Oncorhynchus tshawytscha (Chinook salmon): 112264675
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Entry
112264675 CDS
T05605
Name
(RefSeq) transcriptional repressor p66-beta isoform X1
KO
K23194
transcriptional repressor p66
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112264675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112264675
03036 Chromosome and associated proteins [BR:
otw03036
]
112264675
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112264675
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
112264675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P66_CC
GATA
FAM76
Motif
Other DBs
NCBI-GeneID:
112264675
NCBI-ProteinID:
XP_024297210
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All DBs
Position
LG13:30829486..30880910
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AA seq
669 aa
AA seq
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MERMSEEALRLNLLKRGLETSEEREEALAKRLKMEGHEAMEHLKMLALLKRKDLAALEGA
AVAAGSLDGGKGGLGGSHHHQSMLAGAAAAYEEKMNGRLGGHGGPSKNGKENMVDEPVDF
SARRGDVDRERHTPSPDVIILSDNEASSPRGTPHPEERLHQANLEIFKGKTGEERQQMIK
ALREELRLEEARLVLLKKLRQSQIQKENVVQKVPVVQNTPSLVQPSPIHSSQGMGKLPVR
PGMHTPEPQNFRTAQGQTVIRSGANASLPPMMMSQRVIAPNPSQLHGQRMPSKPGMGRSS
TGSMSNISYQQATSQQVAASQRSGSSAIYMNLAHMQAAGAGGVGGVGMGGSGMGAVSPST
ISSGTGGGSSSGVSSLADQASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAANS
EFIYMVGLEEVVQSVIDSQGKLRGTLSRMEPFFCGQCRIDFTPHWKQEKGGRILCEQCMT
SNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPSTAQTVPNVSKAETMIRHH
ALRQAPQPQASMQRGLSSSARGVLSNFAQASQLSVASGLLGMTGKQRCGGGGGSSSGGGG
SSRIQHDGRRQIYNIPGGFLRTPYGLNIAYLNQGGVGAHKGSSLADRQREYLLDMIPPRS
ISQSINGQK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgtctgaggaggcgctgcggctgaaccttctcaagcggggcctggagacg
tccgaggagcgtgaagaggccctggccaagcgccttaagatggagggccacgaggctatg
gagcacctcaagatgctggccctgctcaagcgcaaggacctggctgctttggaaggggca
gcagtggcagccgggtccctggacggcgggaaaggcggactgggggggagccaccaccac
cagagtatgctggcgggcgcggcggcggcctatgaggagaagatgaacgggaggctgggg
ggccacggagggccgagtaagaacggcaaggagaacatggtggacgaaccagtggacttc
agtgccagaagaggcgatgtggaccgtgagcgacacactccgtccccggacgtgatcatc
ctgtcggacaacgaggcttccagtcccagggggacgccccacccagaggagaggctgcac
caggccaacctggagatcttcaaggggaagactggcgaggagcggcagcagatgatcaag
gctctgagggaagagctgcgtctggaggaggcccgtctggtgctgctcaagaagcttcgg
cagagccagatccagaaggagaatgtcgtgcagaaggtaccagtggtccagaataccccc
tctttagtgcagccatcccccatccacagttcacaggggatgggaaagctgccggtgcgc
cctggcatgcacaccccggagccccagaactttcgcactgcacagggtcaaacagtcatc
aggtcgggggccaatgcctccctgccaccgatgatgatgtcacagagggtcatcgccccc
aacccatcccagctacatggccagagaatgccctccaagcctggcatgggccgctccagc
acgggcagtatgagcaacatcagctaccagcaggccaccagccagcaggtggcggcgtcc
cagcgttcgggttcctctgcaatctacatgaacctggcccacatgcaggcggcaggggct
ggtggtgtgggcggtgtggggatgggcggcagtgggatgggcgctgtcagcccttccacc
atatcgagcggcacaggtggcggcagcagctccggcgtgagttccctggcggaccaggcc
agcagccaggcggcagccaagctggccttgcgcaaacagctggagaagaccctactggag
attcccccacccaagcctccagccccactgctgcacttcctgccgtcggccgccaacagc
gagttcatctacatggtaggcctggaagaggtggtgcagagcgtcatcgacagccagggt
aagctgcgggggacgctgtcgcgcatggagcccttcttctgcggccagtgcaggatcgac
ttcacaccccactggaagcaggagaagggcgggcgtatcctctgtgagcagtgcatgacg
tccaatcagaagaaggccctgaaggcggagcacaccaatagactgaagaacgcattcgtg
aaggccctgcagcaggagcaggagattgagcaaaggctccagcagcaggcggccctctca
cccagcacggctcagacagttcccaatgtcagcaaggccgagaccatgatccgacatcat
gccctgcgtcaggctccccagcctcaggcctccatgcagaggggtctctccagctcggcg
aggggcgtcctctccaacttcgcccaggcatcccagctctccgtggccagtggcctgctg
gggatgacggggaagcagcgctgcggaggaggaggtggcagcagtagtggtggcggtggc
agcagtcggatccagcatgatggccgtcgccagatctacaacatccccggtgggtttttg
agaaccccttatggattgaacattgcatacctgaaccaaggaggggttggggcccacaag
ggctccagcttagctgaccgccagagggagtacctgttggacatgatcccgccacgctcc
atatcgcagtccatcaacggacagaaatga
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