Oncorhynchus tshawytscha (Chinook salmon): 112264887
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Entry
112264887 CDS
T05605
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112264887
Pattern recognition receptors [BR:
otw04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
112264887
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
112264887
NCBI-ProteinID:
XP_042151650
UniProt:
A0AAZ3RX44
LinkDB
All DBs
Position
LG13:38433493..38447187
Genome browser
AA seq
1117 aa
AA seq
DB search
MSLSVDREGGTASNMNLSGVHDTKAMRIEHQRPASPVPSCVSMKSDKSMNPPIMFREGDV
SIEQRIEHQRPASPVPSCVSMKSDKSMNPPIMFREGDVSIEQRIKQQRLDSPVPSCMSMK
NDLSMEPPLTFKEENISTVERVQQERPAITAPSCVSMKSDQSMDPPLRFRDGVVSEQIAQ
QELSRQFKTVLSSDLPEGFEMNQKELADTLEKSELALICQRELKSNLKTKYQSAFEGIAK
QGNPTLLNKIYTELYITKGGNGEVNNEHEVRQMETTTRKQARPETAIKCNDIFKPLPGQD
RPIRTVLTKGVAGIGKTVSVQKFILDWAEGKANQDVQFVFSLPFRELNLMKGEKHSLFEL
LDHFSMETKKSRISNFDKYKVLFIFDGLDECRLPLDFKRNKSCCDVTESTSVDMLLTNLI
EGNLLPSALLWITTRPAAANQIPSGCVDQVTEVRGFNDPQKEEYFRKRFSDKNLASRIIS
HMKSSRSLYIMCHIPVFCWISATVLEKMGEEGRELPQTLTEMCTHFLVFQTKQANEKYLA
KEETGPHWNKTSILSLGKLAFQQLVKGNLIFYEEDLKECGIDVREASVYSGVCTQIFREE
CGLYQVKVFCFVHLSIQEFLAAVYVFLRFSNDNENLIAKPQLIFKTFWFRKIPAIDFHKS
AVDKALESAGGHLDLFLRFLLGLSLESNHKHLRGLLTKTRSSPQSHEETVMYIKEKIREN
PSPERCINLFHCLKELNDHSLVKEIQSYLSSGNVSSEKLSPALWSALAFVLMTSEEDLEV
FDLKKYSKSEEGLLRLLPVVKASRTALLSDCGVTEEGCASLASALKSNPSHLRELDLSNN
DLKDSGVKMLSAGLQDPQCKLETLSLSGCLVTEEGCASLVSALRLNPSHLRELDLSYNHP
GYSGVRLLSARLEDPHCRLERLNVDHGGEHTMKPGLRKYAFELKLDPNTLHRNLSWSEVN
RKVTCGNGSQPYPDHPERFQDRPQVMCREGLSGRCYWEVEWSGKWVMIGVAYKGISRRGQ
HNDCVLGGNDKSWCLFCSAEHYNARHNNERTVTSSGSHRVGVYLDWVAGTLSFYMYGIST
DTLIHLHTFHTTFTEPLYPGFGVSWSKSSVSLCQIAS
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctgttgaccgagaggggggcactgcctctaacatgaatctctctggggta
catgacactaaagctatgaggatcgaacatcagagacctgcctcccctgtacccagctgt
gtgtccatgaagagtgacaaatctatgaatccacctatcatgttcagagaaggagatgtt
tccattgaacaaaggatcgaacatcagagacctgcctcccctgtacccagctgtgtgtcc
atgaagagtgacaaatctatgaatccacctatcatgttcagagaaggagatgtttccatt
gaacaaaggataaagcagcagagactagactcacctgtacccagctgcatgtccatgaag
aatgacctgtctatggaaccacctctcacatttaaagaggaaaacatttctactgtagaa
agggtccagcaggagagaccagccatcacggcacccagctgtgtgtctatgaagagtgac
cagtctatggatccacctttaaggttcagagatggagttgtttccgaacaaatagcccaa
caggagctatcaagacagttcaagacagtgctgagttcagatctccctgaaggctttgag
atgaaccagaaggagcttgctgacacactggagaaaagtgagcttgctttgatttgccaa
cgggaactcaaatctaatctaaagacgaaatatcaaagtgcatttgagggtattgctaag
caagggaacccaacacttctcaataagatctacacagaactctacatcacaaagggtgga
aatggagaggtcaataatgaacatgaggtaagacaaatggagacaacaaccaggaaacaa
gcaagaccagagacggcaatcaaatgtaatgacatcttcaaacctttacctggacaagac
agacctatcagaactgtgctgacaaagggagtcgccggcattggaaaaacagtctctgtg
cagaagttcattctggactgggctgaaggaaaagcaaatcaggatgtccaatttgtattt
tcacttccttttcgggagctgaatttgatgaaaggggaaaaacacagtttgtttgaactt
ctcgatcacttctcaatggaaacaaaaaaatcaagaatctccaactttgacaagtacaaa
gttctgttcatctttgatggtctggatgagtgccgactgcccctagacttcaagaggaac
aagagctgttgtgatgtcacagagtcgacctcagtggatatgctgctgacaaacctcatc
gagggaaatctgctgccctctgctcttctctggataactactagacctgcagcagccaat
cagatcccttcaggatgtgttgaccaggttacagaggtgcgagggtttaatgatccacaa
aaagaggaatactttagaaagagatttagtgataagaacttggccagtagaatcatctca
cacatgaagtcatcaaggagcctctacatcatgtgccacataccagtcttctgttggatc
tctgccacagttttggagaaaatgggtgaagaagggagagagttgccccagactctaact
gagatgtgcacacacttcctggtatttcagaccaaacaggcgaatgaaaagtatcttgca
aaagaagagacaggtccacactggaataaaacaagcattctgtcactgggaaaactggct
tttcagcagcttgtgaaaggcaatctaattttctatgaagaagacctgaaagagtgtggc
attgatgtcagggaagcctcagtgtactcaggagtgtgtacacagatcttcagagaggag
tgtgggctgtaccaggtcaaggtgttttgctttgtgcatctgagcattcaggagtttctg
gctgctgtatatgtgttcctcagattcagcaatgacaatgagaatctaatagccaaacca
cagttaatcttcaaaacattttggttcagaaaaatacctgcaattgacttccacaagagt
gctgtggataaagccttggagagtgcgggtggacaccttgatcttttcctccgcttcctt
ctgggcctctcactggagtcaaatcataagcacttacgaggtctactgacaaagacaaga
agcagcccacagagccatgaggaaacagtcatgtacatcaaggagaagatcagggagaat
ccctctccagagaggtgcatcaatctgttccactgtctgaaagaactgaatgaccattct
ctagtgaaggagatccaaagttacctgagctcgggaaatgtctccagtgaaaaactctca
cctgcactgtggtcagctctggcctttgtgttgatgacttcagaagaggatctggaggtg
tttgacctgaagaaatactccaaatcagaggaaggacttctgaggcttctgccagttgtc
aaagcatccagaacagctctgctgtcagactgtggagtcacagaggaaggttgtgcttct
ctggcctcagctctgaagtcaaacccctcacacctgagagagctggatctgagtaacaat
gacctgaaggattcaggagtgaagatgctctctgctggactgcaggatccacaatgtaaa
cttgagactctgagcctgtcaggctgtctggtcacggaggaaggctgtgcttctctggtc
tcagctctgaggttaaacccctcacacctgagagagcttgacctgagctacaatcaccca
ggatactcaggagtcagactgctctctgctcgactggaggatccacactgcagactggag
agactcaatgtggatcatggtggagaacacacaatgaaacctgggcttagaaaatatgcg
tttgagctcaaactggacccaaacacattacacagaaacctctcttggtctgaggtgaat
agaaaggtgacatgtgggaatgggagtcagccgtatcctgatcacccagagagatttcag
gaccgtccacaggtgatgtgtagagagggtctgtctgggcgctgttactgggaggtagag
tggagtgggaaatgggttatgataggagttgcatataaaggaatcagcaggagaggacaa
cataatgactgtgtgcttggaggcaatgacaagtcctggtgtctgttctgctctgctgaa
cattacaatgccaggcacaataatgagagaactgtcacctcctccggctcccacagagta
ggagtatatctggactgggtggccggcacgctgtccttctacatgtatggtatctccact
gatacactgatacacctgcacacattccacaccacattcactgagcccctgtatcctggg
tttggggtcagttggtccaaatcctcagtttctctgtgtcagatagcctcctga
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