Oncorhynchus tshawytscha (Chinook salmon): 112264758
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Entry
112264758 CDS
T05605
Name
(RefSeq) F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264758
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112264758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
SPOUT_MTase
DUF1043
Motif
Other DBs
NCBI-GeneID:
112264758
NCBI-ProteinID:
XP_024297332
LinkDB
All DBs
Position
LG13:complement(34249732..34284347)
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AA seq
1388 aa
AA seq
DB search
MTEENTDFPNELLESVRDAVGGKIKLTLKKRVQLEVKGDKLENRVLALASHRGFLLTARV
PTKIEQTFNYLDIQGITSNKPTQLLLEYDRGQLSLKLGSVEDVDEVVANIGTCLHRIYPG
LSPVKAMKKLTLMPPERTAALQSLWEDQATTDLGPCGGFSHMYWCLCDQLGLPFREEVQW
DVDTIYQTQDTRELNLQDFVHLENRDLVAIILVLEYNQWFTKLSTKDYKLSTDVCEQILR
VVARSSRLEEMVLENAGLRSDFAQKLANALTCNPASVLHTLNLTNNSLEDKGVSALSAQL
AKLPMGLKHLNLSKTSISQKGVNSLAQALSANPAVPTTLTHLDLCGNSLRGDDLPNLYNF
LGQPNSLATLDLSNSDCCLDQVCTALLRGSLKHLSVLNMSKSVFSHRRCKDVPHSFKQFF
GTALALSSVNLSGTKLPLEALKALLLGLGCNPNLSEVSLDLSSCELRSGGAQILEGCIAE
IPNISSLDISDNGLDSDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNLSQVLDNLVHMIQ
EEESPLTSISLADSKLKGDLSIVLNALGSNASLTRVDISGNGMGDMGAKMLAKALQINTK
LRTVMWDKNNVSLQGLQDVASALEKNQTIRFMPIPIIDAAQALKASPEKTEDALLKMERY
LLRNHETRKYLQEQAYRLQQGIVTTTTQQMMDRICVKVQDHLNSLRYTETAVVQEDMKVA
KNLMKDARNSKRLLPNLYHLRGSLGGMGGPPDMGGPIQDKLESMAGEMARVMDEQLQTLL
QSMVDTAEGLCPHVMKRSNLHQELMKASAGRMTVPHNFITTTLLEQSGVDIINKISEVKL
SVASFLSDRIVDEILESLSRSQNTLAEHLTRKAQPLLHQDSKETEVLDETVLQPEAQTQE
QRQQPAESLEEMDTCVMTPKSKRKSILCRMLRPVSVAFEMEFDLDKALEEVPIHEEDSPP
PPLSDKMPTYFDELPTMEARKLEHHTKLRPKPKKRTKPSRAPRDSICTSPPPEEVEQNGL
LGKVDEGVDEFFYKKITQLSFKRPTLRGSSNIQEGSEKKRESRKSGFLNLIKSRTSKSEK
SHGAAAITIPASATVSTVTEEPLSPKAPLRDHSEISPDRSEKPPTHEPTTEQHSESDSKG
GPHGGWHFGVPVMGRDLLAEMRKMHEKMASHKSDSSSSSDKADGKQGKPESQTSSLSPKS
KPTSITTRPPALPGTKPHPGPHSLGLLSPRTSSSHSPGDTPDSPLGNVSPKGPLPAPRLK
RAPSDCEREGETSPINVELTGDSSPFDLDHETDRSVIGGRQWSSLKSSTSVVQEVEGRER
TKSLPASERPLSMVDAAHCQSPGVFDKDDNTEEDFPPPPDTDQRQDLMPDNMEDEEEEED
TINDIVPV
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaaatacggattttcctaacgagttgctggagagtgtaagagatgccgtg
ggagggaagatcaagctcaccctgaagaagagggtgcaactggaggtcaaaggtgacaaa
ctggagaaccgagtcctggctttggcatcccatcggggctttctgcttactgcgagggtc
cccaccaagattgaacagaccttcaattacctggatatacaaggtatcactagtaacaag
cccactcagttgttgttggagtatgaccgaggtcagctgtccctgaagcttggctctgtg
gaggacgtggatgaggtggtggccaacattgggacctgtctacacaggatctatccaggc
ctgtccccagtgaaggcgatgaagaagttgaccctgatgcctcctgagaggacggccgcc
ctacagtctctctgggaggaccaggccaccacagacctaggcccatgtggtggtttctcc
catatgtactggtgtctctgtgaccagctgggtctgccgttcagagaggaggtgcagtgg
gatgtggacacaatctatcaaacccaggacaccagagaactgaacctgcaggatttcgta
catcttgagaacagagatttggtggccatcattctggtcctggaatataaccaatggttc
accaagctctccacaaaggactacaaactgtccacagatgtgtgtgaacaaattctgcga
gttgtggcccgctctagtcgattagaggagatggttttagagaatgcaggtctcagaagt
gatttcgcacagaagttagccaacgctctgacctgcaaccctgcctctgtacttcacacc
ctcaacctcacaaacaactccctggaggacaagggtgtatctgctctcagtgcacagcta
gccaaactcccaatgggtctcaagcatttgaacctctcaaagacctccatatcacaaaaa
ggggttaacagtcttgcccaggcgctgagtgccaaccctgctgtccctactaccctcaca
cacctggacctctgtgggaactcactccgaggagacgacctcccaaatctgtacaatttc
ctgggtcaacctaacagtctagcaactctggacctgtccaacagcgactgctgtctggac
caagtctgcactgcacttctacgaggctctctcaagcacctctcagtgctcaacatgtct
aagagcgttttctctcacaggcgatgtaaagatgtgccgcattccttcaagcagttcttt
ggcactgccctggctctgagcagtgtcaacctgtctggaaccaagctccccctggaggcg
ctcaaggcacttttactaggtcttggctgcaatcctaatctaagtgaagtttcactggat
ctcagcagctgtgagctaagatctggaggtgctcagattctggagggctgcatagctgag
attcccaacatctccagcctggacatctcagacaacggtttggattcagacctgaccact
ctcttggtgtggctggccaaaaatcgctccatccgccacctctcactgggcaagaacttc
aataacatcaagtccaaaaatttgtctcaagtcttggacaacctggtgcacatgatacag
gaggaggaatcgcccctgacgtccatctccctggccgactccaagctcaagggggatctg
tccatcgtactgaatgcactgggcagcaacgccagcctgacccgggtggacatcagcggc
aacggcatgggagacatgggggccaagatgctggccaaggccctgcagatcaacaccaag
ctcaggacggttatgtgggacaaaaacaatgtcagcctacaaggcctccaggatgtggca
tctgctttagaaaagaaccagactatccgcttcatgcctatccccatcatcgatgctgcc
caggcactcaaggccagccctgagaaaacagaggatgccctactaaagatggagcggtat
ctactaaggaaccacgagactcgaaaatacctccaagagcaagcttaccgtctccagcaa
ggcattgtcacgaccaccacacaacagatgatggacaggatctgtgtaaaggtgcaggac
cacctaaactccctgcggtatacggagaccgctgtcgtccaggaggacatgaaggtggcc
aagaacctcatgaaggacgccaggaactccaaaagactactgcccaacctgtaccacctg
aggggatctcttggtggcatgggcggcccccctgacatgggcggccccattcaggacaag
ctggagtccatggctggagagatggccagggtcatggatgagcagctacagacgttgtta
caatctatggttgacaccgctgagggcctctgtccccacgtgatgaagaggagcaacctg
caccaggagctgatgaaggccagtgcaggcaggatgaccgtcccccataacttcatcacc
accacactactggagcagtcaggagtcgacatcatcaacaagatcagtgaagtgaagctc
agtgtggcgtccttcctctcagaccgtatcgtggatgagatcttggaatctctgtcccgt
tcccaaaacactctggcagaacacctgaccaggaaagcgcagcctcttctccaccaggac
tcaaaagagacagaggtgctggatgagacagtgctccagcctgaggcccagacccaggag
cagaggcagcagcctgctgagagtctggaggagatggacacctgtgtgatgacacccaag
tccaagaggaagagcattctctgcaggatgctgcggcctgtctctgtggcgtttgaaatg
gagtttgacttggacaaggccctggaagaagtgcctatacacgaggaagactcgccccct
cctcccctatcggacaagatgccgacgtactttgacgagctgcccactatggaggcccgg
aagctagagcaccacaccaagctccgccccaaaccaaaaaagaggaccaagcctagccga
gcaccacgggattcaatctgcacctctccaccaccagaagaagtggagcagaacggcctg
ctgggaaaagtggatgagggtgttgatgaattcttttacaagaaaatcacccaacttagt
tttaaacgacccaccctgaggggctcctccaacatccaggagggttcggagaagaaacgg
gaatcccggaaaagcggcttccttaacctcatcaagtctcgcacctccaagtctgagaag
agccatggagcagccgccatcaccatcccggcttctgcgaccgtcagcactgtaaccgag
gagcccctatcccccaaggctccattgcgggaccactcggaaatctcccctgaccgctca
gaaaagccaccaacccatgaacccactacggaacagcactcggagagtgacagtaagggg
ggtcctcacggtggctggcactttggggtccccgtaatgggcagggacctcctggcggag
atgagaaaaatgcatgagaaaatggcctcccataagtctgactcatcttcctcttcagac
aaggcagatggtaaacaaggaaagccagagagtcaaacatcgtcattatcgccaaagtct
aagcccaccagtattacaaccagacccccagcactcccgggcaccaagccccaccctgga
ccacacagtttgggacttctgagccctcgcaccagcagcagccacagcccaggtgacacc
cctgactcccctcttggaaacgtatccccaaaaggacctctgcccgcccctcgcctgaag
agggcgccgtcagactgtgagcgggagggggagacaagccccattaatgttgaactcaca
ggagactctagcccatttgacttagaccatgagacggacaggtctgttattggcgggaga
cagtggtcttccctgaagagttccacttctgtggtacaggaagtagagggtcgagagcgc
accaagtccctccctgcatctgagagacctttgtccatggtggacgctgcccactgccaa
agccctggagtgtttgataaagacgacaacacggaggaagacttccctcctccccctgac
acggaccaaagacaggaccttatgcctgacaacatggaggatgaggaggaggaagaggac
accatcaatgacatcgtcccagtgtag
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