KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112264898
Entry
112264898         CDS       T05605                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF5
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112264898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112264898
Enzymes [BR:otw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112264898
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112264898
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-ANAPC11 RING_XB3-XBAT31 zf-rbx1 Prok-RING_4 zf-C3HC4_4 Baculo_IE-1 zf-UDP Rtf2 IBR_1 zf-RING_4 zf-RING_16 zf-RING_6
Other DBs
NCBI-GeneID: 112264898
NCBI-ProteinID: XP_024297574
LinkDB
Position
LG13:39161376..39167143
AA seq 202 aa
MAAADPWSSSDGGPASRGGFPDGENSNERDGPGGSGGETERKPDRATFECNICLDTARDA
VISLCGHLFCWPCLHQWLETRPSQQQCPVCKAGISREKVIPLYGRGSSSQEDPRLKTPPR
PPGQRTEPESRGPFQGFGDNGFHMSFGIGAFPFGFFTTVFNTNDPYHRADAYAADHQGNG
NNWQDSLFLFVAIFFFFWLLSV
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcggccgcggatccctggtcctcgagtgacggcgggcctgcaagcagaggagggttc
ccggatggtgagaacagcaacgagcgcgatggcccgggaggaagcggcggagagacagaa
cgcaagccagatcgggccacattcgaatgcaacatttgtttggacacagcaagggacgct
gtcatcagtttgtgcgggcacttgttctgctggccctgccttcatcaatggttggagacg
cgacccagccaacagcagtgtcctgtgtgtaaagcaggcatcagcagagagaaagtcatc
cccctctacggcagagggagctccagccaagaggaccccaggttgaaaaccccgcctcgt
cctccgggacagagaacagagccagagagcagagggcccttccaggggttcggggacaat
ggcttccacatgtcctttgggatcggtgctttccctttcggcttcttcaccacagtcttc
aacaccaatgacccctaccacagagcagacgcatatgcagctgatcaccaaggcaacggc
aacaactggcaggactctctcttcctgttcgtggccatattcttcttcttctggctgctg
agcgtgtaa

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