Oncorhynchus tshawytscha (Chinook salmon): 112264771
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Entry
112264771 CDS
T05605
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264771 (vps52)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Others
EARP complex
112264771 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
112264771 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF5740
CoV_NSP7
Cep57_MT_bd
Rubis-subs-bind
COG2
MscS_porin
Phage_GPO
COG6_N
DUF1664
Motif
Other DBs
NCBI-GeneID:
112264771
NCBI-ProteinID:
XP_024297362
LinkDB
All DBs
Position
LG13:complement(34818506..34829130)
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AA seq
724 aa
AA seq
DB search
MADRAVTAAMSDVNTTVHSTANSMAYLQDEMKPDTDAMAPLNLGDLDLTTDEFILDEVDI
HIQANLEDDLVKEALKTGVDLRQYSKQVEDELQRIEQASIKDYIKESQNIASLHNQITAC
DSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNMRLKNRQAVRSHLSQLVDELVVPG
AMIQVILESPVTEQEFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKIKAVTKIR
EFILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSY
FKSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAVLSPAEL
EGPILIPHTAQRGDCRYPYETLFRSQHYALLDNGCREFLFLSDFFMVAGNSALDLFNSVM
GKTLSLFLKSMSTYVSDCYDSIAVFLCIHIILRFRAITNKRTIPALDKYWDAVLELLWPR
FELILEMNIQSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFTSERTHTLLGQL
QVEVENFVLKMAAEFPSRRDQLIFLINNYDMMLSVLMERAADDSKEVEGFQQLLQARSQE
FIEEILSSPFGGMIAFVKESEALTEKGQLDRLKNDEARITQLVRGFSSTWKQSVEALSQD
VMRSFTNFKNGTGIIQGALTQLIQYYHGFHKVLAQPTFRSLAVRSELINLHHLMVEVKKH
KPNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggatagagcagtgactgctgctatgtccgatgtaaacacaactgtccactcaacg
gcgaattccatggcatatttacaagatgagatgaagcctgacacagatgccatggccccg
ctcaacctgggtgacttggacttgaccacagatgagttcatcttggatgaggtggacatt
cacatacaggctaatcttgaagatgacttggtgaaggaggcgttgaaaacgggagttgac
ctccggcaatactctaaacaagtggaggatgaactccaacggattgaacaagcttccatc
aaagactatatcaaggagagccagaatattgcctctctgcacaaccagatcacagcctgt
gactccatactggagcgaatggagggcatgctgagtggcttccagagtgacctctcgtcc
atcagcagtgagatccagactctgcagcagcagtcggtcagcatgaacatgcggctgaag
aacaggcaggctgtacgcagccacctcagccaactggtggatgagctggtggtgcccgga
gctatgatccaggtaatcttggagagcccggtgacagagcaggagttccttgagcagctc
catgagctcaacaacaagatcaactttgccaaagagctcagcttcagggagactttggcc
tgctctgacatccaggacattgtggaccgcctcaaaatcaaggctgtcacaaagatccga
gaatttatcctgcagaagatttattccttcagaaagcccatgaccaactaccaaatcccc
cagaacaccctcctcaagtacaggtttttctatcagttcctcttggcaaacgaaaggaca
gtggccaaggagatcagggatgaatatgtggacaccatgagtaagatctactacagttac
ttcaagtcgtacagcggcaggctcctcaaagtacagtatgaagaggtggcagacaaagat
gacttgatgggagtggaagacacggccaagaaaggtttcttctccaagccctccctgaag
agcaggaacaccatcttcaccctgggccagcggggggccgtgctgagccctgccgagctg
gaggggcccatcctcatcccccacactgcccagagaggggactgcaggtatccctatgag
acgctgttccgcagtcagcactacgccctcttggacaacggctgtcgagagttcctcttc
ctgtctgacttcttcatggtggctggaaattctgcgctggacctcttcaacagcgtcatg
ggaaagacgctcagcttgttcctgaagagcatgtccacctatgtgtcggactgctacgac
agcatcgccgtgttcctgtgtatccacatcatcctgcgtttcagagccatcacaaacaag
aggaccatcccagccctggacaagtactgggatgcggtgctggaactgctgtggcccagg
tttgagcttatcctggagatgaacattcagagcatccgcaacacggatcctcaaaaactg
ggcgtgttggacaccagaccacactatatcacacgcagatatgcagagttctcttctgcc
atagtcagcattaaccagacattcaccagcgagcgaacccacaccctccttggccaactt
caggttgaagtggagaactttgtcctgaagatggctgcagagttcccttcacgcagggac
cagctcatcttcctcatcaacaactacgacatgatgctcagtgtactcatggagagggca
gctgatgacagtaaagaggttgagggtttccaacagctcctccaggccaggagccaggag
tttattgaggagattctgtcctctccctttggtggcatgatagcatttgtgaaggagagc
gaggcgctgacagagaaagggcagctggatagactaaagaatgacgaagcccggatcacc
cagctggtcaggggtttctccagcacatggaaacagtctgtggaggctctgagtcaggac
gtcatgaggtccttcaccaacttcaagaacggcactggcatcattcagggagcgctcact
cagctgatccagtactaccatggtttccacaaggtactggcccagcccacctttcgcagc
ctggccgtgcgctctgagctcatcaatctgcaccacctcatggtcgaagtcaagaaacac
aagccgaacttctaa
DBGET
integrated database retrieval system
