Oncorhynchus tshawytscha (Chinook salmon): 112264978
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Entry
112264978 CDS
T05605
Name
(RefSeq) CUB domain-containing protein 1
KO
K06732
CUB domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
otw04090
]
112264978
CD molecules [BR:
otw04090
]
Proteins
112264978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB_CDCP1_2
CDCP1_CUB_6
CUB_CDCP1_1
CUB_CDCP1_4th
Motif
Other DBs
NCBI-GeneID:
112264978
NCBI-ProteinID:
XP_024297690
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Position
LG13:41554398..41582554
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AA seq
1041 aa
AA seq
DB search
MRLTTICAGVLLGIVILLRLNLSECLHMNVHPDKDAAVTVSSSLLLPLEQCSVCTVRGGE
NDTQTACHSSLALVPDEDITLLFNCTELPQRAFAIQIHRKIDCTKDSCSPATGAAQPSLF
PEFIRTLVWHLNVPEMTVLSLDFPSDRLKEMTEAEICQDGYQYAVTSTSTEGEVKTQTYC
RNGLVAHLDILSNATVSLQVQNGGEVNSSIFTATAKPMKKQSRMMSVTPEPDTIVTISRD
AKAKECSVCVGEGPTCNSKELVLKDAHNISVTFTCPQPQYVFSVQINRDIDCTEIACSGN
IVQAESSLFPDFNRTFTWDLKVPPGLSFQLDFPSPGMRQIPPSESCPDEHTYTIITYQRT
GPATIGMFCPDGTITTVQVLYKGRVSLQVPGDRKLEPLDFKVTVGPEIKMLAVVKVNLPR
GVSDTNFLSANYPRGFSDNDLMRWDFMVPGMHNYTVNFLNYTAPLCRKKKVMVIYDKDGE
VGIQKTLVDPQPTHRQGSFTMTMFNCETDKTKQGLSLHFRLSVMRSGHPVLCTVNLSEEE
GPFLHIEKMGSDSHCEMRKDSVVQEKITVPSGTKASLSFLDCPSEDLRLTATKTIGCQSL
DSCSVSGTLLTVPKIPMCLPTLLQSFTWHLNIPVYGTVDLLSPTGNLRQSLPGQECNGSV
SLHIAEGDGSSIGYFCSEGIIRKVQVHSNVSVTATAKDLSLNQGPFLNVSFSDEISESII
YTVQPRMGSPALLATPNWPNGMKPYSTVSWIVNLPGHLQANLLFTNISQPKCGQGHTCIK
VQTLGSPEELLSQREDEAAEDKLMVPESFYLNMSNCLPEDRHFSVLSKVTLQNTSMLLQS
SILWAVGAVVLLMLIVLAVVCLVIRKKKRTMVNEASIFVRKGNIFIPGDGMFPKTRSDNE
SHVYASIEDSMVYGHLLREPSYVGTIQAHFQGQPVDTYRTFMPLQDGVPEITETAADHEP
ELVPEKDVHRPILDPSESFMPSRPRTPINRHNSMGFMDRRMVDNELCTFKSTGDINTIRL
SGADQILEPEIFIGSDGEESI
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcactacaatttgcgctggagtgctcctgggaattgtgattttgttacgcctc
aacctgtcagaatgtctgcacatgaatgtccaccctgacaaagatgccgctgtgactgtg
tcgtcctcactgctccttccattggaacagtgttctgtgtgcacagtccgtggcggtgag
aatgacacccagacggcctgtcactcatctctggccctggtcccagatgaggacatcacc
ttgctcttcaactgcactgaactgcctcagagggcctttgccatccagatccacaggaaa
atcgattgcaccaaggactcttgcagccctgccacaggtgcagctcagccttccctcttc
ccagagttcattagaacccttgtctggcacctaaatgtgccagagatgaccgttttgagt
ttggacttccctagtgacaggctgaaggagatgactgaagcagagatctgtcaagatggc
taccagtacgctgtaaccagcaccagcactgaaggagaggtcaaaactcaaacatactgc
aggaatggccttgtggctcacttagatatactgagcaacgccacagtgtctttgcaagtt
cagaacggtggggaggtgaattcctctatattcacggccactgccaaaccaatgaagaaa
cagagccgaatgatgtcagtgaccccagagccagacactatcgtcaccatcagcagagac
gccaaagccaaagagtgcagtgtgtgtgttggggaggggcctacctgtaactccaaagaa
ctcgtcctgaaagacgcccacaacatctctgtgacgttcacctgcccacagccacaatat
gtcttcagtgtgcagatcaacagggatattgattgcacagagatcgcctgcagtgggaac
attgtccaggcggagtcctccctcttcccagacttcaacagaaccttcacctgggacctg
aaagttccacctggcctttccttccagctggacttcccatcaccgggaatgagacagatc
ccaccctctgagtcctgtcctgacgagcatacctacaccatcatcacttaccagcgcacc
gggcccgccaccatcggcatgttctgcccagatggcaccatcaccacggtccaggtgctg
tacaagggccgagtgtccctgcaggtccctggggacaggaagctggagccgctggacttc
aaggtcactgttgggccggagattaaaatgctggctgtggtaaaagtcaacctacctcgt
ggggtgtccgatacaaactttctctcagccaactaccctagaggtttctctgacaatgac
ctgatgaggtgggacttcatggtgcccggcatgcataactacacagttaacttcctgaat
tacacggcgcctctctgccggaagaagaaagtgatggtgatttacgacaaggatggagag
gtgggcatccagaagaccctggtggacccccagccaacacacaggcagggcagcttcacc
atgactatgtttaactgtgagactgacaagaccaaacagggcctgtccctacatttcagg
ctctcggtaatgaggagcggccatccagttctctgcactgtaaatctgtcagaggaggaa
gggccattcctccacattgagaagatgggctctgactcccactgtgagatgaggaaggac
tctgtggtccaggagaagatcacagttccctcaggaaccaaagcaagtctttctttcctg
gactgtccaagtgaagacctacgtctgacagccacgaaaaccataggatgccagagtttg
gactcatgctctgtgagcgggactcttctcacggtccccaaaattccgatgtgcctccct
acgctactacaaagcttcacctggcacctcaacatcccagtatatggcactgtggatcta
ctgtcccccacaggaaacctcaggcagtccctgccaggacaggaatgcaatgggagtgtc
tcccttcacatagctgagggtgatgggtcctccattggctacttctgctccgaaggcatc
attcgcaaagtccaagtgcactccaacgtctctgtcactgccacagccaaggaccttagc
ctgaatcaagggcctttcctcaatgtgtccttcagtgatgaaatctcagagagcatcata
tatactgtccagcccagaatgggttcccctgccctcctggccaccccaaactggcccaac
ggtatgaagccgtactccaccgtgtcctggatcgtcaatctgccgggccacctccaggcc
aacctgctgttcactaacatcagccagcccaagtgtggccaggggcacacgtgcatcaag
gtgcagaccctgggctctccagaggagctattgagtcaaagggaggatgaggcggcagag
gacaagctgatggtccctgagagcttctacctcaacatgtccaactgtttgccggaagac
agacacttcagtgtgctcagcaaggtcaccctacagaatactagcatgctgctccagagc
tccattctgtgggctgtgggagcagtggtgctccttatgctcattgtgctggcagtcgtc
tgcttggtgataaggaagaagaaaagaacgatggtcaatgaggcttccatcttcgtaagg
aaagggaatatcttcatcccaggcgacggcatgttccccaaaacccggtcggacaatgag
tctcatgtctacgcctccatcgaagactccatggtgtatggccacctgctccgcgagccc
agctatgtgggcaccatccaggcccacttccaaggacagccggtcgacacctaccggaca
ttcatgccgctccaggacggagtgccagagatcacagagactgctgcagaccacgagcct
gaactggtgcccgagaaagacgtgcacagacctatcctggacccgtcggaatccttcatg
ccatcaagacctcgcacgcccataaaccgtcacaacagcatgggcttcatggaccgcagg
atggtggacaatgagctgtgcacattcaagagcactggggatataaatacgattcgactg
tcgggtgcagaccaaatcctagaaccggagatcttcatcggctcggatggggaggaatcc
atttag
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