALPAALSLPAESGLYPVTLVGVPRTAGNI
TVNGYHTSVFGVTSDCLLEGLPSVLTSGCVVEVIPSLPRLQLSTSLPRSAHPLQPSKEEL
SSSVSVQLFNGETQHLTITLENIGSEDLETLEVASKTCNTKEKLFGEFLSWDLDEAVSQL
PLKPGQSVTLTVNIKVRLDFSGGENLLQDLNDDGISVTGLPISSPLRQVLKPRAETKPLG
SESSKTDYNHVKTLEAVMTFKYSGGAGKVEGYYRDLTLGVHVDIEPSVFFTRVSTLPATR
TRQCHLLLDVFNSTEHELTVSANNNQDLVLHASECQRMAIQVDKFDFDTLPQPDQEALRY
TNPKLLEEERLHAQASMINSTLGITWNIPSVRRQGEASVEGVLNQLVLEHLQLAPLQWDV
VVNGKPCDCDLIADCRVGDAVPLEVKLTNRSKNAVGPFALTVVPFQDYQNGVQNYDLQDA
VTFIGSNTFYIDTVKPTENSVCMGALLFLYTGDFYLNIKFQDDSAGQGKELPPSWFGLPS
VHIKALEAPIEAGA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcccagactacatgcagtgtgctgaggaccatcagacggtcctggtggtggtc
cagcctgtgggcatcgtccctgaggaccagttcttcaggatctacaaacgcattgcctct
gtggcccaggtgtccatccgggactcccagcggaacctctatatccgttaccgccaccac
tacctcccggagaacaacgagtggggagacttccagacacaccgcaaggtggtgggcctc
atctccgtgacgacctgtggttcggctaaagagtggccccagacgttggaccgtttccac
agccagaaggaggtgttcggagccacactgtacgactcacggctcctggtgttcgggctg
cagggggagatagcagagcagcagaggacggatgtggccttctactctagctatgaggac
tgtcccaatgtggagaaaagggtggaggactttgtggagtccatcttcattgtgctggag
tccaagaggctggatagagccacggacaagtctggggataagataccactgctctgtgtt
ccctttgagaagaaagactttgtggggctggacactgatagcaggcactataagaagcgt
tgccagggccgtatgaggaagcacgttggggacctgtgtttgcaggcaggcatgttgcag
gatgccctggtccactatcacatggctgtggagctgctccgctccgtcaatgacttcctg
tggctgggggctgcgttagagggcctgtgttcagcctctgttatcttccactaccctgga
ggaacagcagggaaggcttctggacgcaaacccagcctggcacagggccagggacaggca
gccgacgcagggaagagacaccggccaggggcacaggaggtactcattgacccaggtgcc
ctcacagccaatgggatcagtgcagacaccagcagtgagatcggtcgggccaagaactgc
ctgggccctgaggacatcatagagaaatacaaggaggccatctcctactatggcaagtat
aagaatgcaggcgtgatagagctggaggcatgtgtgaaggcagtcagggtgctagccatt
cagaagagggccatggaggcctcagagttcctccagaatgctgtctacatcaacctggga
cagctgtcagaggaagagaagatccagcggtacagcatcctctctgagctctaccacctg
attggtttccaccgtaagtcagccttcttcaagcgggtagcagccatgcagtgtgtggcc
cccaccatcccagagcctggctggagggcctgctacaagctgctgctggagaccctgcct
ggatacagcctctccctcgaccccaaagacttcagcaaaggttcccaccgtggctgggcg
gcggtacagatgcgtctgctccatgagctggtgtacgcatcccgtcgtatgggaaacccc
ggcctgtctgtccgccacctctcctttctgctccagaccatgctggacttcctctcagac
caagagaagaaggaggtgactcagagtctggagaactacacgtctaaatgtccaggggga
atggaggttctcaccctgcctgatggactcaaactgccccctgtagccttcaccaagcta
cccatcatcagatcagtgaagctgctggatctgcctgtcagcctgcgcccccacaaacag
aaaggcctcctggaaaacaacatgtccaccaagagtcccttcatctactctcccatcatc
atgcacaccaggggagaggagcgcaataagaagatagagttccagtgggtccagggagaa
gtgtgtgaggtccagctgatggtctacaaccccatgccctttgaactccgtgtggagcac
atgggtttgctgacatcgggtgttgagtttgaggccctgcctgctgccctgtccctgcct
gctgagtctgggctctacccagtcaccctggtgggggtcccacgcaccgcaggcaacatc
accgtcaacggctaccacacgtcagtgtttggtgtgaccagtgactgtctcctggagggt
ctacccagtgtgttgaccagtggctgtgtggtggaggtcattccatcattaccccgtctc
cagctcagcacctctctaccacggtcggcccatcccctccagccctctaaagaggagttg
tccagcagtgtgtctgtccagctgtttaacggagagacccagcatctgaccatcaccctg
gaaaacattggctctgaagacctggagacgctggaggtcgcctccaagacctgtaatact
aaagagaagttgtttggagagttcctgagctgggacctagacgaggctgtgtctcagctg
cctctgaagccaggccagtctgtcaccctcaccgtcaacatcaaagtcagactggacttc
tctggaggagagaacctgctacaggacctcaacgatgatggcatcagtgtgacaggcctt
cccatctccagccccctgagacaagtcctcaaaccccgggccgagaccaagcccctgggc
agcgagtccagcaagacagactacaaccacgtcaagacgttggaagctgtgatgacgttc
aagtactcagggggagcaggcaaggtggagggctactatcgggacctgaccctgggagtg
catgttgacatagaaccctctgtgttcttcaccagagtcagcacactaccagccaccaga
acccgtcagtgccacctgctgctggacgtgttcaattcaacagaacatgagctgacggtc
agcgccaacaacaaccaggacctggtgctgcacgcctcagagtgtcagaggatggcgatc
caggtggataagtttgactttgacactttgccccagccagaccaggaggccttgcgctac
accaaccccaaactactggaggaggagaggcttcacgcccaggcctctatgatcaacagc
accctgggcatcacctggaacatcccgtctgtccgtcgccagggagaggccagtgtggag
ggagtcctcaaccagttggtcctcgagcacctgcagctggcacctctacagtgggacgtg
gtggtgaacgggaaaccgtgtgactgtgacctcatcgccgactgtagggtgggcgacgcc
gtgccattggaggtgaaactgaccaatcgtagtaagaacgcggtcggaccgttcgccctg
accgtggttcccttccaggactaccagaacggagttcagaactatgacctgcaggacgca
gtcaccttcataggatctaacaccttctacatagacacggtgaagcccacagagaactct
gtgtgtatgggcgccctcctgttcctctacactggagacttctacctcaacatcaagttc
caggatgacagtgctggccagggaaaggagctgcccccatcctggttcggcctgcccagc
gtgcacatcaaagccctggaggcacccatagaggctggggcatag
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