Oncorhynchus tshawytscha (Chinook salmon): 112264671
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Entry
112264671 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 2-like isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112264671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264671
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112264671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
C1_2
SOS1_NGEF_PH
PH
Prok-RING_1
Pinin_SDK_N
PHDvar_NSD
PHD
Motif
Other DBs
NCBI-GeneID:
112264671
NCBI-ProteinID:
XP_042151440
UniProt:
A0AAZ3SLZ2
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All DBs
Position
LG13:complement(30537330..30630844)
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AA seq
1205 aa
AA seq
DB search
MTSFDLWGSSELFSSGVWALRNLIHRMPTIPPSSLDAHPPAFPPFSFTTPPAPPCSPYPS
PPCSPGPGVKGIGGSGGVTLRSPATRHLTHLDPWRRHSWEPGAVVTVQQQGMEPSDNHSV
SLENLDPEEMEKVLGAALGVRRVGRNPITQEGSLSSLTEEEAGSDLQHYSVLEEQSNQLQ
GCSASAPTLSVVRRSNPPSTGPRPVSNCYETLPYSQIGGSTQSVDRDLGLLLWGREGSWS
EVTRDEAQEEVTGGPFVRTFSFLRKMAGNRKNKEKERMREREREARDREARYSNGHLFTS
LTVSGTTLCSACNKSITAKEALSCPTCSVTIHNRCRDTLPNCAKMKQRQQKMALMRNNSA
LQSVTLRTKTPMMRERPSSAIYHSDNLRQSLLGSRRGRSGLSLSKSVSTNNIAGNLNDDS
PLGLRRILSQSTDSLNFRNRAMSMESLNDEGEVYYASMLEEMEIEGRDFEADSWSMAVDS
GYLQTHRKDIIKRQDVIYELIQTELHHVRTLRIMERVFRQGMLEEVQLEPGVVHAIFPCL
DRLTGIHVRFLAQLLTRRNHSLQTGSTYNFTIHQLGDVLLEQFSGQCADEMRKTYAEFCS
RHLKAVKLYKELLARDKRFQYFIRRVCRGHLLRRHGVQECILLVTQRITKYPVLIQRILD
NTKDNEEEASCLTQSLTQIRELLSSVDQQVMELERTHRLQEIRARLDPRVEAKVRDGGLF
RGGELLRRRLIHEGTLLWKTPGSRLKDVQVLLMTDILVFLQEKDQRFIFPCLDKSPVLSL
QNLMIREIANQERGLFLISDSSPPEMYEVHAASKDDKNTWIRIIQHTVSSCPSREEFPLI
ETEDKALLRRLKADIQQKDREVLELLQERVTLFSDLAEVTGGQEVMLPGGPNSRNLFRAD
TPHAPLGERLLTDAIAEVDRLSELLLGSTFEMPLPCSFNGHPNHTGALVINGQEVVVNGT
HRSPAAKDRNGNQAGDRPSTEEAYQRLVNLSAYLHALQGTVIKQDSILELCLRSEGPPVD
TPTTPTGRVWHSLSRDAGMAEASTGVAIGELALLQRQHSLLQEELSRLRGTEGRLRDSEK
ARAQLERQVRDMKAHSATMMDSVGTEQAPPLRRASDTNADTQLASQESIEHLEGHHDGSD
LEVEVTSDEEEEEAKASPRSESPHDLQDIPEESEATAELPREPDVSHCSPTLKNRPTRTT
ELNLK
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctttgacctgtgggggagcagtgaactattctcctctggagtatgggccctg
agaaacctgatccacaggatgccgaccatccctccctcctccctcgacgcccacccacca
gctttcccgcccttttcctttaccacaccacccgcccccccctgttccccgtatccctcc
ccaccatgctctccagggcctggggtgaaggggattggagggtccggaggggtgaccctg
cgttctccagccactcgtcacctcacccacctggacccctggaggaggcatagctgggag
cccggggctgtggtgacagtgcagcagcaggggatggagcccagcgacaaccacagtgtg
agtctggagaacctggatccggaggagatggagaaggttctgggagcggcgctgggcgtc
cggcgagtggggaggaaccccatcactcaggagggctccttgtcttccctcacggaggag
gaggcagggtccgacctgcagcactactccgtattggaggaacagtccaaccagctgcag
ggctgcagtgcgtcggccccaaccctcagtgtggtgcgtcgcagcaaccctcccagcacg
ggcccccgaccagtctccaactgctacgagactttaccctacagtcaaattggaggatcc
acacagagtgtggatagggacctgggtcttctgctctgggggagagagggaagctggtcg
gaggtcacgagagacgaggcccaggaggaggtgacaggcggcccttttgtgcgcaccttc
agtttcctacgcaagatggccggcaaccgcaagaataaggagaaggaacgcatgagggag
agggagagggaggcgcgggacagggaggcgcgctacagcaacgggcatctcttcacctcc
ctcaccgtgtcggggaccaccctctgttcagcatgcaacaagagcatcactgccaaggag
gccctcagctgccccacctgcagtgtaaccatccacaaccgctgtcgagacacgttgcca
aactgtgccaaaatgaaacagaggcaacagaagatggctctcatgaggaacaactcagct
ctgcagagcgtgacccttcgtaccaaaacccccatgatgagggaacgccccagctccgcc
atctaccactctgacaatctccgccaatccttgctgggctcgcgccgcggacgctccggc
ctttccctctccaagagtgtctccaccaataacattgcagggaacctgaatgatgactct
cccttggggctgcgcaggatcctgtcccagtccacagactcgctcaacttcaggaacaga
gctatgtccatggagtcgctcaacgacgagggagaagtgtactatgcctccatgctggag
gaaatggagattgaggggcgggattttgaggcggactcatggagcatggcggtggactcg
ggctacctgcagacgcatcgcaaagacatcatcaagaggcaggacgtcatctatgagctg
atccagacagagctgcaccacgtgcggacacttcgcattatggagcgggtgttccgccag
ggcatgctggaggaggtgcagctggagccaggcgtggtgcacgccatcttcccctgcctg
gaccgcctcactggcatccatgtacgcttcctggcacagctgctcacacggcgcaaccac
agcctgcagactggcagcacctacaacttcactatccaccagctgggagatgtgctgctg
gaacagttctcgggccagtgtgctgacgagatgagaaagacctacgctgagttctgcagc
cgccacctgaaggctgtcaagctgtacaaggagctgctggccagagacaagaggttccag
tacttcatacggcgggtgtgtcggggtcacctgttgcgtcgccatggcgtccaggagtgc
atcctgttggtcactcaacgcatcaccaagtaccctgtcctcatccagcgtatccttgac
aacaccaaggacaatgaagaggaggcctcctgtctgacccagtctctgacccagatcagg
gagctacttagctcagtggaccagcaggtgatggagctggagcggactcatcggctgcag
gagatccgggccaggctggacccacgggttgaggccaaggtgagggacgggggcctgttc
aggggaggagagttgctccgcaggagactcatccatgagggaacgctgctctggaagacc
cctgggtccaggctcaaagatgtgcaggtcctgctgatgacagacatcctagtgttccta
caggaaaaagaccagaggttcatcttcccttgtctagacaagtctccggtcctctccctg
cagaacctcatgattagggagatagccaatcaggagcgagggctcttcctcatcagtgac
tcctctcctccggagatgtacgaggtccatgctgcctcaaaagatgacaagaacacctgg
atacgcatcatacagcacactgtcagcagttgtccttccagggaagagttcccactcata
gagactgaagacaaggcccttctgagacgactgaaagcggacatccagcagaaggaccgg
gaggtgctggagctgctccaggagcgggtcacattgttctcggacctggctgaggtgacg
gggggtcaggaggtcatgctgccggggggccccaactcccggaacctgttccgggccgac
acgccccatgcgccactcggcgagagattgctcactgatgccatcgcagaggtggatagg
ctgagtgagctactcctgggctccacctttgaaatgcctctgccctgcagtttcaacggt
cacccgaaccacacaggggcgctagtgatcaacggtcaggaggtggttgtcaatggaacg
cacaggtccccagcagcaaaggaccggaatgggaatcaggctggagataggccctcaact
gaggaagcgtatcagaggctggtcaaccttagtgcataccttcatgcccttcagggcacc
gtgatcaagcaggactccatcctggagctctgcctgcgctctgaaggcccaccagtcgac
accccgaccacgcccaccggacgggtctggcactccctgtcacgtgacgcgggcatggct
gaggccagcacgggggtggccatcggggagctggccctgctccagaggcagcacagcctc
ctgcaggaggagctcagtaggctgcggggtaccgagggccgcctgagggatagcgaaaag
gcccgcgcccagctggagaggcaggtccgcgacatgaaggcccacagtgccactatgatg
gacagtgtgggaactgagcaggctccaccccttcgcagagcaagtgacaccaacgcagac
acccaattggccagccaggagtcaatcgagcatttggaagggcatcatgatggcagtgac
ctggaggtggaggtgacgtcagatgaggaggaggaggaggccaaagcatcaccgcgctcg
gagagtcctcatgatcttcaggacattccagaggagagtgaagccacagcagaactacca
cgagagcctgacgtgtcacactgctcccctactctcaaaaataggccgacgaggacaaca
gaactgaacttgaaatag
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integrated database retrieval system
