Oncorhynchus tshawytscha (Chinook salmon): 112264896
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Entry
112264896 CDS
T05605
Name
(RefSeq) double-strand-break repair protein rad21 homolog A isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112264896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112264896
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
112264896
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Ortholog
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
112264896
NCBI-ProteinID:
XP_024297571
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Position
LG13:39141538..39155743
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AA seq
633 aa
AA seq
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MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIICPKVKMALRTSGHLL
LGVVRIYNRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITMPEEFHDFDQP
LPDLDDIDVTKQFTLNQSRVEEITMREEVGNLSLLQENDFADFGMDDREMMREENTFEVD
IIHGASASNLLLDPETSVAQIPDNSNHLEYDDQYKDDFGEDPMAESDGGMLVDKLLSNED
GDGIFDDPPVITESVLRLQDHDDEDDFDALSPGGPDSPDSGPAELLPAMQDQTEQTTLVH
NEEEAFALEPIDITVKETKAKRKRKLIVDNLKELDSKTIRAQLSDYSDIVTTLDLAPPTK
KLMMWKETGGVEKLFSLPAQPLWNSRVLKMFTRTLTPLVPDEMRKRRKGGEADSLDEFLK
DLENPEVPREEAMQRDIIDQTILEEPSVLQASAMEGSRTTLDESVMPPPSSTHGQKRKAQ
DTEPGLPMGTLEQATNHSGVSEQLDMTVSLPPEDSTNLSLFPELDLIEEKKDKKDGEDGS
DEDEEGQAGDQDREERRWNKRTQQMLHGLQRVMAKTGAQQISLLDLCRNNNKKQAAAKFY
SFLVLKKQQAVELNQTEPYSDIIATPGTRFHLI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgctcactttgtcctcagcaaacgtgggccgctggccaagatctggctagcg
gcccactgggataagaagctcaccaaagctcatgtgtttgaatgcaacctggagagcagt
gtggagagcatcatctgccccaaggtgaaaatggccctgcgtacgtcgggtcatctgctc
ctgggggtggtgaggatctacaacaggaaagccaagtacttgttggctgactgtaatgag
gcattcatcaagatcaagatggctttcagaccaggtgtggtggatctgccagaggagaac
agagaagctgcctacaacgccatcaccatgccagaagagttccacgacttcgaccagcca
ctaccagacctagacgatatcgatgtcaccaagcaattcacattgaaccagagtcgagtg
gaagagatcaccatgagggaggaggtgggcaacctgagcctgctgcaggagaatgacttc
gctgactttggaatggacgaccgggagatgatgcgtgaggagaataccttcgaggtggac
atcatccacggggcgtcagcctctaacctgctcctagacccagagacctcggttgcccag
atcccagacaactccaaccacctggaatacgacgaccagtacaaagatgacttcggagag
gaccccatggctgagagcgatggaggcatgctggttgacaagctcctcagtaacgaggat
ggggatggcattttcgacgaccctcccgtcatcaccgagagcgtgctgagactgcaggac
cacgatgacgaagatgactttgatgccctctcaccaggaggtccagacagcccagactca
ggcccagcggagctcctgcccgccatgcaggaccagacagagcagaccacgctggtacac
aacgaggaggaggccttcgccctggagcccatcgacatcacagtgaaggaaaccaaagcc
aagaggaagaggaagctaattgtggacaacctgaaggagctggacagcaagaccatccgt
gcccagctcagcgactactctgacatcgtcaccacgctggaccttgcgccgcccaccaag
aagctgatgatgtggaaagagactggaggcgtggagaagctcttctccctgccagcacag
cccctctggaacagcagggttctcaagatgttcacccgcaccctgacccccctggtgcca
gacgaaatgaggaagaggaggaagggaggtgaggcagacagcctggatgaattcctaaag
gacttggagaatcctgaggtgcccagagaggaggctatgcagagggacatcatcgaccag
accatcctggaggagcccagtgtgctgcaggcatcagccatggagggcagcaggaccacc
ctggacgagtcagtcatgcccccaccctcctccacgcacggccagaaacgcaaggcacag
gacacagagccaggcttgcccatgggtactctggaacaggccaccaaccattcaggcgtg
tccgagcagttggacatgacagtgtcgctgccccccgaggacagcaccaacctcagcctg
ttccccgagctcgacctgatagaggagaagaaggacaagaaggacggagaggacggctca
gacgaggatgaggagggtcaggccggtgaccaggaccgagaggagaggaggtggaacaag
agaacccagcagatgctccacggcctgcagagggtgatggccaagacaggagcccagcaa
attagcctgctggatttgtgcaggaacaacaacaagaagcaggctgccgccaagttctac
agtttcctggttctgaaaaagcagcaggcggtggagctcaaccagaccgagccatacagc
gacatcatcgccacccctggaacccgcttccacctcatctag
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