Oncorhynchus tshawytscha (Chinook salmon): 112264747
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Entry
112264747 CDS
T05605
Name
(RefSeq) GA-binding protein subunit beta-2 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112264747
03029 Mitochondrial biogenesis [BR:
otw03029
]
112264747
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
112264747
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
112264747
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
TC1
Glyco_hydro_3_C
Motif
Other DBs
NCBI-GeneID:
112264747
NCBI-ProteinID:
XP_024297307
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Position
LG13:33623642..33636189
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AA seq
403 aa
AA seq
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MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQHGHYSTAEVLLRA
GVSRDARTKVDRTPLHMAASEGHNVIVDLLVRSGADINAKDMLKMTALHWAAQNGHQRVA
ETLVKHGADVHALSKFDKTPFDIAGDIQNADLMLLLQEGMQNQVNMNAEAGMTGSSAQPQ
FIIQGIPGLPGGVVNLADLLNNINSAGDSEEAIAANSLDPGSIQHMVNEQGQRVITIVTD
QHGNLQTGGLGQPFFVTMQHGQQMLAMPANQVTEEVVEEEPQPPPARKRKLEASANHMES
GDTEQLQRQLQEANRKAQEYRQQLMCKEQEAEQYRMKLEAMSHSHTNGTSEQEEVVEEEE
EEEEEEVVVLQEGDIIIKTEELDSAEEQVTLVDSVPSHTEVIS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtggatttggggaagcggctccttgaggctgcacggaaaggccaggacgat
gaagtcaggacactcatggccaatggggctcccttcaccacagactggctcggcacatct
ccgttgcacctggccgcccaacacgggcactattccactgccgaggtgctgctcagggca
ggcgtcagcagggatgcccgaaccaaagtggacaggacccctctgcacatggctgcttca
gagggccacaatgtcatcgtggatctattagtcaggagtggcgcagacattaatgccaag
gacatgctgaagatgactgctctccactgggccgcccagaatggccaccaaagggtagcg
gagacgctcgtgaaacatggcgccgatgttcacgctctcagtaaatttgataagacgccg
tttgacatcgcaggagacattcagaatgccgaccttatgctcctactacaggagggaatg
cagaaccaggtgaacatgaacgcagaggctggcatgacggggagctcggcccagcctcag
tttatcatccagggcatcccagggctcccggggggtgtggtcaacctggcggacctcctc
aacaacatcaactcggcaggtgactcggaggaagccatagcagccaattctttggacccc
ggcagcatccagcacatggtgaatgagcaaggtcaaagggttatcaccatagtgaccgac
caacacggtaacctacagactggagggcttggtcagccattctttgtcaccatgcagcat
ggacaacagatgttggcgatgccagccaatcaagtgacagaggaggtggttgaggaggaa
ccccagcccccgcctgcccgcaagaggaaactagaggcctctgccaaccacatggagtct
ggagacacggagcagttacagaggcagctgcaggaagccaaccggaaggcccaggagtac
cggcagcagctgatgtgcaaagagcaggaagcagagcagtaccgtatgaagctggaggcc
atgtcgcacagccataccaatggcacctctgagcaggaggaagtggttgaagaggaggag
gaggaggaggaggaggaggtggtggtgctccaggagggagacatcatcattaagacggag
gagctggactcggccgaggagcaggtgacgctggtggattcggtgccctcccacaccgag
gtcatctcataa
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