Oncorhynchus tshawytscha (Chinook salmon): 112264950
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Entry
112264950 CDS
T05605
Symbol
ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112264950 (ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264950 (ap4e1)
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
AP-4 complex
112264950 (ap4e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
HEAT_EZ
DUF1216
Motif
Other DBs
NCBI-GeneID:
112264950
NCBI-ProteinID:
XP_042179501
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All DBs
Position
LG01:complement(6696673..6715268)
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AA seq
1159 aa
AA seq
DB search
MSDVVEKTLSALPSLLSLDSQAGAGKLSPSSKLGNLIKGITELTSKHEEERLIKKELESI
KEQVASPNTTMRQMKEIMVRAIYCEMLGYQASFSYIHAIKLAQQGSVLEKRVGYLAVSLF
LNETDEFLLLLVNTVLKDLQSTNLIEVCMALTVVSQMFPKDMIPAILPVVEEKLTHPKEI
IRRKAVLALYKFYLIAPNQVQHIHSKFRKALCDKDPGVMTASLHIYLQLIKENPESYKDL
TGSMVTILRQVVGGKLPLDFNYHSVPAPWLQIQLLRILAYLGKEDQGTSEMMYDVLEESL
RRAEMNHNITYAILFECVKTIYTVHPKSQLLEKAAECIGNFVLSPKINLKYLGLKALTYV
VQQDANLALPHQMTIIECLDHSDVIIKRETLELLFRITNAQNVTVIVEKMLEFLRLTCDD
YSTIDLVGKVAELAEKYSPDNVWFIQTMNSVFSLGGDVMQPDIPNNFLRLLAEGVDNVED
RQLRLFAVDSYVSLLQGETAKLPQRFLQVISWVLGEYSYLREEESDPGSVMRLLARLLDQ
RHTSTETRSWVLGAMTKLCSSPVSVALARDVCERYSGSLNTVLRQKAQELMILSQDTKLR
ARVLPAEGRLESLEVDSSLSFLDGYVSEALAAGAAPYKSPHQRQEDLVQEKALSLEPYGL
SLPVSLSSCSITDRRSPTLLSMSSGLSGNSTELSHQEGSTTLKLEGVKRVWGKDGYLAQQ
QSAGETPTPLVELPSPLLSPQSPPSQTQKPSSGLEPDQEKRQLASSLFVGLGSHNSVCLM
GRAETAPRHFRRKPRGESSSGASEGSSDSSHSSRSAAVDNLLLSNLLDSTTLASEGGAAT
TTTPQQTSQRTLDHTTSNGNPHVEGTEQRVEAGGPLSLIRGNGMVAVVPPTHTQTDPQTQ
QDLHPAPALERPRDLPLTSHLPAELSGLARSEFTPLCSDQDSSLALSACRVYKEDALVLL
VFISNNNDSALHQMALQLTCKELEISCISGSPLKEVKGHSVSVCLHTVVMKRASVQVELA
GLLSYQRPLGQPQAAQFSLSLSLKHFLRPLTVSTGDYGKMWLSFSHDLKQNLQLVTTEHQ
EPLTATLDALKGKLHLHVVDIIGSEGIVACRLLQGPGQGQPCLLHCRVHADSLAVWLRSP
VPELPDSLLYHCQKALTET
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttgtcgagaagactctgtctgctctcccgagcctcctttcgctagactcg
caggcaggagctgggaaactttctccctcctccaaattagggaatctgatcaaaggaatc
accgaattgacatccaaacatgaggaggaaagacttattaaaaaggaactggagtctatc
aaggagcaggtagcgtctcccaacaccaccatgcgtcagatgaaggaaataatggtgaga
gccatctactgtgagatgctgggttaccaggcgtccttcagttacattcacgccatcaag
ctggcccagcagggcagtgtcctggagaagagagtgggttacctcgctgtatccttgttc
cttaatgaaaccgatgagtttctgctactcctggtgaacacagtcctaaaggatctgcag
agtaccaacctgatcgaggtgtgcatggctctaactgtcgtcagtcagatgtttcccaaa
gatatgatacctgccattctaccggtggtggaggagaaactcacacatccaaaggagatc
atccggaggaaagcagtcctggctctgtacaagttctacctgatcgcacctaaccaggtg
caacacatccacagcaagtttaggaaggccctgtgtgacaaagaccccggagtcatgaca
gcctctctacacatctacctacagctcatcaaggagaacccagagagttacaaggatctg
accgggagcatggtgaccatcctgaggcaggtggttggaggtaaactccccctggacttc
aactaccacagtgttcctgctccctggcttcaaatacagctgctcaggatactggcctac
ctggggaaggaagaccagggcactagtgagatgatgtatgatgtactggaggagtcatta
agaagagcagagatgaatcacaacattacttacgccattttatttgagtgtgtgaagacc
atctatacagttcatccaaagtcacaactgttggagaaagcagcagaatgtatcgggaac
tttgtcctatcgcctaagatcaacctcaaatatctgggtctgaaggctctgacgtacgtg
gtgcagcaggatgctaacctggccctgcctcaccagatgaccatcatagagtgtctggac
cactctgacgtcatcattaagcgcgagacactagagttactcttccgaatcaccaatgcc
cagaacgttacagtgatcgtcgagaagatgcttgagttcctcaggctgacctgtgacgac
tacagcactatagacctcgtggggaaagtagcagaactagctgaaaagtattccccagac
aatgtctggttcatccagactatgaactctgtgttctctctggggggagacgtgatgcag
cctgacatccctaacaacttcctgagactactggctgaaggtgttgataatgtggaggac
aggcagctgaggctatttgctgtggactcctacgtgtccttactacagggggagacggcc
aagctgccccaacgcttcctacaggtcatcagctgggtgctgggtgagtattcctacctg
agagaggaggaatcagacccaggcagcgtgatgagactgctggccagactactggaccag
agacacacctccactgagaccaggagctgggtactgggggccatgaccaagctgtgctcc
agcccagtgtctgtggccctggccagggatgtgtgtgagaggtactctgggtctctgaat
acggtgctccggcaaaaagcccaggaactgatgatccttagccaggatacaaagctccga
gccagggtactgccagccgagggcaggctagaaagcctggaggtagactcgtccctgtcc
ttcctggatggctatgtgtcggaggcgttggctgctggggcagctccttacaaatctcct
catcagaggcaggaggacctggtccaggagaaagctctgagcctggagccctatggtctg
tccctgccggtcagtctgtcgtcctgcagcatcacagacagacggtctcctactctgctc
tccatgagctccggcctgtctggaaacagcactgagctatctcaccaagaaggctctacc
actctgaagttggagggggtgaagagggtgtgggggaaggacgggtacctggcccagcag
cagagtgcaggtgagaccccaacccccctagtggagctgcccagtcccctgctgtcccct
cagagcccaccctcccagacacagaaaccctcctctggacttgagcctgaccaggagaaa
cggcagctggcctcgtcgctctttgttggcctggggtcccacaactctgtgtgtctgatg
ggccgagccgagacggcgccccgacacttcagaaggaaacccagaggggagtcatcatca
ggcgccagcgaaggctcctctgactcctcccactcgtctcgcagcgctgccgttgacaac
cttctgcttagcaacctactggactcgaccactttggcctcagaggggggtgctgctacc
accaccacacctcaacagacctcccagagaacactggaccataccactagcaatggtaac
ccccatgtagaggggacggagcagagagtagaggcaggaggacctctctctctgatcagg
ggaaatggcatggtggctgttgtaccgcccacacacacacagacagacccacaaacacaa
caagatctacacccagctccagccctagagagacccagggacctccctctcacctcccac
ctgccagcagagctctctgggctggcccgctctgagttcacccccctctgctcggaccag
gactccagcctggctctgtcagcctgtagagtgtataaagaggatgccttagtgttgctg
gtcttcatttccaacaacaatgactcggcgctccaccagatggcgctgcaactcacctgc
aaagaactggagatctcctgtatctcaggtagtccgttaaaggaggttaagggtcacagt
gtgtcggtttgtctgcacactgttgtcatgaagagagcctcagtccaggtggagctggct
gggttactgtcctaccagagacccttgggccagccccaggcagcacagttctcactgagc
ctctctctgaaacacttcctcaggccgttgactgtgtccacaggggattatgggaaaatg
tggttgtctttctctcatgacttgaagcagaaccttcaactggtaacaacagaacaccaa
gaacctctgacggccacactggacgcgctgaagggcaaactacacctccacgttgtcgac
atcatagggtcggagggcatcgtggcgtgccggctgcttcagggtccaggtcagggtcag
ccgtgtctgcttcactgtcgtgtccacgctgactctctggccgtgtggctgcgctcccct
gtccctgagctgcctgactccctcctctaccactgtcagaaagccctgacggagacctga
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